RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 MAGI2Q86UL8 1455 aa15.93■□□□□ 0.14
ECM1-201ENST00000346569 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.93■□□□□ 0.14
ECM1-201ENST00000346569 RICTORQ6R327 1708 aa15.92■□□□□ 0.14
ECM1-201ENST00000346569 PPP1R15AO75807 674 aaPredicted RBP15.92■□□□□ 0.14
ECM1-201ENST00000346569 A2MP01023 1474 aa15.91■□□□□ 0.14
ECM1-201ENST00000346569 KIF3BO15066 747 aa15.91■□□□□ 0.14
ECM1-201ENST00000346569 HECW2Q9P2P5 1572 aa15.91■□□□□ 0.14
ECM1-201ENST00000346569 FAM135AQ9P2D6 1515 aa15.9■□□□□ 0.14
ECM1-201ENST00000346569 FRMPD1Q5SYB0 1578 aa15.88■□□□□ 0.13
ECM1-201ENST00000346569 KDM4FA0A1W2PPD8 638 aa15.88■□□□□ 0.13
ECM1-201ENST00000346569 IQGAP3Q86VI3 1631 aa15.87■□□□□ 0.13
ECM1-201ENST00000346569 ZMYM4Q5VZL5 1548 aa15.87■□□□□ 0.13
ECM1-201ENST00000346569 EIF2AK4Q9P2K8 1649 aaKnown RBP15.87■□□□□ 0.13
ECM1-201ENST00000346569 RPRD2Q5VT52 1461 aaKnown RBP15.86■□□□□ 0.13
ECM1-201ENST00000346569 YEATS2Q9ULM3 1422 aa15.86■□□□□ 0.13
ECM1-201ENST00000346569 VWDEQ8N2E2 1590 aa15.86■□□□□ 0.13
ECM1-201ENST00000346569 TONSLQ96HA7 1378 aa15.85■□□□□ 0.13
ECM1-201ENST00000346569 DEPDC5O75140 1603 aa15.85■□□□□ 0.13
ECM1-201ENST00000346569 ABCA6Q8N139 1617 aa15.84■□□□□ 0.13
ECM1-201ENST00000346569 DIP2CQ9Y2E4 1556 aa15.84■□□□□ 0.13
ECM1-201ENST00000346569 L3MBTL2Q969R5 705 aa15.83■□□□□ 0.12
ECM1-201ENST00000346569 PLA2R1Q13018 1463 aa15.82■□□□□ 0.12
ECM1-201ENST00000346569 KANK1Q14678 1352 aa15.82■□□□□ 0.12
ECM1-201ENST00000346569 MROH1Q8NDA8 1641 aa15.82■□□□□ 0.12
ECM1-201ENST00000346569 ATP10AO60312 1499 aa15.82■□□□□ 0.12
ECM1-201ENST00000346569 BCORL1Q5H9F3 1711 aa15.81■□□□□ 0.12
ECM1-201ENST00000346569 PRDM15P57071 1507 aaPredicted RBP15.8■□□□□ 0.12
ECM1-201ENST00000346569 ZNF316A6NFI3 1004 aaPredicted RBP15.79■□□□□ 0.12
ECM1-201ENST00000346569 GGT6Q6P531 493 aa15.79■□□□□ 0.12
ECM1-201ENST00000346569 RNF17Q9BXT8 1623 aaKnown RBP15.79■□□□□ 0.12
ECM1-201ENST00000346569 LMTK2Q8IWU2 1503 aa15.78■□□□□ 0.12
ECM1-201ENST00000346569 PTPRTO14522 1441 aa15.77■□□□□ 0.12
ECM1-201ENST00000346569 REREQ9P2R6 1566 aa15.75■□□□□ 0.11
ECM1-201ENST00000346569 TET3O43151 1660 aa15.75■□□□□ 0.11
ECM1-201ENST00000346569 E9PCH4 1651 aa15.73■□□□□ 0.11
ECM1-201ENST00000346569 AGLP35573 1532 aa15.73■□□□□ 0.11
ECM1-201ENST00000346569 CCDC144AA2RUR9 1427 aa15.73■□□□□ 0.11
ECM1-201ENST00000346569 WASHC2CQ9Y4E1 1318 aa15.73■□□□□ 0.11
ECM1-201ENST00000346569 PPP6R1Q9UPN7 881 aa15.73■□□□□ 0.11
ECM1-201ENST00000346569 NBPF8Q3BBV2 869 aa15.72■□□□□ 0.11
ECM1-201ENST00000346569 ABCC3O15438 1527 aa15.69■□□□□ 0.1
ECM1-201ENST00000346569 EFCAB6Q5THR3 1501 aa15.69■□□□□ 0.1
ECM1-201ENST00000346569 ARHGAP31Q2M1Z3 1444 aa15.68■□□□□ 0.1
ECM1-201ENST00000346569 NPATQ14207 1427 aa15.67■□□□□ 0.1
ECM1-201ENST00000346569 TRPM2O94759 1503 aa15.67■□□□□ 0.1
ECM1-201ENST00000346569 ARHGEF40Q8TER5 1519 aa15.67■□□□□ 0.1
ECM1-201ENST00000346569 CEP152O94986 1710 aa15.66■□□□□ 0.1
ECM1-201ENST00000346569 UHRF1BP1Q6BDS2 1440 aa15.66■□□□□ 0.1
ECM1-201ENST00000346569 SPATA31E1Q6ZUB1 1445 aa15.66■□□□□ 0.1
ECM1-201ENST00000346569 RGL3Q3MIN7 710 aa15.65■□□□□ 0.1
ECM1-201ENST00000346569 DCAF11Q8TEB1 546 aa15.65■□□□□ 0.1
ECM1-201ENST00000346569 SPHKAPQ2M3C7 1700 aa15.64■□□□□ 0.09
ECM1-201ENST00000346569 SIGLEC1Q9BZZ2 1709 aa15.64■□□□□ 0.09
ECM1-201ENST00000346569 NOS1P29475 1434 aa15.63■□□□□ 0.09
ECM1-201ENST00000346569 STAC3Q96MF2 364 aa15.62■□□□□ 0.09
ECM1-201ENST00000346569 KDM2AQ9Y2K7 1162 aa15.62■□□□□ 0.09
ECM1-201ENST00000346569 CNTLNQ9NXG0 1405 aa15.62■□□□□ 0.09
ECM1-201ENST00000346569 ADAMTSL3P82987 1691 aa15.62■□□□□ 0.09
ECM1-201ENST00000346569 ZC3H13Q5T200 1668 aaKnown RBP15.61■□□□□ 0.09
ECM1-201ENST00000346569 CLTCL1P53675 1640 aa15.61■□□□□ 0.09
ECM1-201ENST00000346569 NEURL4Q96JN8 1562 aa15.6■□□□□ 0.09
ECM1-201ENST00000346569 CAMSAP1Q5T5Y3 1602 aa15.6■□□□□ 0.09
ECM1-201ENST00000346569 MLECQ14165 292 aa15.59■□□□□ 0.09
ECM1-201ENST00000346569 DIEXFQ68CQ4 756 aaKnown RBP15.57■□□□□ 0.08
ECM1-201ENST00000346569 SLC52A1Q9NWF4 448 aa15.57■□□□□ 0.08
ECM1-201ENST00000346569 PRAG1Q86YV5 1406 aa15.56■□□□□ 0.08
ECM1-201ENST00000346569 HSPA5P11021 654 aaKnown RBP15.56■□□□□ 0.08
ECM1-201ENST00000346569 EIF4G2P78344 907 aaKnown RBP eCLIP15.56■□□□□ 0.08
ECM1-201ENST00000346569 IDI1Q13907 227 aa15.56■□□□□ 0.08
ECM1-201ENST00000346569 FBXO31Q5XUX0 539 aaPredicted RBP15.56■□□□□ 0.08
ECM1-201ENST00000346569 UGGT1Q9NYU2 1555 aa15.56■□□□□ 0.08
ECM1-201ENST00000346569 ARID4BQ4LE39 1312 aaPredicted RBP15.56■□□□□ 0.08
ECM1-201ENST00000346569 CFAP65Q6ZU64 1925 aaKnown RBP15.56■□□□□ 0.08
ECM1-201ENST00000346569 ZNF326Q5BKZ1 582 aaKnown RBP15.55■□□□□ 0.08
ECM1-201ENST00000346569 HIRIP3Q9BW71 556 aaPredicted RBP15.55■□□□□ 0.08
ECM1-201ENST00000346569 ZMYM3Q14202 1370 aa15.54■□□□□ 0.08
ECM1-201ENST00000346569 PTPRMP28827 1452 aa15.53■□□□□ 0.08
ECM1-201ENST00000346569 RALGAPBQ86X10 1494 aa15.53■□□□□ 0.08
ECM1-201ENST00000346569 SYNMO15061 1565 aa15.53■□□□□ 0.08
ECM1-201ENST00000346569 MADDQ8WXG6 1647 aa15.53■□□□□ 0.08
ECM1-201ENST00000346569 PIK3C2BO00750 1634 aa15.51■□□□□ 0.07
ECM1-201ENST00000346569 RPGRIP1LQ68CZ1 1315 aa15.51■□□□□ 0.07
ECM1-201ENST00000346569 ERVK-7P63135 1459 aa15.51■□□□□ 0.07
ECM1-201ENST00000346569 NBPF1Q3BBV0 1214 aa15.51■□□□□ 0.07
ECM1-201ENST00000346569 ESF1Q9H501 851 aaKnown RBP15.51■□□□□ 0.07
ECM1-201ENST00000346569 CLTCQ00610 1675 aaKnown RBP15.5■□□□□ 0.07
ECM1-201ENST00000346569 ADGRB3O60242 1522 aa15.5■□□□□ 0.07
ECM1-201ENST00000346569 GPRASP1Q5JY77 1395 aa15.5■□□□□ 0.07
ECM1-201ENST00000346569 KIF1BO60333 1816 aa15.5■□□□□ 0.07
ECM1-201ENST00000346569 PREX1Q8TCU6 1659 aa15.49■□□□□ 0.07
ECM1-201ENST00000346569 CHGAP10645 457 aaKnown RBP15.49■□□□□ 0.07
ECM1-201ENST00000346569 CARD11Q9BXL7 1154 aa15.49■□□□□ 0.07
ECM1-201ENST00000346569 ADGRF5Q8IZF2 1346 aa15.47■□□□□ 0.07
ECM1-201ENST00000346569 SPATA31D1Q6ZQQ2 1576 aa15.47■□□□□ 0.07
ECM1-201ENST00000346569 TRPM1Q7Z4N2 1603 aa15.47■□□□□ 0.07
ECM1-201ENST00000346569 MYOM2P54296 1465 aa15.46■□□□□ 0.07
ECM1-201ENST00000346569 ROCK2O75116 1388 aaKnown RBP15.46■□□□□ 0.06
ECM1-201ENST00000346569 NRXN1Q9ULB1 1477 aa15.45■□□□□ 0.06
ECM1-201ENST00000346569 C11orf95C9JLR9 678 aaPredicted RBP15.45■□□□□ 0.06
ECM1-201ENST00000346569 USP47Q96K76 1375 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms