RNA–Protein interactions for RNA: ENST00000345254.8

SEC24C-202, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24C, Length 4,433 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-202ENST00000345254 PLEKHH2Q8IVE3 1493 aa12.54□□□□□ -0.4
SEC24C-202ENST00000345254 THOC2Q8NI27 1593 aaKnown RBP12.54□□□□□ -0.4
SEC24C-202ENST00000345254 DCAF8L1A6NGE4 600 aa12.53□□□□□ -0.4
SEC24C-202ENST00000345254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.53□□□□□ -0.4
SEC24C-202ENST00000345254 ADAMTS2O95450 1211 aa12.53□□□□□ -0.4
SEC24C-202ENST00000345254 TMEM132EQ6IEE7 984 aa12.53□□□□□ -0.4
SEC24C-202ENST00000345254 CCDC144AA2RUR9 1427 aa12.53□□□□□ -0.4
SEC24C-202ENST00000345254 ABCC2Q92887 1545 aa12.52□□□□□ -0.4
SEC24C-202ENST00000345254 NUTM2GQ5VZR2 741 aa12.52□□□□□ -0.41
SEC24C-202ENST00000345254 CEP170Q5SW79 1584 aa12.52□□□□□ -0.41
SEC24C-202ENST00000345254 EPRSP07814 1512 aaKnown RBP12.51□□□□□ -0.41
SEC24C-202ENST00000345254 ZNF330Q9Y3S2 320 aaPredicted RBP12.51□□□□□ -0.41
SEC24C-202ENST00000345254 NCOA2Q15596 1464 aa12.51□□□□□ -0.41
SEC24C-202ENST00000345254 NCKAP5LQ9HCH0 1330 aa12.51□□□□□ -0.41
SEC24C-202ENST00000345254 ANKRD50Q9ULJ7 1429 aa12.51□□□□□ -0.41
SEC24C-202ENST00000345254 ARAP1Q96P48 1450 aa12.51□□□□□ -0.41
SEC24C-202ENST00000345254 XPCQ01831 940 aaPredicted RBP12.51□□□□□ -0.41
SEC24C-202ENST00000345254 CANXP27824 592 aaKnown RBP12.5□□□□□ -0.41
SEC24C-202ENST00000345254 TMF1P82094 1093 aa12.5□□□□□ -0.41
SEC24C-202ENST00000345254 ATP10BO94823 1461 aa12.5□□□□□ -0.41
SEC24C-202ENST00000345254 IRX6P78412 446 aaPredicted RBP12.5□□□□□ -0.41
SEC24C-202ENST00000345254 U2SURPO15042 1029 aaKnown RBP12.5□□□□□ -0.41
SEC24C-202ENST00000345254 NGLY1Q96IV0 654 aa12.5□□□□□ -0.41
SEC24C-202ENST00000345254 ADAMTS12P58397 1594 aa12.5□□□□□ -0.41
SEC24C-202ENST00000345254 AMPHP49418 695 aa12.49□□□□□ -0.41
SEC24C-202ENST00000345254 CFAP53Q96M91 514 aa12.49□□□□□ -0.41
SEC24C-202ENST00000345254 EFCAB5A4FU69 1503 aa12.49□□□□□ -0.41
SEC24C-202ENST00000345254 WDR43Q15061 677 aaKnown RBP eCLIP12.49□□□□□ -0.41
SEC24C-202ENST00000345254 PHLDB1Q86UU1 1377 aa12.49□□□□□ -0.41
SEC24C-202ENST00000345254 SYTL4Q96C24 671 aaPredicted RBP12.49□□□□□ -0.41
SEC24C-202ENST00000345254 STRN4Q9NRL3 753 aa12.48□□□□□ -0.41
SEC24C-202ENST00000345254 LMTK3Q96Q04 1460 aa12.48□□□□□ -0.41
SEC24C-202ENST00000345254 PMFBP1Q8TBY8 1022 aa12.48□□□□□ -0.41
SEC24C-202ENST00000345254 RRBP1Q9P2E9 1410 aaKnown RBP12.48□□□□□ -0.41
SEC24C-202ENST00000345254 C9orf84Q5VXU9 1444 aa12.46□□□□□ -0.41
SEC24C-202ENST00000345254 TERF2IPQ9NYB0 399 aa12.46□□□□□ -0.42
SEC24C-202ENST00000345254 IDI1Q13907 227 aa12.45□□□□□ -0.42
SEC24C-202ENST00000345254 HECW1Q76N89 1606 aa12.44□□□□□ -0.42
SEC24C-202ENST00000345254 ROCK2O75116 1388 aaKnown RBP12.44□□□□□ -0.42
SEC24C-202ENST00000345254 FGD6Q6ZV73 1430 aa12.44□□□□□ -0.42
SEC24C-202ENST00000345254 FYCO1Q9BQS8 1478 aa12.44□□□□□ -0.42
SEC24C-202ENST00000345254 NEUROD2Q15784 382 aa12.43□□□□□ -0.42
SEC24C-202ENST00000345254 TNRQ92752 1358 aa12.43□□□□□ -0.42
SEC24C-202ENST00000345254 NUDCQ9Y266 331 aa12.43□□□□□ -0.42
SEC24C-202ENST00000345254 NBR1Q14596 966 aa12.42□□□□□ -0.42
SEC24C-202ENST00000345254 NOP58Q9Y2X3 529 aaKnown RBP12.42□□□□□ -0.42
SEC24C-202ENST00000345254 CC2D1BQ5T0F9 858 aaKnown RBP12.41□□□□□ -0.42
SEC24C-202ENST00000345254 MORC1Q86VD1 984 aa12.41□□□□□ -0.42
SEC24C-202ENST00000345254 PRDM11Q9NQV5 511 aa12.41□□□□□ -0.42
SEC24C-202ENST00000345254 PPP1R1BQ9UD71 204 aaPredicted RBP12.41□□□□□ -0.42
SEC24C-202ENST00000345254 UHRF1BP1Q6BDS2 1440 aa12.41□□□□□ -0.42
SEC24C-202ENST00000345254 GPRASP1Q5JY77 1395 aa12.41□□□□□ -0.42
SEC24C-202ENST00000345254 LAS1LQ9Y4W2 734 aaKnown RBP12.41□□□□□ -0.42
SEC24C-202ENST00000345254 AMOTL2Q9Y2J4 779 aa12.4□□□□□ -0.42
SEC24C-202ENST00000345254 FOXO3O43524 673 aa12.4□□□□□ -0.42
SEC24C-202ENST00000345254 NLRP6P59044 892 aa12.4□□□□□ -0.42
SEC24C-202ENST00000345254 PLCH2O75038 1416 aa12.4□□□□□ -0.42
SEC24C-202ENST00000345254 LRRC9Q6ZRR7 1453 aa12.4□□□□□ -0.42
SEC24C-202ENST00000345254 L3MBTL2Q969R5 705 aa12.4□□□□□ -0.42
SEC24C-202ENST00000345254 BIVM-ERCC5R4GMW8 1640 aa12.4□□□□□ -0.43
SEC24C-202ENST00000345254 CFAP70Q5T0N1 1121 aa12.4□□□□□ -0.43
SEC24C-202ENST00000345254 CADPS2Q86UW7 1296 aa12.4□□□□□ -0.43
SEC24C-202ENST00000345254 NLRP2Q9NX02 1062 aa12.39□□□□□ -0.43
SEC24C-202ENST00000345254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.39□□□□□ -0.434e-8■■■■□ 24.9
SEC24C-202ENST00000345254 ABTB2Q8N961 1025 aa12.39□□□□□ -0.43
SEC24C-202ENST00000345254 TSPOAP1O95153 1857 aa12.39□□□□□ -0.43
SEC24C-202ENST00000345254 FANCIQ9NVI1 1328 aa12.39□□□□□ -0.43
SEC24C-202ENST00000345254 SENP3-EIF4A1A0A087X0R7 540 aa12.38□□□□□ -0.43
SEC24C-202ENST00000345254 DDRGK1Q96HY6 314 aa12.38□□□□□ -0.43
SEC24C-202ENST00000345254 MAPK8IP3Q9UPT6 1336 aa12.38□□□□□ -0.43
SEC24C-202ENST00000345254 CHD1O14646 1710 aa12.38□□□□□ -0.43
SEC24C-202ENST00000345254 HSPA5P11021 654 aaKnown RBP12.37□□□□□ -0.43
SEC24C-202ENST00000345254 PRAM1Q96QH2 718 aa12.37□□□□□ -0.43
SEC24C-202ENST00000345254 TARBP1Q13395 1621 aaKnown RBP12.37□□□□□ -0.43
SEC24C-202ENST00000345254 ZMYM3Q14202 1370 aa12.37□□□□□ -0.43
SEC24C-202ENST00000345254 KIF14Q15058 1648 aa12.36□□□□□ -0.43
SEC24C-202ENST00000345254 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.36□□□□□ -0.43
SEC24C-202ENST00000345254 PDE3BQ13370 1112 aa12.36□□□□□ -0.43
SEC24C-202ENST00000345254 EVC2Q86UK5 1308 aa12.36□□□□□ -0.43
SEC24C-202ENST00000345254 MSH6P52701 1360 aa12.36□□□□□ -0.43
SEC24C-202ENST00000345254 C8orf37Q96NL8 207 aa12.36□□□□□ -0.43
SEC24C-202ENST00000345254 EIF3AQ14152 1382 aaKnown RBP12.36□□□□□ -0.43
SEC24C-202ENST00000345254 CCDC141Q6ZP82 1450 aa12.36□□□□□ -0.43
SEC24C-202ENST00000345254 ZNF518AQ6AHZ1 1483 aa12.35□□□□□ -0.43
SEC24C-202ENST00000345254 B4GALNT3Q6L9W6 998 aa12.35□□□□□ -0.43
SEC24C-202ENST00000345254 DHX29Q7Z478 1369 aaKnown RBP12.34□□□□□ -0.43
SEC24C-202ENST00000345254 COG3Q96JB2 828 aa12.34□□□□□ -0.43
SEC24C-202ENST00000345254 FAM135AQ9P2D6 1515 aa12.34□□□□□ -0.43
SEC24C-202ENST00000345254 ZC3H6P61129 1189 aaKnown RBP12.34□□□□□ -0.43
SEC24C-202ENST00000345254 RTF1Q92541 710 aaKnown RBP12.33□□□□□ -0.44
SEC24C-202ENST00000345254 NUP153P49790 1475 aaKnown RBP12.33□□□□□ -0.44
SEC24C-202ENST00000345254 PBRM1Q86U86 1689 aa12.33□□□□□ -0.44
SEC24C-202ENST00000345254 TRAPPC8Q9Y2L5 1435 aa12.32□□□□□ -0.44
SEC24C-202ENST00000345254 TOM1L2Q6ZVM7 507 aa12.32□□□□□ -0.44
SEC24C-202ENST00000345254 CABP2Q9NPB3 220 aa12.32□□□□□ -0.44
SEC24C-202ENST00000345254 RIMBP3CA6NJZ7 1639 aa12.32□□□□□ -0.44
SEC24C-202ENST00000345254 RIMBP3BA6NNM3 1639 aa12.32□□□□□ -0.44
SEC24C-202ENST00000345254 RIMBP3Q9UFD9 1639 aa12.32□□□□□ -0.44
SEC24C-202ENST00000345254 EHBP1L1Q8N3D4 1523 aa12.31□□□□□ -0.44
SEC24C-202ENST00000345254 ABCC10Q5T3U5 1492 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms