RNA–Protein interactions for RNA: ENST00000344893.4

AC008543.1-201, humanhuman

TSL 2 BASIC

Gene AC008543.1, Length 3,383 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008543.1-201ENST00000344893 ZBED9Q6R2W3 1325 aa12.02□□□□□ -0.49
AC008543.1-201ENST00000344893 ARID4BQ4LE39 1312 aaPredicted RBP12.01□□□□□ -0.49
AC008543.1-201ENST00000344893 C9orf84Q5VXU9 1444 aa12.01□□□□□ -0.49
AC008543.1-201ENST00000344893 MIA2Q96PC5 1412 aa12.01□□□□□ -0.49
AC008543.1-201ENST00000344893 CD109Q6YHK3 1445 aa12□□□□□ -0.49
AC008543.1-201ENST00000344893 TRAPPC8Q9Y2L5 1435 aa11.99□□□□□ -0.49
AC008543.1-201ENST00000344893 TTC37Q6PGP7 1564 aa11.99□□□□□ -0.49
AC008543.1-201ENST00000344893 NUTM2DQ5VT03 806 aaPredicted RBP11.99□□□□□ -0.49
AC008543.1-201ENST00000344893 ADCY10Q96PN6 1610 aa11.99□□□□□ -0.49
AC008543.1-201ENST00000344893 SYCP2Q9BX26 1530 aa11.99□□□□□ -0.49
AC008543.1-201ENST00000344893 WDR7Q9Y4E6 1490 aa11.98□□□□□ -0.49
AC008543.1-201ENST00000344893 SHROOM2Q13796 1616 aa11.98□□□□□ -0.49
AC008543.1-201ENST00000344893 ZCCHC11Q5TAX3 1644 aaKnown RBP11.98□□□□□ -0.49
AC008543.1-201ENST00000344893 NFKBIBQ15653 356 aa11.98□□□□□ -0.49
AC008543.1-201ENST00000344893 AKNAQ7Z591 1439 aa11.98□□□□□ -0.49
AC008543.1-201ENST00000344893 ANKRD50Q9ULJ7 1429 aa11.98□□□□□ -0.49
AC008543.1-201ENST00000344893 HFM1A2PYH4 1435 aa11.98□□□□□ -0.49
AC008543.1-201ENST00000344893 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.98□□□□□ -0.49
AC008543.1-201ENST00000344893 L3MBTL2Q969R5 705 aa11.96□□□□□ -0.49
AC008543.1-201ENST00000344893 KDM6BO15054 1643 aa11.96□□□□□ -0.49
AC008543.1-201ENST00000344893 FANCAO15360 1455 aa11.96□□□□□ -0.49
AC008543.1-201ENST00000344893 MRS2Q9HD23 443 aa11.96□□□□□ -0.49
AC008543.1-201ENST00000344893 ABCC10Q5T3U5 1492 aa11.96□□□□□ -0.5
AC008543.1-201ENST00000344893 PDE4AP27815 886 aa11.96□□□□□ -0.5
AC008543.1-201ENST00000344893 NCOA1Q15788 1441 aa11.96□□□□□ -0.5
AC008543.1-201ENST00000344893 SLC24A1O60721 1099 aa11.95□□□□□ -0.5
AC008543.1-201ENST00000344893 KDM5BQ9UGL1 1544 aa11.95□□□□□ -0.5
AC008543.1-201ENST00000344893 DCAF11Q8TEB1 546 aa11.95□□□□□ -0.5
AC008543.1-201ENST00000344893 PLCH2O75038 1416 aa11.94□□□□□ -0.5
AC008543.1-201ENST00000344893 ADGRL1O94910 1474 aa11.93□□□□□ -0.5
AC008543.1-201ENST00000344893 TCERG1O14776 1098 aaKnown RBP11.92□□□□□ -0.5
AC008543.1-201ENST00000344893 BACH2Q9BYV9 841 aa11.92□□□□□ -0.5
AC008543.1-201ENST00000344893 PLEKHH2Q8IVE3 1493 aa11.92□□□□□ -0.5
AC008543.1-201ENST00000344893 RIMBP3CA6NJZ7 1639 aa11.92□□□□□ -0.5
AC008543.1-201ENST00000344893 RIMBP3BA6NNM3 1639 aa11.92□□□□□ -0.5
AC008543.1-201ENST00000344893 RIMBP3Q9UFD9 1639 aa11.92□□□□□ -0.5
AC008543.1-201ENST00000344893 ARHGEF12Q9NZN5 1544 aa11.91□□□□□ -0.5
AC008543.1-201ENST00000344893 HSP90AA2PQ14568 343 aaPredicted RBP11.91□□□□□ -0.5
AC008543.1-201ENST00000344893 CCDC141Q6ZP82 1450 aa11.91□□□□□ -0.5
AC008543.1-201ENST00000344893 RNF123Q5XPI4 1314 aa11.91□□□□□ -0.5
AC008543.1-201ENST00000344893 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.9□□□□□ -0.5
AC008543.1-201ENST00000344893 TSPOAP1O95153 1857 aa11.9□□□□□ -0.5
AC008543.1-201ENST00000344893 SMG6Q86US8 1419 aaKnown RBP11.9□□□□□ -0.5
AC008543.1-201ENST00000344893 TCOF1Q13428 1488 aaKnown RBP11.9□□□□□ -0.51
AC008543.1-201ENST00000344893 RSPH4AQ5TD94 716 aa11.9□□□□□ -0.51
AC008543.1-201ENST00000344893 DDRGK1Q96HY6 314 aa11.9□□□□□ -0.51
AC008543.1-201ENST00000344893 PRKRIP1Q9H875 184 aaPredicted RBP11.9□□□□□ -0.51
AC008543.1-201ENST00000344893 NUDCQ9Y266 331 aa11.9□□□□□ -0.51
AC008543.1-201ENST00000344893 CDC42BPAQ5VT25 1732 aa11.9□□□□□ -0.51
AC008543.1-201ENST00000344893 ESF1Q9H501 851 aaKnown RBP11.89□□□□□ -0.51
AC008543.1-201ENST00000344893 SLC4A3P48751 1232 aa11.88□□□□□ -0.51
AC008543.1-201ENST00000344893 RRAGDQ9NQL2 400 aaPredicted RBP11.88□□□□□ -0.51
AC008543.1-201ENST00000344893 DAXXQ9UER7 740 aaPredicted RBP11.88□□□□□ -0.51
AC008543.1-201ENST00000344893 SAMD9LQ8IVG5 1584 aa11.88□□□□□ -0.51
AC008543.1-201ENST00000344893 UHRF1BP1LA0JNW5 1464 aa11.87□□□□□ -0.51
AC008543.1-201ENST00000344893 MBD5Q9P267 1494 aa11.87□□□□□ -0.51
AC008543.1-201ENST00000344893 NAP1L5Q96NT1 182 aaPredicted RBP11.86□□□□□ -0.51
AC008543.1-201ENST00000344893 STAG3Q9UJ98 1225 aa11.86□□□□□ -0.51
AC008543.1-201ENST00000344893 RRP9O43818 475 aaKnown RBP11.86□□□□□ -0.51
AC008543.1-201ENST00000344893 ITSN2Q9NZM3 1697 aa11.86□□□□□ -0.51
AC008543.1-201ENST00000344893 HSPA5P11021 654 aaKnown RBP11.85□□□□□ -0.51
AC008543.1-201ENST00000344893 SENP3-EIF4A1A0A087X0R7 540 aa11.85□□□□□ -0.51
AC008543.1-201ENST00000344893 CDC42BPBQ9Y5S2 1711 aa11.85□□□□□ -0.51
AC008543.1-201ENST00000344893 CNTLNQ9NXG0 1405 aa11.85□□□□□ -0.51
AC008543.1-201ENST00000344893 FRAT2O75474 233 aaPredicted RBP11.84□□□□□ -0.51
AC008543.1-201ENST00000344893 HSP90AA1P07900 732 aaKnown RBP11.84□□□□□ -0.51
AC008543.1-201ENST00000344893 MS4A1P11836 297 aa11.84□□□□□ -0.51
AC008543.1-201ENST00000344893 DNMT1P26358 1616 aaKnown RBP11.84□□□□□ -0.51
AC008543.1-201ENST00000344893 NBPF8Q3BBV2 869 aa11.84□□□□□ -0.51
AC008543.1-201ENST00000344893 ROCK1Q13464 1354 aa11.83□□□□□ -0.52
AC008543.1-201ENST00000344893 CFAP65Q6ZU64 1925 aaKnown RBP11.82□□□□□ -0.52
AC008543.1-201ENST00000344893 MYO5CQ9NQX4 1742 aa11.81□□□□□ -0.52
AC008543.1-201ENST00000344893 EXOC6Q8TAG9 804 aa11.81□□□□□ -0.52
AC008543.1-201ENST00000344893 FBXO31Q5XUX0 539 aaPredicted RBP11.81□□□□□ -0.52
AC008543.1-201ENST00000344893 A0A0U1RQG5 324 aaPredicted RBP11.8□□□□□ -0.52
AC008543.1-201ENST00000344893 SAFB2Q14151 953 aaKnown RBP eCLIP11.8□□□□□ -0.52
AC008543.1-201ENST00000344893 CARD11Q9BXL7 1154 aa11.8□□□□□ -0.52
AC008543.1-201ENST00000344893 KANK1Q14678 1352 aa11.79□□□□□ -0.52
AC008543.1-201ENST00000344893 CEBPAP49715 358 aaPredicted RBP11.79□□□□□ -0.52
AC008543.1-201ENST00000344893 PNNQ9H307 717 aaKnown RBP11.79□□□□□ -0.52
AC008543.1-201ENST00000344893 PREX2Q70Z35 1606 aa11.79□□□□□ -0.52
AC008543.1-201ENST00000344893 YEATS2Q9ULM3 1422 aa11.79□□□□□ -0.52
AC008543.1-201ENST00000344893 EIF4G2P78344 907 aaKnown RBP eCLIP11.78□□□□□ -0.52
AC008543.1-201ENST00000344893 ANKRD30BQ9BXX2 1392 aa11.78□□□□□ -0.52
AC008543.1-201ENST00000344893 NBPF1Q3BBV0 1214 aa11.78□□□□□ -0.52
AC008543.1-201ENST00000344893 CCDC144AA2RUR9 1427 aa11.77□□□□□ -0.53
AC008543.1-201ENST00000344893 DENND4BO75064 1496 aaPredicted RBP11.77□□□□□ -0.53
AC008543.1-201ENST00000344893 SKAP1Q86WV1 359 aa11.77□□□□□ -0.53
AC008543.1-201ENST00000344893 PZPP20742 1482 aa11.76□□□□□ -0.53
AC008543.1-201ENST00000344893 DNAJC5Q9H3Z4 198 aa11.76□□□□□ -0.53
AC008543.1-201ENST00000344893 KIAA1107Q9UPP5 1409 aa11.76□□□□□ -0.53
AC008543.1-201ENST00000344893 RRP1P56182 461 aaKnown RBP11.75□□□□□ -0.53
AC008543.1-201ENST00000344893 RBM10P98175 930 aaKnown RBP11.75□□□□□ -0.53
AC008543.1-201ENST00000344893 STK26Q9P289 416 aa11.75□□□□□ -0.53
AC008543.1-201ENST00000344893 POGKQ9P215 609 aa11.75□□□□□ -0.53
AC008543.1-201ENST00000344893 CCDC7Q96M83 1385 aa11.74□□□□□ -0.53
AC008543.1-201ENST00000344893 ABCC1P33527 1531 aa11.74□□□□□ -0.53
AC008543.1-201ENST00000344893 CLCN1P35523 988 aa11.72□□□□□ -0.53
AC008543.1-201ENST00000344893 TMEM132EQ6IEE7 984 aa11.72□□□□□ -0.53
AC008543.1-201ENST00000344893 DHX29Q7Z478 1369 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms