RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 KTN1Q86UP2 1357 aaKnown RBP31.23■■■□□ 2.59
NKX2-3-201ENST00000344586 FAM135AQ9P2D6 1515 aa31.23■■■□□ 2.59
NKX2-3-201ENST00000344586 BRD4O60885 1362 aaPredicted RBP31.23■■■□□ 2.59
NKX2-3-201ENST00000344586 HNRNPMP52272 730 aaKnown RBP eCLIP31.23■■■□□ 2.59
NKX2-3-201ENST00000344586 DCAF11Q8TEB1 546 aa31.22■■■□□ 2.59
NKX2-3-201ENST00000344586 CCDC141Q6ZP82 1450 aa31.22■■■□□ 2.59
NKX2-3-201ENST00000344586 MYBBP1AQ9BQG0 1328 aaKnown RBP31.21■■■□□ 2.59
NKX2-3-201ENST00000344586 PREX2Q70Z35 1606 aa31.21■■■□□ 2.59
NKX2-3-201ENST00000344586 TRPM1Q7Z4N2 1603 aa31.2■■■□□ 2.58
NKX2-3-201ENST00000344586 CDC42BPBQ9Y5S2 1711 aa31.19■■■□□ 2.58
NKX2-3-201ENST00000344586 SENP3-EIF4A1A0A087X0R7 540 aa31.18■■■□□ 2.58
NKX2-3-201ENST00000344586 RALBP1Q15311 655 aa31.17■■■□□ 2.58
NKX2-3-201ENST00000344586 BCL11AQ9H165 835 aa31.15■■■□□ 2.58
NKX2-3-201ENST00000344586 PRAG1Q86YV5 1406 aa31.15■■■□□ 2.58
NKX2-3-201ENST00000344586 CCDC136Q96JN2 1154 aa31.15■■■□□ 2.58
NKX2-3-201ENST00000344586 UNC13BO14795 1591 aa31.11■■■□□ 2.57
NKX2-3-201ENST00000344586 CCDC144AA2RUR9 1427 aa31.09■■■□□ 2.57
NKX2-3-201ENST00000344586 PARD3Q8TEW0 1356 aa31.08■■■□□ 2.57
NKX2-3-201ENST00000344586 MAST1Q9Y2H9 1570 aa31.07■■■□□ 2.56
NKX2-3-201ENST00000344586 SYCP2Q9BX26 1530 aa31.07■■■□□ 2.56
NKX2-3-201ENST00000344586 PLA2R1Q13018 1463 aa31.05■■■□□ 2.56
NKX2-3-201ENST00000344586 LAMC1P11047 1609 aa31.05■■■□□ 2.56
NKX2-3-201ENST00000344586 GPRASP1Q5JY77 1395 aa31.04■■■□□ 2.56
NKX2-3-201ENST00000344586 RSPH4AQ5TD94 716 aa31.03■■■□□ 2.56
NKX2-3-201ENST00000344586 A2MP01023 1474 aa31.03■■■□□ 2.56
NKX2-3-201ENST00000344586 TTC37Q6PGP7 1564 aa31.01■■■□□ 2.56
NKX2-3-201ENST00000344586 COL17A1Q9UMD9 1497 aaPredicted RBP31.01■■■□□ 2.56
NKX2-3-201ENST00000344586 NLRP13Q86W25 1043 aa31.01■■■□□ 2.56
NKX2-3-201ENST00000344586 PRDM15P57071 1507 aaPredicted RBP31.01■■■□□ 2.55
NKX2-3-201ENST00000344586 NOP58Q9Y2X3 529 aaKnown RBP30.99■■■□□ 2.55
NKX2-3-201ENST00000344586 RRP1P56182 461 aaKnown RBP30.99■■■□□ 2.55
NKX2-3-201ENST00000344586 IQGAP3Q86VI3 1631 aa30.99■■■□□ 2.55
NKX2-3-201ENST00000344586 NBPF1Q3BBV0 1214 aa30.97■■■□□ 2.55
NKX2-3-201ENST00000344586 PLXNC1O60486 1568 aa30.97■■■□□ 2.55
NKX2-3-201ENST00000344586 MYO5CQ9NQX4 1742 aa30.97■■■□□ 2.55
NKX2-3-201ENST00000344586 ARHGAP5Q13017 1502 aa30.96■■■□□ 2.55
NKX2-3-201ENST00000344586 PER1O15534 1290 aaPredicted RBP30.96■■■□□ 2.55
NKX2-3-201ENST00000344586 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.94■■■□□ 2.54
NKX2-3-201ENST00000344586 EIF2AK4Q9P2K8 1649 aaKnown RBP30.93■■■□□ 2.54
NKX2-3-201ENST00000344586 RGL3Q3MIN7 710 aa30.93■■■□□ 2.54
NKX2-3-201ENST00000344586 DISP3Q9P2K9 1392 aa30.92■■■□□ 2.54
NKX2-3-201ENST00000344586 PAK3O75914 559 aaPredicted RBP30.91■■■□□ 2.54
NKX2-3-201ENST00000344586 RCAN3Q9UKA8 241 aa30.91■■■□□ 2.54
NKX2-3-201ENST00000344586 MYT1LQ9UL68 1186 aa30.91■■■□□ 2.54
NKX2-3-201ENST00000344586 TESK2Q96S53 571 aa30.89■■■□□ 2.54
NKX2-3-201ENST00000344586 PDE3BQ13370 1112 aa30.89■■■□□ 2.54
NKX2-3-201ENST00000344586 MAGI2Q86UL8 1455 aa30.88■■■□□ 2.53
NKX2-3-201ENST00000344586 PLEKHH2Q8IVE3 1493 aa30.88■■■□□ 2.53
NKX2-3-201ENST00000344586 EXOC6Q8TAG9 804 aa30.87■■■□□ 2.53
NKX2-3-201ENST00000344586 ZMYM4Q5VZL5 1548 aa30.86■■■□□ 2.53
NKX2-3-201ENST00000344586 ATP10AO60312 1499 aa30.86■■■□□ 2.53
NKX2-3-201ENST00000344586 ERBINQ96RT1 1412 aa30.86■■■□□ 2.53
NKX2-3-201ENST00000344586 BLMP54132 1417 aaPredicted RBP30.86■■■□□ 2.53
NKX2-3-201ENST00000344586 WASHC2CQ9Y4E1 1318 aa30.86■■■□□ 2.53
NKX2-3-201ENST00000344586 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.86■■■□□ 2.53
NKX2-3-201ENST00000344586 INSRP06213 1382 aa30.85■■■□□ 2.53
NKX2-3-201ENST00000344586 ANP32AP39687 249 aaKnown RBP30.85■■■□□ 2.53
NKX2-3-201ENST00000344586 SALL2Q9Y467 1007 aaPredicted RBP30.85■■■□□ 2.53
NKX2-3-201ENST00000344586 RNF17Q9BXT8 1623 aaKnown RBP30.85■■■□□ 2.53
NKX2-3-201ENST00000344586 DUOX2Q9NRD8 1548 aa30.84■■■□□ 2.53
NKX2-3-201ENST00000344586 IPO9Q96P70 1041 aaKnown RBP30.83■■■□□ 2.53
NKX2-3-201ENST00000344586 SHROOM2Q13796 1616 aa30.82■■■□□ 2.52
NKX2-3-201ENST00000344586 CHD1O14646 1710 aa30.81■■■□□ 2.52
NKX2-3-201ENST00000344586 CC2D1BQ5T0F9 858 aaKnown RBP30.79■■■□□ 2.52
NKX2-3-201ENST00000344586 CDCA7LQ96GN5 454 aa30.77■■■□□ 2.52
NKX2-3-201ENST00000344586 PANK3Q9H999 370 aa30.77■■■□□ 2.52
NKX2-3-201ENST00000344586 ABCC2Q92887 1545 aa30.77■■■□□ 2.52
NKX2-3-201ENST00000344586 TMF1P82094 1093 aa30.74■■■□□ 2.51
NKX2-3-201ENST00000344586 TCERG1O14776 1098 aaKnown RBP30.71■■■□□ 2.51
NKX2-3-201ENST00000344586 DEKP35659 375 aaKnown RBP30.7■■■□□ 2.5
NKX2-3-201ENST00000344586 ERCC6L2Q5T890 1561 aa30.7■■■□□ 2.5
NKX2-3-201ENST00000344586 NBR1Q14596 966 aa30.69■■■□□ 2.5
NKX2-3-201ENST00000344586 MADDQ8WXG6 1647 aa30.69■■■□□ 2.5
NKX2-3-201ENST00000344586 IQGAP1P46940 1657 aa30.67■■■□□ 2.5
NKX2-3-201ENST00000344586 WDR7Q9Y4E6 1490 aa30.67■■■□□ 2.5
NKX2-3-201ENST00000344586 ZBTB47Q9UFB7 747 aaPredicted RBP30.67■■■□□ 2.5
NKX2-3-201ENST00000344586 ABCC1P33527 1531 aa30.65■■■□□ 2.5
NKX2-3-201ENST00000344586 PLCH2O75038 1416 aa30.64■■■□□ 2.5
NKX2-3-201ENST00000344586 PLIN1O60240 522 aa30.61■■■□□ 2.49
NKX2-3-201ENST00000344586 MS4A1P11836 297 aa30.61■■■□□ 2.49
NKX2-3-201ENST00000344586 PDE4AP27815 886 aa30.6■■■□□ 2.49
NKX2-3-201ENST00000344586 SPHKAPQ2M3C7 1700 aa30.59■■■□□ 2.49
NKX2-3-201ENST00000344586 TRPM2O94759 1503 aa30.58■■■□□ 2.49
NKX2-3-201ENST00000344586 ZCCHC11Q5TAX3 1644 aaKnown RBP30.58■■■□□ 2.49
NKX2-3-201ENST00000344586 TRAPPC8Q9Y2L5 1435 aa30.58■■■□□ 2.49
NKX2-3-201ENST00000344586 SYNMO15061 1565 aa30.58■■■□□ 2.49
NKX2-3-201ENST00000344586 BACH2Q9BYV9 841 aa30.57■■■□□ 2.48
NKX2-3-201ENST00000344586 CRBNQ96SW2 442 aa30.56■■■□□ 2.48
NKX2-3-201ENST00000344586 CEP152O94986 1710 aa30.56■■■□□ 2.48
NKX2-3-201ENST00000344586 ADAMTS8Q9UP79 889 aa30.55■■■□□ 2.48
NKX2-3-201ENST00000344586 EFCAB2Q5VUJ9 269 aa30.53■■■□□ 2.48
NKX2-3-201ENST00000344586 NPM2Q86SE8 214 aaKnown RBP30.53■■■□□ 2.48
NKX2-3-201ENST00000344586 PPP2R1AP30153 589 aa30.52■■■□□ 2.48
NKX2-3-201ENST00000344586 CLTCL1P53675 1640 aa30.51■■■□□ 2.48
NKX2-3-201ENST00000344586 SCAF11Q99590 1463 aaKnown RBP30.51■■■□□ 2.47
NKX2-3-201ENST00000344586 SCAPERQ9BY12 1400 aa30.51■■■□□ 2.47
NKX2-3-201ENST00000344586 AMER1Q5JTC6 1135 aaPredicted RBP30.5■■■□□ 2.47
NKX2-3-201ENST00000344586 MYOM1P52179 1685 aa30.5■■■□□ 2.47
NKX2-3-201ENST00000344586 PLEKHH1Q9ULM0 1364 aa30.5■■■□□ 2.47
NKX2-3-201ENST00000344586 ZFYVE16Q7Z3T8 1539 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms