RNA–Protein interactions for RNA: ENST00000343106.9

UBE2D3-203, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene UBE2D3, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-203ENST00000343106 CCDC144AA2RUR9 1427 aa13.3□□□□□ -0.28
UBE2D3-203ENST00000343106 SHANK2Q9UPX8 1470 aa13.29□□□□□ -0.28
UBE2D3-203ENST00000343106 RSPH4AQ5TD94 716 aa13.28□□□□□ -0.28
UBE2D3-203ENST00000343106 CROCC2H7BZ55 1655 aa13.27□□□□□ -0.28
UBE2D3-203ENST00000343106 CDC42BPAQ5VT25 1732 aa13.27□□□□□ -0.29
UBE2D3-203ENST00000343106 CCDC141Q6ZP82 1450 aa13.27□□□□□ -0.29
UBE2D3-203ENST00000343106 BRD4O60885 1362 aaPredicted RBP13.26□□□□□ -0.29
UBE2D3-203ENST00000343106 PANK3Q9H999 370 aa13.26□□□□□ -0.29
UBE2D3-203ENST00000343106 FAM135AQ9P2D6 1515 aa13.25□□□□□ -0.29
UBE2D3-203ENST00000343106 RNF123Q5XPI4 1314 aa13.25□□□□□ -0.29
UBE2D3-203ENST00000343106 NLRP13Q86W25 1043 aa13.25□□□□□ -0.29
UBE2D3-203ENST00000343106 CDCA7LQ96GN5 454 aa13.25□□□□□ -0.29
UBE2D3-203ENST00000343106 KTN1Q86UP2 1357 aaKnown RBP13.25□□□□□ -0.29
UBE2D3-203ENST00000343106 ARHGEF12Q9NZN5 1544 aa13.25□□□□□ -0.29
UBE2D3-203ENST00000343106 PER1O15534 1290 aaPredicted RBP13.24□□□□□ -0.29
UBE2D3-203ENST00000343106 EXOC6Q8TAG9 804 aa13.24□□□□□ -0.29
UBE2D3-203ENST00000343106 PRAG1Q86YV5 1406 aa13.24□□□□□ -0.29
UBE2D3-203ENST00000343106 POLR1AO95602 1720 aaPredicted RBP13.24□□□□□ -0.29
UBE2D3-203ENST00000343106 PLEKHH2Q8IVE3 1493 aa13.23□□□□□ -0.29
UBE2D3-203ENST00000343106 RCAN3Q9UKA8 241 aa13.23□□□□□ -0.29
UBE2D3-203ENST00000343106 ARHGAP5Q13017 1502 aa13.23□□□□□ -0.29
UBE2D3-203ENST00000343106 LRPPRCP42704 1394 aaKnown RBP13.23□□□□□ -0.29
UBE2D3-203ENST00000343106 PLA2R1Q13018 1463 aa13.23□□□□□ -0.29
UBE2D3-203ENST00000343106 TESK2Q96S53 571 aa13.22□□□□□ -0.29
UBE2D3-203ENST00000343106 DISP3Q9P2K9 1392 aa13.22□□□□□ -0.29
UBE2D3-203ENST00000343106 SAMD9LQ8IVG5 1584 aa13.22□□□□□ -0.29
UBE2D3-203ENST00000343106 SYCP2Q9BX26 1530 aa13.22□□□□□ -0.29
UBE2D3-203ENST00000343106 RRP1P56182 461 aaKnown RBP13.22□□□□□ -0.29
UBE2D3-203ENST00000343106 KDM5DQ9BY66 1539 aa13.21□□□□□ -0.29
UBE2D3-203ENST00000343106 PLIN1O60240 522 aa13.21□□□□□ -0.3
UBE2D3-203ENST00000343106 TMF1P82094 1093 aa13.2□□□□□ -0.3
UBE2D3-203ENST00000343106 PAK3O75914 559 aaPredicted RBP13.2□□□□□ -0.3
UBE2D3-203ENST00000343106 ARHGEF5Q12774 1597 aa13.19□□□□□ -0.3
UBE2D3-203ENST00000343106 MYT1LQ9UL68 1186 aa13.18□□□□□ -0.3
UBE2D3-203ENST00000343106 A2MP01023 1474 aa13.18□□□□□ -0.3
UBE2D3-203ENST00000343106 PARD3Q8TEW0 1356 aa13.18□□□□□ -0.3
UBE2D3-203ENST00000343106 NBR1Q14596 966 aa13.18□□□□□ -0.3
UBE2D3-203ENST00000343106 AFAP1Q8N556 730 aa13.18□□□□□ -0.3
UBE2D3-203ENST00000343106 EFCAB2Q5VUJ9 269 aa13.17□□□□□ -0.3
UBE2D3-203ENST00000343106 NOP58Q9Y2X3 529 aaKnown RBP13.17□□□□□ -0.3
UBE2D3-203ENST00000343106 NPM2Q86SE8 214 aaKnown RBP13.16□□□□□ -0.3
UBE2D3-203ENST00000343106 ERBINQ96RT1 1412 aa13.15□□□□□ -0.3
UBE2D3-203ENST00000343106 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.15□□□□□ -0.3
UBE2D3-203ENST00000343106 ANP32AP39687 249 aaKnown RBP13.15□□□□□ -0.3
UBE2D3-203ENST00000343106 TTC37Q6PGP7 1564 aa13.15□□□□□ -0.3
UBE2D3-203ENST00000343106 ADAMTS8Q9UP79 889 aa13.14□□□□□ -0.31
UBE2D3-203ENST00000343106 CDC42BPBQ9Y5S2 1711 aa13.14□□□□□ -0.31
UBE2D3-203ENST00000343106 BCL11AQ9H165 835 aa13.14□□□□□ -0.31
UBE2D3-203ENST00000343106 KNSTRNQ9Y448 316 aa13.14□□□□□ -0.31
UBE2D3-203ENST00000343106 ERCC6L2Q5T890 1561 aa13.13□□□□□ -0.31
UBE2D3-203ENST00000343106 GPRASP1Q5JY77 1395 aa13.13□□□□□ -0.31
UBE2D3-203ENST00000343106 PDE3BQ13370 1112 aa13.13□□□□□ -0.31
UBE2D3-203ENST00000343106 SKAP1Q86WV1 359 aa13.13□□□□□ -0.31
UBE2D3-203ENST00000343106 SPAG9O60271 1321 aaKnown RBP13.12□□□□□ -0.31
UBE2D3-203ENST00000343106 PREX2Q70Z35 1606 aa13.12□□□□□ -0.31
UBE2D3-203ENST00000343106 TRAPPC8Q9Y2L5 1435 aa13.12□□□□□ -0.31
UBE2D3-203ENST00000343106 COL17A1Q9UMD9 1497 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-203ENST00000343106 IPO9Q96P70 1041 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-203ENST00000343106 WASHC2CQ9Y4E1 1318 aa13.1□□□□□ -0.31
UBE2D3-203ENST00000343106 CRBNQ96SW2 442 aa13.1□□□□□ -0.31
UBE2D3-203ENST00000343106 ZBTB47Q9UFB7 747 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-203ENST00000343106 WDR43Q15061 677 aaKnown RBP eCLIP13.09□□□□□ -0.31
UBE2D3-203ENST00000343106 TRPM1Q7Z4N2 1603 aa13.09□□□□□ -0.31
UBE2D3-203ENST00000343106 PLCH2O75038 1416 aa13.09□□□□□ -0.31
UBE2D3-203ENST00000343106 PPP2R1AP30153 589 aa13.08□□□□□ -0.32
UBE2D3-203ENST00000343106 C20orf194Q5TEA3 1177 aa13.08□□□□□ -0.32
UBE2D3-203ENST00000343106 KIF3BO15066 747 aa13.07□□□□□ -0.32
UBE2D3-203ENST00000343106 CCDC146Q8IYE0 955 aa13.07□□□□□ -0.32
UBE2D3-203ENST00000343106 DUOX2Q9NRD8 1548 aa13.07□□□□□ -0.32
UBE2D3-203ENST00000343106 PDE4AP27815 886 aa13.06□□□□□ -0.32
UBE2D3-203ENST00000343106 ABCC2Q92887 1545 aa13.06□□□□□ -0.32
UBE2D3-203ENST00000343106 PRDM15P57071 1507 aaPredicted RBP13.05□□□□□ -0.32
UBE2D3-203ENST00000343106 TCERG1O14776 1098 aaKnown RBP13.05□□□□□ -0.32
UBE2D3-203ENST00000343106 AMER1Q5JTC6 1135 aaPredicted RBP13.05□□□□□ -0.32
UBE2D3-203ENST00000343106 MAGI2Q86UL8 1455 aa13.05□□□□□ -0.32
UBE2D3-203ENST00000343106 UNC13BO14795 1591 aa13.05□□□□□ -0.32
UBE2D3-203ENST00000343106 DEKP35659 375 aaKnown RBP13.05□□□□□ -0.32
UBE2D3-203ENST00000343106 CFAP70Q5T0N1 1121 aa13.05□□□□□ -0.32
UBE2D3-203ENST00000343106 E9PCH4 1651 aa13.04□□□□□ -0.32
UBE2D3-203ENST00000343106 CHGAP10645 457 aaKnown RBP13.03□□□□□ -0.32
UBE2D3-203ENST00000343106 MAST1Q9Y2H9 1570 aa13.03□□□□□ -0.32
UBE2D3-203ENST00000343106 CDCA8Q53HL2 280 aa13.02□□□□□ -0.32
UBE2D3-203ENST00000343106 CHD1O14646 1710 aa13.02□□□□□ -0.33
UBE2D3-203ENST00000343106 PLEKHH1Q9ULM0 1364 aa13.02□□□□□ -0.33
UBE2D3-203ENST00000343106 BLMP54132 1417 aaPredicted RBP13.02□□□□□ -0.33
UBE2D3-203ENST00000343106 IQGAP3Q86VI3 1631 aa13.02□□□□□ -0.33
UBE2D3-203ENST00000343106 ATP10AO60312 1499 aa13.01□□□□□ -0.33
UBE2D3-203ENST00000343106 WDR7Q9Y4E6 1490 aa13.01□□□□□ -0.33
UBE2D3-203ENST00000343106 DUSP27Q5VZP5 1158 aa13.01□□□□□ -0.33
UBE2D3-203ENST00000343106 BACH2Q9BYV9 841 aa13.01□□□□□ -0.33
UBE2D3-203ENST00000343106 GOLGA2Q08379 1002 aa13□□□□□ -0.33
UBE2D3-203ENST00000343106 APAF1O14727 1248 aa13□□□□□ -0.33
UBE2D3-203ENST00000343106 PLXNC1O60486 1568 aa12.99□□□□□ -0.33
UBE2D3-203ENST00000343106 SCAPERQ9BY12 1400 aa12.99□□□□□ -0.33
UBE2D3-203ENST00000343106 ADGRF5Q8IZF2 1346 aa12.99□□□□□ -0.33
UBE2D3-203ENST00000343106 TNNT2P45379 298 aaPredicted RBP12.99□□□□□ -0.33
UBE2D3-203ENST00000343106 LAS1LQ9Y4W2 734 aaKnown RBP12.99□□□□□ -0.33
UBE2D3-203ENST00000343106 SPINK5Q9NQ38 1064 aaPredicted RBP12.99□□□□□ -0.33
UBE2D3-203ENST00000343106 KANK1Q14678 1352 aa12.98□□□□□ -0.33
UBE2D3-203ENST00000343106 MYO5CQ9NQX4 1742 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms