RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 FGD1P98174 961 aa10.18□□□□□ -0.78
UBE4B-202ENST00000343090 PODXL2Q9NZ53 605 aa10.18□□□□□ -0.78
UBE4B-202ENST00000343090 RTF1Q92541 710 aaKnown RBP10.18□□□□□ -0.78
UBE4B-202ENST00000343090 CRBNQ96SW2 442 aa10.18□□□□□ -0.78
UBE4B-202ENST00000343090 EIF3AQ14152 1382 aaKnown RBP10.18□□□□□ -0.78
UBE4B-202ENST00000343090 CCDC144AA2RUR9 1427 aa10.18□□□□□ -0.78
UBE4B-202ENST00000343090 RRP1P56182 461 aaKnown RBP10.18□□□□□ -0.78
UBE4B-202ENST00000343090 FOXD4L1Q9NU39 408 aa10.17□□□□□ -0.78
UBE4B-202ENST00000343090 FGD6Q6ZV73 1430 aa10.17□□□□□ -0.78
UBE4B-202ENST00000343090 NFKBIBQ15653 356 aa10.17□□□□□ -0.78
UBE4B-202ENST00000343090 PMFBP1Q8TBY8 1022 aa10.16□□□□□ -0.78
UBE4B-202ENST00000343090 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.16□□□□□ -0.784e-6■■■□□ 16.6
UBE4B-202ENST00000343090 KIF7Q2M1P5 1343 aa10.16□□□□□ -0.78
UBE4B-202ENST00000343090 LRRC9Q6ZRR7 1453 aa10.15□□□□□ -0.78
UBE4B-202ENST00000343090 ARAP1Q96P48 1450 aa10.15□□□□□ -0.78
UBE4B-202ENST00000343090 A0A0U1RQG5 324 aaPredicted RBP10.15□□□□□ -0.78
UBE4B-202ENST00000343090 WASHC2CQ9Y4E1 1318 aa10.15□□□□□ -0.79
UBE4B-202ENST00000343090 NUTM2FA1L443 756 aa10.14□□□□□ -0.79
UBE4B-202ENST00000343090 CCDC7Q96M83 1385 aa10.14□□□□□ -0.79
UBE4B-202ENST00000343090 WASHC2AQ641Q2 1341 aa10.14□□□□□ -0.79
UBE4B-202ENST00000343090 MCCP23508 829 aa10.14□□□□□ -0.79
UBE4B-202ENST00000343090 RSPH4AQ5TD94 716 aa10.14□□□□□ -0.79
UBE4B-202ENST00000343090 FAM43AQ8N2R8 423 aa10.13□□□□□ -0.79
UBE4B-202ENST00000343090 HDGFP51858 240 aaKnown RBP10.13□□□□□ -0.79
UBE4B-202ENST00000343090 SYNJ1O43426 1573 aa10.13□□□□□ -0.79
UBE4B-202ENST00000343090 ELL2O00472 640 aaPredicted RBP10.13□□□□□ -0.79
UBE4B-202ENST00000343090 APAF1O14727 1248 aa10.13□□□□□ -0.79
UBE4B-202ENST00000343090 MYOM3Q5VTT5 1437 aa10.13□□□□□ -0.79
UBE4B-202ENST00000343090 COG6Q9Y2V7 657 aa10.13□□□□□ -0.79
UBE4B-202ENST00000343090 GOLGA6L4A6NEF3 574 aa10.12□□□□□ -0.79
UBE4B-202ENST00000343090 TERF2IPQ9NYB0 399 aa10.12□□□□□ -0.79
UBE4B-202ENST00000343090 SLC4A10Q6U841 1118 aa10.12□□□□□ -0.79
UBE4B-202ENST00000343090 UACAQ9BZF9 1416 aa10.12□□□□□ -0.79
UBE4B-202ENST00000343090 GAPVD1Q14C86 1478 aa10.12□□□□□ -0.79
UBE4B-202ENST00000343090 NOL8Q76FK4 1167 aaKnown RBP10.11□□□□□ -0.79
UBE4B-202ENST00000343090 GBP4Q96PP9 640 aa10.11□□□□□ -0.79
UBE4B-202ENST00000343090 CALD1Q05682 793 aaKnown RBP10.11□□□□□ -0.79
UBE4B-202ENST00000343090 CENPQQ7L2Z9 268 aaPredicted RBP10.11□□□□□ -0.79
UBE4B-202ENST00000343090 FAM161AQ3B820 660 aa10.1□□□□□ -0.79
UBE4B-202ENST00000343090 CNTLNQ9NXG0 1405 aa10.1□□□□□ -0.79
UBE4B-202ENST00000343090 TRHP20396 242 aaPredicted RBP10.09□□□□□ -0.79
UBE4B-202ENST00000343090 PTPRGP23470 1445 aa10.09□□□□□ -0.79
UBE4B-202ENST00000343090 NCOA2Q15596 1464 aa10.09□□□□□ -0.79
UBE4B-202ENST00000343090 TULP1O00294 542 aaPredicted RBP10.09□□□□□ -0.79
UBE4B-202ENST00000343090 TRIM6-TRIM34B2RNG4 842 aa10.08□□□□□ -0.8
UBE4B-202ENST00000343090 KIAA1211Q6ZU35 1233 aa10.08□□□□□ -0.8
UBE4B-202ENST00000343090 FOXD4L5Q5VV16 416 aaPredicted RBP10.08□□□□□ -0.8
UBE4B-202ENST00000343090 FOXD4L4Q8WXT5 416 aaPredicted RBP10.08□□□□□ -0.8
UBE4B-202ENST00000343090 E9PSI1 815 aa10.08□□□□□ -0.8
UBE4B-202ENST00000343090 LTV1Q96GA3 475 aaPredicted RBP10.08□□□□□ -0.8
UBE4B-202ENST00000343090 RRBP1Q9P2E9 1410 aaKnown RBP10.08□□□□□ -0.8
UBE4B-202ENST00000343090 AQRO60306 1485 aaKnown RBP eCLIP10.07□□□□□ -0.88e-7■■■□□ 16
UBE4B-202ENST00000343090 STK31Q9BXU1 1019 aa10.07□□□□□ -0.8
UBE4B-202ENST00000343090 DRC7Q8IY82 874 aa10.07□□□□□ -0.8
UBE4B-202ENST00000343090 MINK1Q8N4C8 1332 aaPredicted RBP10.07□□□□□ -0.8
UBE4B-202ENST00000343090 ZNF330Q9Y3S2 320 aaPredicted RBP10.06□□□□□ -0.8
UBE4B-202ENST00000343090 CASKIN1Q8WXD9 1431 aa10.06□□□□□ -0.8
UBE4B-202ENST00000343090 CUX1P39880 1505 aa10.06□□□□□ -0.8
UBE4B-202ENST00000343090 CDCA7LQ96GN5 454 aa10.06□□□□□ -0.8
UBE4B-202ENST00000343090 CFAP44Q96MT7 982 aa10.06□□□□□ -0.8
UBE4B-202ENST00000343090 ANKRD45Q5TZF3 282 aa10.06□□□□□ -0.8
UBE4B-202ENST00000343090 FRAT2O75474 233 aaPredicted RBP10.05□□□□□ -0.8
UBE4B-202ENST00000343090 CFTRP13569 1480 aa10.05□□□□□ -0.8
UBE4B-202ENST00000343090 NPHP1O15259 732 aa10.05□□□□□ -0.8
UBE4B-202ENST00000343090 ZKSCAN2Q63HK3 967 aa10.05□□□□□ -0.8
UBE4B-202ENST00000343090 CGNL1Q0VF96 1302 aa10.05□□□□□ -0.8
UBE4B-202ENST00000343090 PRDM2Q13029 1718 aa10.05□□□□□ -0.8
UBE4B-202ENST00000343090 NGDNQ8NEJ9 315 aaKnown RBP10.04□□□□□ -0.8
UBE4B-202ENST00000343090 CCDC184Q52MB2 194 aa10.04□□□□□ -0.8
UBE4B-202ENST00000343090 NBPF8Q3BBV2 869 aa10.04□□□□□ -0.8
UBE4B-202ENST00000343090 CSB-PGBD3P0DP91 1061 aa10.03□□□□□ -0.8
UBE4B-202ENST00000343090 AMPHP49418 695 aa10.03□□□□□ -0.8
UBE4B-202ENST00000343090 GOLGA6L6A8MZA4 724 aa10.03□□□□□ -0.8
UBE4B-202ENST00000343090 FAM13BQ9NYF5 915 aa10.03□□□□□ -0.8
UBE4B-202ENST00000343090 ANKRD50Q9ULJ7 1429 aa10.03□□□□□ -0.8
UBE4B-202ENST00000343090 ERICH3Q5RHP9 1530 aa10.03□□□□□ -0.8
UBE4B-202ENST00000343090 HMMRO75330 724 aa10.03□□□□□ -0.8
UBE4B-202ENST00000343090 ADAMTS8Q9UP79 889 aa10.03□□□□□ -0.8
UBE4B-202ENST00000343090 EVC2Q86UK5 1308 aa10.02□□□□□ -0.8
UBE4B-202ENST00000343090 ZMYND15Q9H091 742 aa10.02□□□□□ -0.8
UBE4B-202ENST00000343090 FYCO1Q9BQS8 1478 aa10.02□□□□□ -0.81
UBE4B-202ENST00000343090 CHAF1AQ13111 956 aaPredicted RBP10.02□□□□□ -0.81
UBE4B-202ENST00000343090 PANK1Q8TE04 598 aa10.02□□□□□ -0.81
UBE4B-202ENST00000343090 NCAPD3P42695 1498 aa10.01□□□□□ -0.81
UBE4B-202ENST00000343090 RRP9O43818 475 aaKnown RBP10.01□□□□□ -0.81
UBE4B-202ENST00000343090 FOXD4L6Q3SYB3 417 aaPredicted RBP10.01□□□□□ -0.81
UBE4B-202ENST00000343090 FOXD4L3Q6VB84 417 aaPredicted RBP10.01□□□□□ -0.81
UBE4B-202ENST00000343090 CHMP3Q9Y3E7 222 aa10.01□□□□□ -0.81
UBE4B-202ENST00000343090 LMOD3Q0VAK6 560 aa10.01□□□□□ -0.81
UBE4B-202ENST00000343090 NBPF1Q3BBV0 1214 aa10.01□□□□□ -0.81
UBE4B-202ENST00000343090 VGFO15240 615 aaPredicted RBP10□□□□□ -0.81
UBE4B-202ENST00000343090 PRXQ9BXM0 1461 aa10□□□□□ -0.81
UBE4B-202ENST00000343090 AKNAQ7Z591 1439 aa10□□□□□ -0.81
UBE4B-202ENST00000343090 WDR97A6NE52 1622 aa10□□□□□ -0.81
UBE4B-202ENST00000343090 PTMSP20962 102 aa10□□□□□ -0.81
UBE4B-202ENST00000343090 RIPK4P57078 832 aa10□□□□□ -0.81
UBE4B-202ENST00000343090 RILPL2Q969X0 211 aa10□□□□□ -0.81
UBE4B-202ENST00000343090 BACH2Q9BYV9 841 aa10□□□□□ -0.81
UBE4B-202ENST00000343090 TMEM132EQ6IEE7 984 aa9.99□□□□□ -0.81
UBE4B-202ENST00000343090 GNL2Q13823 731 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms