RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 FAM135AQ9P2D6 1515 aa19.62■□□□□ 0.73
SRSF3-201ENST00000339436 C3P01024 1663 aa19.61■□□□□ 0.73
SRSF3-201ENST00000339436 RRP7BPQ9NSQ0 103 aa19.61■□□□□ 0.73
SRSF3-201ENST00000339436 ZC3H13Q5T200 1668 aaKnown RBP19.6■□□□□ 0.73
SRSF3-201ENST00000339436 GCC2Q8IWJ2 1684 aa19.6■□□□□ 0.73
SRSF3-201ENST00000339436 PRDM15P57071 1507 aaPredicted RBP19.59■□□□□ 0.73
SRSF3-201ENST00000339436 CNTLNQ9NXG0 1405 aa19.58■□□□□ 0.73
SRSF3-201ENST00000339436 KDM5DQ9BY66 1539 aa19.58■□□□□ 0.72
SRSF3-201ENST00000339436 KIF3BO15066 747 aa19.57■□□□□ 0.72
SRSF3-201ENST00000339436 ITGAEP38570 1179 aa19.57■□□□□ 0.72
SRSF3-201ENST00000339436 CEP152O94986 1710 aa19.57■□□□□ 0.72
SRSF3-201ENST00000339436 ANKRD50Q9ULJ7 1429 aa19.55■□□□□ 0.72
SRSF3-201ENST00000339436 GGT6Q6P531 493 aa19.55■□□□□ 0.72
SRSF3-201ENST00000339436 UNC13BO14795 1591 aa19.53■□□□□ 0.72
SRSF3-201ENST00000339436 ABCC3O15438 1527 aa19.53■□□□□ 0.72
SRSF3-201ENST00000339436 PPP6R1Q9UPN7 881 aa19.52■□□□□ 0.72
SRSF3-201ENST00000339436 CAMSAP1Q5T5Y3 1602 aa19.52■□□□□ 0.71
SRSF3-201ENST00000339436 SETD1BQ9UPS6 1966 aaKnown RBP19.51■□□□□ 0.71
SRSF3-201ENST00000339436 VWDEQ8N2E2 1590 aa19.51■□□□□ 0.71
SRSF3-201ENST00000339436 ESF1Q9H501 851 aaKnown RBP19.51■□□□□ 0.71
SRSF3-201ENST00000339436 HFM1A2PYH4 1435 aa19.48■□□□□ 0.71
SRSF3-201ENST00000339436 NAIPQ13075 1403 aa19.48■□□□□ 0.71
SRSF3-201ENST00000339436 PREX1Q8TCU6 1659 aa19.47■□□□□ 0.71
SRSF3-201ENST00000339436 ZMYM3Q14202 1370 aa19.45■□□□□ 0.7
SRSF3-201ENST00000339436 IQGAP3Q86VI3 1631 aa19.45■□□□□ 0.7
SRSF3-201ENST00000339436 CFAP65Q6ZU64 1925 aaKnown RBP19.45■□□□□ 0.7
SRSF3-201ENST00000339436 PZPP20742 1482 aa19.45■□□□□ 0.7
SRSF3-201ENST00000339436 LMTK2Q8IWU2 1503 aa19.45■□□□□ 0.7
SRSF3-201ENST00000339436 WASHC2CQ9Y4E1 1318 aa19.45■□□□□ 0.7
SRSF3-201ENST00000339436 TET3O43151 1660 aa19.43■□□□□ 0.7
SRSF3-201ENST00000339436 NPATQ14207 1427 aa19.43■□□□□ 0.7
SRSF3-201ENST00000339436 EFCAB6Q5THR3 1501 aa19.43■□□□□ 0.7
SRSF3-201ENST00000339436 CEBPAP49715 358 aaPredicted RBP19.42■□□□□ 0.7
SRSF3-201ENST00000339436 PLPPR3Q6T4P5 718 aa19.42■□□□□ 0.7
SRSF3-201ENST00000339436 KANK1Q14678 1352 aa19.42■□□□□ 0.7
SRSF3-201ENST00000339436 MYO3AQ8NEV4 1616 aa19.42■□□□□ 0.7
SRSF3-201ENST00000339436 ZNF142P52746 1687 aaPredicted RBP19.39■□□□□ 0.69
SRSF3-201ENST00000339436 LMTK3Q96Q04 1460 aa19.39■□□□□ 0.69
SRSF3-201ENST00000339436 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.39■□□□□ 0.692e-9■■■□□ 15.8
SRSF3-201ENST00000339436 SPATA31D1Q6ZQQ2 1576 aa19.38■□□□□ 0.69
SRSF3-201ENST00000339436 ARHGAP31Q2M1Z3 1444 aa19.37■□□□□ 0.69
SRSF3-201ENST00000339436 ERVK-7P63135 1459 aa19.35■□□□□ 0.69
SRSF3-201ENST00000339436 E9PCH4 1651 aa19.35■□□□□ 0.69
SRSF3-201ENST00000339436 UHRF1BP1Q6BDS2 1440 aa19.34■□□□□ 0.69
SRSF3-201ENST00000339436 RPRD2Q5VT52 1461 aaKnown RBP19.33■□□□□ 0.68
SRSF3-201ENST00000339436 CEP170BQ9Y4F5 1589 aaPredicted RBP19.32■□□□□ 0.68
SRSF3-201ENST00000339436 NUP155O75694 1391 aa19.32■□□□□ 0.68
SRSF3-201ENST00000339436 TNRQ92752 1358 aa19.3■□□□□ 0.68
SRSF3-201ENST00000339436 FBXO31Q5XUX0 539 aaPredicted RBP19.3■□□□□ 0.68
SRSF3-201ENST00000339436 SETD5Q9C0A6 1442 aa19.29■□□□□ 0.68
SRSF3-201ENST00000339436 SYNMO15061 1565 aa19.29■□□□□ 0.68
SRSF3-201ENST00000339436 NLRP1Q9C000 1473 aa19.27■□□□□ 0.68
SRSF3-201ENST00000339436 SPHKAPQ2M3C7 1700 aa19.27■□□□□ 0.68
SRSF3-201ENST00000339436 NOS1P29475 1434 aa19.26■□□□□ 0.67
SRSF3-201ENST00000339436 A2ML1A8K2U0 1454 aa19.26■□□□□ 0.67
SRSF3-201ENST00000339436 RAB3GAP2Q9H2M9 1393 aa19.24■□□□□ 0.67
SRSF3-201ENST00000339436 UBR1Q8IWV7 1749 aa19.24■□□□□ 0.67
SRSF3-201ENST00000339436 PIK3C2BO00750 1634 aa19.23■□□□□ 0.67
SRSF3-201ENST00000339436 KDM5AP29375 1690 aaKnown RBP19.23■□□□□ 0.67
SRSF3-201ENST00000339436 STRCQ7RTU9 1775 aa19.21■□□□□ 0.67
SRSF3-201ENST00000339436 UGGT1Q9NYU2 1555 aa19.2■□□□□ 0.66
SRSF3-201ENST00000339436 MYO5BQ9ULV0 1848 aa19.2■□□□□ 0.66
SRSF3-201ENST00000339436 TRIM52Q96A61 297 aa19.2■□□□□ 0.66
SRSF3-201ENST00000339436 POLR1AO95602 1720 aaPredicted RBP19.19■□□□□ 0.66
SRSF3-201ENST00000339436 HSPA2P54652 639 aa19.19■□□□□ 0.66
SRSF3-201ENST00000339436 ACIN1Q9UKV3 1341 aaKnown RBP19.18■□□□□ 0.66
SRSF3-201ENST00000339436 ADGRB3O60242 1522 aa19.17■□□□□ 0.66
SRSF3-201ENST00000339436 TRPM2O94759 1503 aa19.17■□□□□ 0.66
SRSF3-201ENST00000339436 PLA2R1Q13018 1463 aa19.17■□□□□ 0.66
SRSF3-201ENST00000339436 PTPRTO14522 1441 aa19.15■□□□□ 0.66
SRSF3-201ENST00000339436 TRIM26Q12899 539 aaPredicted RBP19.15■□□□□ 0.66
SRSF3-201ENST00000339436 SLC4A1APQ9BWU0 796 aaKnown RBP19.14■□□□□ 0.65
SRSF3-201ENST00000339436 CLTCL1P53675 1640 aa19.14■□□□□ 0.65
SRSF3-201ENST00000339436 TMEM131LA2VDJ0 1609 aa19.13■□□□□ 0.65
SRSF3-201ENST00000339436 HRCP23327 699 aa19.11■□□□□ 0.65
SRSF3-201ENST00000339436 PKD2Q13563 968 aa19.11■□□□□ 0.65
SRSF3-201ENST00000339436 KIF1BO60333 1816 aa19.11■□□□□ 0.65
SRSF3-201ENST00000339436 SLC52A1Q9NWF4 448 aa19.1■□□□□ 0.65
SRSF3-201ENST00000339436 SLIT1O75093 1534 aa19.1■□□□□ 0.65
SRSF3-201ENST00000339436 NEURL4Q96JN8 1562 aa19.09■□□□□ 0.65
SRSF3-201ENST00000339436 IDI1Q13907 227 aa19.09■□□□□ 0.65
SRSF3-201ENST00000339436 MPHOSPH9Q99550 1183 aa19.09■□□□□ 0.65
SRSF3-201ENST00000339436 ARHGAP23Q9P227 1491 aa19.08■□□□□ 0.64
SRSF3-201ENST00000339436 THEMISQ8N1K5 641 aaPredicted RBP19.06■□□□□ 0.64
SRSF3-201ENST00000339436 IQGAP1P46940 1657 aa19.04■□□□□ 0.64
SRSF3-201ENST00000339436 FOXD1Q16676 465 aa19.03■□□□□ 0.64
SRSF3-201ENST00000339436 TMEM2Q9UHN6 1383 aa19.02■□□□□ 0.64
SRSF3-201ENST00000339436 SCAF11Q99590 1463 aaKnown RBP19.02■□□□□ 0.64
SRSF3-201ENST00000339436 STAG3Q9UJ98 1225 aa19.02■□□□□ 0.64
SRSF3-201ENST00000339436 MED14O60244 1454 aa19.01■□□□□ 0.63
SRSF3-201ENST00000339436 ZFYVE9O95405 1425 aa19■□□□□ 0.63
SRSF3-201ENST00000339436 NCKAP5LQ9HCH0 1330 aa18.99■□□□□ 0.63
SRSF3-201ENST00000339436 CCDC144AA2RUR9 1427 aa18.99■□□□□ 0.63
SRSF3-201ENST00000339436 ANKLE2Q86XL3 938 aa18.98■□□□□ 0.63
SRSF3-201ENST00000339436 PPLO60437 1756 aa18.97■□□□□ 0.63
SRSF3-201ENST00000339436 NPHP4O75161 1426 aaPredicted RBP18.96■□□□□ 0.63
SRSF3-201ENST00000339436 DMRT2Q9Y5R5 561 aa18.96■□□□□ 0.63
SRSF3-201ENST00000339436 IFT172Q9UG01 1749 aa18.96■□□□□ 0.63
SRSF3-201ENST00000339436 NEXMIFQ5QGS0 1516 aa18.96■□□□□ 0.63
SRSF3-201ENST00000339436 RIMS2Q9UQ26 1411 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms