RNA–Protein interactions for RNA: ENST00000339020.7

SMIM15-201, Transcript of small integral membrane protein 15, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM15, Length 2,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM15-201ENST00000339020 CCDC141Q6ZP82 1450 aa16.22■□□□□ 0.19
SMIM15-201ENST00000339020 ROCK2O75116 1388 aaKnown RBP16.22■□□□□ 0.19
SMIM15-201ENST00000339020 PLA2R1Q13018 1463 aa16.22■□□□□ 0.19
SMIM15-201ENST00000339020 PNISRQ8TF01 805 aaKnown RBP16.21■□□□□ 0.19
SMIM15-201ENST00000339020 PLEKHH2Q8IVE3 1493 aa16.21■□□□□ 0.19
SMIM15-201ENST00000339020 ARHGAP5Q13017 1502 aa16.21■□□□□ 0.19
SMIM15-201ENST00000339020 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.21■□□□□ 0.185e-7■■□□□ 12.4
SMIM15-201ENST00000339020 ARHGEF12Q9NZN5 1544 aa16.2■□□□□ 0.18
SMIM15-201ENST00000339020 TMC1Q8TDI8 760 aa16.2■□□□□ 0.18
SMIM15-201ENST00000339020 PREX2Q70Z35 1606 aa16.19■□□□□ 0.18
SMIM15-201ENST00000339020 ARHGEF5Q12774 1597 aa16.19■□□□□ 0.18
SMIM15-201ENST00000339020 KDM5DQ9BY66 1539 aa16.18■□□□□ 0.18
SMIM15-201ENST00000339020 PPP4R2Q9NY27 417 aa16.18■□□□□ 0.18
SMIM15-201ENST00000339020 ERICH6Q7L0X2 663 aa16.17■□□□□ 0.18
SMIM15-201ENST00000339020 CCDC144AA2RUR9 1427 aa16.17■□□□□ 0.18
SMIM15-201ENST00000339020 FANCIQ9NVI1 1328 aa16.14■□□□□ 0.17
SMIM15-201ENST00000339020 PRAG1Q86YV5 1406 aa16.14■□□□□ 0.17
SMIM15-201ENST00000339020 CC2D1BQ5T0F9 858 aaKnown RBP16.14■□□□□ 0.17
SMIM15-201ENST00000339020 A2MP01023 1474 aa16.14■□□□□ 0.17
SMIM15-201ENST00000339020 AFAP1Q8N556 730 aa16.13■□□□□ 0.17
SMIM15-201ENST00000339020 DISP3Q9P2K9 1392 aa16.13■□□□□ 0.17
SMIM15-201ENST00000339020 NUDCQ9Y266 331 aa16.12■□□□□ 0.17
SMIM15-201ENST00000339020 OSCARQ8IYS5 282 aa16.11■□□□□ 0.17
SMIM15-201ENST00000339020 TRAPPC8Q9Y2L5 1435 aa16.11■□□□□ 0.17
SMIM15-201ENST00000339020 ARID4BQ4LE39 1312 aaPredicted RBP16.11■□□□□ 0.17
SMIM15-201ENST00000339020 PER1O15534 1290 aaPredicted RBP16.1■□□□□ 0.17
SMIM15-201ENST00000339020 TESK2Q96S53 571 aa16.1■□□□□ 0.17
SMIM15-201ENST00000339020 SMG6Q86US8 1419 aaKnown RBP16.1■□□□□ 0.17
SMIM15-201ENST00000339020 TRPM1Q7Z4N2 1603 aa16.09■□□□□ 0.17
SMIM15-201ENST00000339020 RSPH4AQ5TD94 716 aa16.09■□□□□ 0.17
SMIM15-201ENST00000339020 ABCC2Q92887 1545 aa16.08■□□□□ 0.16
SMIM15-201ENST00000339020 MYBBP1AQ9BQG0 1328 aaKnown RBP16.08■□□□□ 0.16
SMIM15-201ENST00000339020 CDCA7LQ96GN5 454 aa16.07■□□□□ 0.16
SMIM15-201ENST00000339020 PANK3Q9H999 370 aa16.07■□□□□ 0.16
SMIM15-201ENST00000339020 MYO5CQ9NQX4 1742 aa16.05■□□□□ 0.16
SMIM15-201ENST00000339020 LRPPRCP42704 1394 aaKnown RBP16.05■□□□□ 0.16
SMIM15-201ENST00000339020 UNC13BO14795 1591 aa16.04■□□□□ 0.16
SMIM15-201ENST00000339020 E9PCH4 1651 aa16.04■□□□□ 0.16
SMIM15-201ENST00000339020 EFCAB2Q5VUJ9 269 aa16.03■□□□□ 0.16
SMIM15-201ENST00000339020 ERICH6BQ5W0A0 696 aa16.03■□□□□ 0.16
SMIM15-201ENST00000339020 UHRF1BP1LA0JNW5 1464 aa16.03■□□□□ 0.16
SMIM15-201ENST00000339020 PLCH2O75038 1416 aa16.03■□□□□ 0.16
SMIM15-201ENST00000339020 RALBP1Q15311 655 aa16.03■□□□□ 0.16
SMIM15-201ENST00000339020 ZCCHC11Q5TAX3 1644 aaKnown RBP16.03■□□□□ 0.16
SMIM15-201ENST00000339020 RNF123Q5XPI4 1314 aa16.02■□□□□ 0.15
SMIM15-201ENST00000339020 BRD4O60885 1362 aaPredicted RBP16.01■□□□□ 0.15
SMIM15-201ENST00000339020 MAST1Q9Y2H9 1570 aa16.01■□□□□ 0.15
SMIM15-201ENST00000339020 PARD3Q8TEW0 1356 aa16.01■□□□□ 0.15
SMIM15-201ENST00000339020 IQGAP3Q86VI3 1631 aa16.01■□□□□ 0.15
SMIM15-201ENST00000339020 CCDC136Q96JN2 1154 aa16.01■□□□□ 0.15
SMIM15-201ENST00000339020 KTN1Q86UP2 1357 aaKnown RBP16■□□□□ 0.15
SMIM15-201ENST00000339020 GPRASP1Q5JY77 1395 aa16■□□□□ 0.15
SMIM15-201ENST00000339020 NLRP13Q86W25 1043 aa15.99■□□□□ 0.15
SMIM15-201ENST00000339020 MYT1LQ9UL68 1186 aa15.99■□□□□ 0.15
SMIM15-201ENST00000339020 SPAG9O60271 1321 aaKnown RBP15.99■□□□□ 0.15
SMIM15-201ENST00000339020 ERBINQ96RT1 1412 aa15.99■□□□□ 0.15
SMIM15-201ENST00000339020 DUOX2Q9NRD8 1548 aa15.98■□□□□ 0.15
SMIM15-201ENST00000339020 PLIN1O60240 522 aa15.98■□□□□ 0.15
SMIM15-201ENST00000339020 PLXNC1O60486 1568 aa15.98■□□□□ 0.15
SMIM15-201ENST00000339020 EXOC6Q8TAG9 804 aa15.98■□□□□ 0.15
SMIM15-201ENST00000339020 COL17A1Q9UMD9 1497 aaPredicted RBP15.98■□□□□ 0.15
SMIM15-201ENST00000339020 PRDM15P57071 1507 aaPredicted RBP15.97■□□□□ 0.15
SMIM15-201ENST00000339020 SKAP1Q86WV1 359 aa15.97■□□□□ 0.15
SMIM15-201ENST00000339020 DEKP35659 375 aaKnown RBP15.96■□□□□ 0.15
SMIM15-201ENST00000339020 ABCC1P33527 1531 aa15.96■□□□□ 0.15
SMIM15-201ENST00000339020 MAGI2Q86UL8 1455 aa15.94■□□□□ 0.14
SMIM15-201ENST00000339020 KIF3BO15066 747 aa15.94■□□□□ 0.14
SMIM15-201ENST00000339020 TMF1P82094 1093 aa15.94■□□□□ 0.14
SMIM15-201ENST00000339020 RRP1P56182 461 aaKnown RBP15.93■□□□□ 0.14
SMIM15-201ENST00000339020 RCAN3Q9UKA8 241 aa15.93■□□□□ 0.14
SMIM15-201ENST00000339020 ADAMTS8Q9UP79 889 aa15.93■□□□□ 0.14
SMIM15-201ENST00000339020 ATP10AO60312 1499 aa15.92■□□□□ 0.14
SMIM15-201ENST00000339020 UGGT1Q9NYU2 1555 aa15.92■□□□□ 0.14
SMIM15-201ENST00000339020 NBR1Q14596 966 aa15.92■□□□□ 0.14
SMIM15-201ENST00000339020 SCAPERQ9BY12 1400 aa15.91■□□□□ 0.14
SMIM15-201ENST00000339020 CFAP70Q5T0N1 1121 aa15.9■□□□□ 0.14
SMIM15-201ENST00000339020 SENP3Q9H4L4 574 aaPredicted RBP15.89■□□□□ 0.13
SMIM15-201ENST00000339020 PAK3O75914 559 aaPredicted RBP15.89■□□□□ 0.13
SMIM15-201ENST00000339020 ZFYVE16Q7Z3T8 1539 aa15.89■□□□□ 0.13
SMIM15-201ENST00000339020 WDR7Q9Y4E6 1490 aa15.89■□□□□ 0.13
SMIM15-201ENST00000339020 CLTCL1P53675 1640 aa15.88■□□□□ 0.13
SMIM15-201ENST00000339020 ADGRF5Q8IZF2 1346 aa15.87■□□□□ 0.13
SMIM15-201ENST00000339020 RIMBP3CA6NJZ7 1639 aa15.87■□□□□ 0.13
SMIM15-201ENST00000339020 RIMBP3BA6NNM3 1639 aa15.87■□□□□ 0.13
SMIM15-201ENST00000339020 RIMBP3Q9UFD9 1639 aa15.87■□□□□ 0.13
SMIM15-201ENST00000339020 C20orf194Q5TEA3 1177 aa15.87■□□□□ 0.13
SMIM15-201ENST00000339020 NOP58Q9Y2X3 529 aaKnown RBP15.87■□□□□ 0.13
SMIM15-201ENST00000339020 MADDQ8WXG6 1647 aa15.87■□□□□ 0.13
SMIM15-201ENST00000339020 PPP2R1AP30153 589 aa15.86■□□□□ 0.13
SMIM15-201ENST00000339020 AMER1Q5JTC6 1135 aaPredicted RBP15.86■□□□□ 0.13
SMIM15-201ENST00000339020 FANCAO15360 1455 aa15.86■□□□□ 0.13
SMIM15-201ENST00000339020 CCDC146Q8IYE0 955 aa15.85■□□□□ 0.13
SMIM15-201ENST00000339020 KNSTRNQ9Y448 316 aa15.85■□□□□ 0.13
SMIM15-201ENST00000339020 RNF17Q9BXT8 1623 aaKnown RBP15.84■□□□□ 0.13
SMIM15-201ENST00000339020 LAMC1P11047 1609 aa15.84■□□□□ 0.13
SMIM15-201ENST00000339020 EIF2AK4Q9P2K8 1649 aaKnown RBP15.83■□□□□ 0.13
SMIM15-201ENST00000339020 PLEKHH1Q9ULM0 1364 aa15.83■□□□□ 0.12
SMIM15-201ENST00000339020 CHGAP10645 457 aaKnown RBP15.82■□□□□ 0.12
SMIM15-201ENST00000339020 TRPM2O94759 1503 aa15.82■□□□□ 0.12
SMIM15-201ENST00000339020 PTPRTO14522 1441 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms