RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 TRIM26Q12899 539 aaPredicted RBP23.11■■□□□ 1.29
SEC13-201ENST00000337354 PLPPR3Q6T4P5 718 aa23.1■■□□□ 1.29
SEC13-201ENST00000337354 HFM1A2PYH4 1435 aa23.08■■□□□ 1.29
SEC13-201ENST00000337354 ESF1Q9H501 851 aaKnown RBP23.08■■□□□ 1.29
SEC13-201ENST00000337354 NAIPQ13075 1403 aa23.06■■□□□ 1.28
SEC13-201ENST00000337354 C3P01024 1663 aa23.05■■□□□ 1.28
SEC13-201ENST00000337354 CLTCQ00610 1675 aaKnown RBP23.05■■□□□ 1.28
SEC13-201ENST00000337354 MROH2AA6NES4 1674 aa23.03■■□□□ 1.28
SEC13-201ENST00000337354 ACIN1Q9UKV3 1341 aaKnown RBP23.02■■□□□ 1.28
SEC13-201ENST00000337354 EIF2AK4Q9P2K8 1649 aaKnown RBP23.02■■□□□ 1.28
SEC13-201ENST00000337354 WASHC2CQ9Y4E1 1318 aa23.01■■□□□ 1.27
SEC13-201ENST00000337354 CNTLNQ9NXG0 1405 aa23■■□□□ 1.27
SEC13-201ENST00000337354 KANK1Q14678 1352 aa22.99■■□□□ 1.27
SEC13-201ENST00000337354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.99■■□□□ 1.27
SEC13-201ENST00000337354 PREX1Q8TCU6 1659 aa22.97■■□□□ 1.27
SEC13-201ENST00000337354 SETD5Q9C0A6 1442 aa22.97■■□□□ 1.27
SEC13-201ENST00000337354 HRCP23327 699 aa22.96■■□□□ 1.27
SEC13-201ENST00000337354 FAM135AQ9P2D6 1515 aa22.96■■□□□ 1.27
SEC13-201ENST00000337354 RNF17Q9BXT8 1623 aaKnown RBP22.95■■□□□ 1.26
SEC13-201ENST00000337354 CEBPAP49715 358 aaPredicted RBP22.93■■□□□ 1.26
SEC13-201ENST00000337354 KDM5DQ9BY66 1539 aa22.92■■□□□ 1.26
SEC13-201ENST00000337354 ZMYM3Q14202 1370 aa22.92■■□□□ 1.26
SEC13-201ENST00000337354 LMTK3Q96Q04 1460 aa22.92■■□□□ 1.26
SEC13-201ENST00000337354 NUP155O75694 1391 aa22.91■■□□□ 1.26
SEC13-201ENST00000337354 PRDM15P57071 1507 aaPredicted RBP22.9■■□□□ 1.26
SEC13-201ENST00000337354 ZC3H13Q5T200 1668 aaKnown RBP22.9■■□□□ 1.26
SEC13-201ENST00000337354 TRIM52Q96A61 297 aa22.89■■□□□ 1.25
SEC13-201ENST00000337354 CEP152O94986 1710 aa22.88■■□□□ 1.25
SEC13-201ENST00000337354 GCC2Q8IWJ2 1684 aa22.88■■□□□ 1.25
SEC13-201ENST00000337354 DEPDC5O75140 1603 aa22.88■■□□□ 1.25
SEC13-201ENST00000337354 MROH1Q8NDA8 1641 aa22.88■■□□□ 1.25
SEC13-201ENST00000337354 RAB3GAP2Q9H2M9 1393 aa22.87■■□□□ 1.25
SEC13-201ENST00000337354 SETD1BQ9UPS6 1966 aaKnown RBP22.86■■□□□ 1.25
SEC13-201ENST00000337354 ABCC3O15438 1527 aa22.85■■□□□ 1.25
SEC13-201ENST00000337354 VWDEQ8N2E2 1590 aa22.85■■□□□ 1.25
SEC13-201ENST00000337354 LMTK2Q8IWU2 1503 aa22.85■■□□□ 1.25
SEC13-201ENST00000337354 UHRF1BP1Q6BDS2 1440 aa22.84■■□□□ 1.25
SEC13-201ENST00000337354 UNC13BO14795 1591 aa22.83■■□□□ 1.25
SEC13-201ENST00000337354 ARHGAP31Q2M1Z3 1444 aa22.83■■□□□ 1.25
SEC13-201ENST00000337354 MYO3AQ8NEV4 1616 aa22.82■■□□□ 1.24
SEC13-201ENST00000337354 NPATQ14207 1427 aa22.81■■□□□ 1.24
SEC13-201ENST00000337354 CAMSAP1Q5T5Y3 1602 aa22.8■■□□□ 1.24
SEC13-201ENST00000337354 SLC4A1APQ9BWU0 796 aaKnown RBP22.79■■□□□ 1.24
SEC13-201ENST00000337354 PZPP20742 1482 aa22.79■■□□□ 1.24
SEC13-201ENST00000337354 PCGF6Q9BYE7 350 aa22.78■■□□□ 1.24
SEC13-201ENST00000337354 ZNF142P52746 1687 aaPredicted RBP22.78■■□□□ 1.24
SEC13-201ENST00000337354 HSPA2P54652 639 aa22.76■■□□□ 1.23
SEC13-201ENST00000337354 FBXO31Q5XUX0 539 aaPredicted RBP22.76■■□□□ 1.23
SEC13-201ENST00000337354 MPHOSPH9Q99550 1183 aa22.76■■□□□ 1.23
SEC13-201ENST00000337354 RPRD2Q5VT52 1461 aaKnown RBP22.75■■□□□ 1.23
SEC13-201ENST00000337354 IQGAP3Q86VI3 1631 aa22.74■■□□□ 1.23
SEC13-201ENST00000337354 PKD2Q13563 968 aa22.73■■□□□ 1.23
SEC13-201ENST00000337354 CEP170BQ9Y4F5 1589 aaPredicted RBP22.72■■□□□ 1.23
SEC13-201ENST00000337354 CFAP65Q6ZU64 1925 aaKnown RBP22.72■■□□□ 1.23
SEC13-201ENST00000337354 EFCAB6Q5THR3 1501 aa22.72■■□□□ 1.23
SEC13-201ENST00000337354 TET3O43151 1660 aa22.69■■□□□ 1.22
SEC13-201ENST00000337354 TNRQ92752 1358 aa22.69■■□□□ 1.22
SEC13-201ENST00000337354 ERVK-7P63135 1459 aa22.68■■□□□ 1.22
SEC13-201ENST00000337354 SLC52A1Q9NWF4 448 aa22.67■■□□□ 1.22
SEC13-201ENST00000337354 NOS1P29475 1434 aa22.67■■□□□ 1.22
SEC13-201ENST00000337354 SPATA31D1Q6ZQQ2 1576 aa22.65■■□□□ 1.22
SEC13-201ENST00000337354 STRCQ7RTU9 1775 aa22.65■■□□□ 1.22
SEC13-201ENST00000337354 A2ML1A8K2U0 1454 aa22.63■■□□□ 1.21
SEC13-201ENST00000337354 PTPRTO14522 1441 aa22.63■■□□□ 1.21
SEC13-201ENST00000337354 NLRP1Q9C000 1473 aa22.61■■□□□ 1.21
SEC13-201ENST00000337354 IDI1Q13907 227 aa22.61■■□□□ 1.21
SEC13-201ENST00000337354 FOXD1Q16676 465 aa22.59■■□□□ 1.21
SEC13-201ENST00000337354 POLR1AO95602 1720 aaPredicted RBP22.58■■□□□ 1.2
SEC13-201ENST00000337354 E9PCH4 1651 aa22.57■■□□□ 1.2
SEC13-201ENST00000337354 THEMISQ8N1K5 641 aaPredicted RBP22.56■■□□□ 1.2
SEC13-201ENST00000337354 UGGT1Q9NYU2 1555 aa22.55■■□□□ 1.2
SEC13-201ENST00000337354 STAG3Q9UJ98 1225 aa22.54■■□□□ 1.2
SEC13-201ENST00000337354 PLA2R1Q13018 1463 aa22.54■■□□□ 1.2
SEC13-201ENST00000337354 UBR1Q8IWV7 1749 aa22.52■■□□□ 1.2
SEC13-201ENST00000337354 SYNMO15061 1565 aa22.51■■□□□ 1.19
SEC13-201ENST00000337354 ANKRD30BQ9BXX2 1392 aa22.51■■□□□ 1.19
SEC13-201ENST00000337354 PIK3C2BO00750 1634 aa22.5■■□□□ 1.19
SEC13-201ENST00000337354 TRPM2O94759 1503 aa22.5■■□□□ 1.19
SEC13-201ENST00000337354 DHX57Q6P158 1386 aaKnown RBP22.49■■□□□ 1.19
SEC13-201ENST00000337354 CCDC144AA2RUR9 1427 aa22.48■■□□□ 1.19
SEC13-201ENST00000337354 CHGAP10645 457 aaKnown RBP22.47■■□□□ 1.19
SEC13-201ENST00000337354 DMRT2Q9Y5R5 561 aa22.46■■□□□ 1.19
SEC13-201ENST00000337354 HDGFP51858 240 aaKnown RBP22.45■■□□□ 1.18
SEC13-201ENST00000337354 NCKAP5LQ9HCH0 1330 aa22.44■■□□□ 1.18
SEC13-201ENST00000337354 SPHKAPQ2M3C7 1700 aa22.43■■□□□ 1.18
SEC13-201ENST00000337354 NEURL4Q96JN8 1562 aa22.43■■□□□ 1.18
SEC13-201ENST00000337354 KDM5AP29375 1690 aaKnown RBP22.42■■□□□ 1.18
SEC13-201ENST00000337354 ANKLE2Q86XL3 938 aa22.42■■□□□ 1.18
SEC13-201ENST00000337354 ADGRB3O60242 1522 aa22.42■■□□□ 1.18
SEC13-201ENST00000337354 MYO5BQ9ULV0 1848 aa22.41■■□□□ 1.18
SEC13-201ENST00000337354 TMEM2Q9UHN6 1383 aa22.41■■□□□ 1.18
SEC13-201ENST00000337354 EID1Q9Y6B2 187 aa22.4■■□□□ 1.18
SEC13-201ENST00000337354 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.39■■□□□ 1.18
SEC13-201ENST00000337354 ZNF326Q5BKZ1 582 aaKnown RBP22.38■■□□□ 1.17
SEC13-201ENST00000337354 IQGAP1P46940 1657 aa22.38■■□□□ 1.17
SEC13-201ENST00000337354 RPGRIP1LQ68CZ1 1315 aa22.38■■□□□ 1.17
SEC13-201ENST00000337354 TXNDC2Q86VQ3 553 aa22.38■■□□□ 1.17
SEC13-201ENST00000337354 CLTCL1P53675 1640 aa22.37■■□□□ 1.17
SEC13-201ENST00000337354 ARHGAP23Q9P227 1491 aa22.36■■□□□ 1.17
SEC13-201ENST00000337354 CLSPNQ9HAW4 1339 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms