RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 PPP4R2Q9NY27 417 aa20.14■□□□□ 0.81
UBA1-201ENST00000335972 UHRF1BP1Q6BDS2 1440 aa20.14■□□□□ 0.81
UBA1-201ENST00000335972 PNISRQ8TF01 805 aaKnown RBP20.14■□□□□ 0.81
UBA1-201ENST00000335972 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.14■□□□□ 0.812e-6■□□□□ 8.3
UBA1-201ENST00000335972 CC2D1BQ5T0F9 858 aaKnown RBP20.13■□□□□ 0.81
UBA1-201ENST00000335972 AFAP1Q8N556 730 aa20.13■□□□□ 0.81
UBA1-201ENST00000335972 PLA2R1Q13018 1463 aa20.11■□□□□ 0.81
UBA1-201ENST00000335972 PREX2Q70Z35 1606 aa20.11■□□□□ 0.81
UBA1-201ENST00000335972 ARHGEF5Q12774 1597 aa20.11■□□□□ 0.81
UBA1-201ENST00000335972 ARHGEF12Q9NZN5 1544 aa20.1■□□□□ 0.81
UBA1-201ENST00000335972 RSPH4AQ5TD94 716 aa20.1■□□□□ 0.81
UBA1-201ENST00000335972 POLR1AO95602 1720 aaPredicted RBP20.1■□□□□ 0.81
UBA1-201ENST00000335972 ANP32EQ9BTT0 268 aa20.08■□□□□ 0.8
UBA1-201ENST00000335972 KDM5DQ9BY66 1539 aa20.07■□□□□ 0.8
UBA1-201ENST00000335972 EFCAB2Q5VUJ9 269 aa20.06■□□□□ 0.8
UBA1-201ENST00000335972 NUDCQ9Y266 331 aa20.06■□□□□ 0.8
UBA1-201ENST00000335972 PRAG1Q86YV5 1406 aa20.06■□□□□ 0.8
UBA1-201ENST00000335972 TRAPPC8Q9Y2L5 1435 aa20.05■□□□□ 0.8
UBA1-201ENST00000335972 MSH5O43196 834 aa20.04■□□□□ 0.8
UBA1-201ENST00000335972 A2MP01023 1474 aa20.04■□□□□ 0.8
UBA1-201ENST00000335972 ARID4BQ4LE39 1312 aaPredicted RBP20.04■□□□□ 0.8
UBA1-201ENST00000335972 DISP3Q9P2K9 1392 aa20.04■□□□□ 0.8
UBA1-201ENST00000335972 MYBBP1AQ9BQG0 1328 aaKnown RBP20.03■□□□□ 0.8
UBA1-201ENST00000335972 ABCC2Q92887 1545 aa20.03■□□□□ 0.8
UBA1-201ENST00000335972 PANK3Q9H999 370 aa20.03■□□□□ 0.8
UBA1-201ENST00000335972 SPAG9O60271 1321 aaKnown RBP20■□□□□ 0.79
UBA1-201ENST00000335972 TESK2Q96S53 571 aa19.99■□□□□ 0.79
UBA1-201ENST00000335972 SMG6Q86US8 1419 aaKnown RBP19.99■□□□□ 0.79
UBA1-201ENST00000335972 RALBP1Q15311 655 aa19.98■□□□□ 0.79
UBA1-201ENST00000335972 CCDC136Q96JN2 1154 aa19.97■□□□□ 0.79
UBA1-201ENST00000335972 KTN1Q86UP2 1357 aaKnown RBP19.97■□□□□ 0.79
UBA1-201ENST00000335972 CDCA7LQ96GN5 454 aa19.96■□□□□ 0.79
UBA1-201ENST00000335972 PLCH2O75038 1416 aa19.96■□□□□ 0.79
UBA1-201ENST00000335972 MYO5CQ9NQX4 1742 aa19.96■□□□□ 0.79
UBA1-201ENST00000335972 PER1O15534 1290 aaPredicted RBP19.96■□□□□ 0.79
UBA1-201ENST00000335972 SHROOM2Q13796 1616 aa19.95■□□□□ 0.78
UBA1-201ENST00000335972 KIF3BO15066 747 aa19.94■□□□□ 0.78
UBA1-201ENST00000335972 ERICH6BQ5W0A0 696 aa19.94■□□□□ 0.78
UBA1-201ENST00000335972 NLRP13Q86W25 1043 aa19.94■□□□□ 0.78
UBA1-201ENST00000335972 TRPM1Q7Z4N2 1603 aa19.93■□□□□ 0.78
UBA1-201ENST00000335972 ZCCHC11Q5TAX3 1644 aaKnown RBP19.93■□□□□ 0.78
UBA1-201ENST00000335972 BRD4O60885 1362 aaPredicted RBP19.93■□□□□ 0.78
UBA1-201ENST00000335972 TMF1P82094 1093 aa19.92■□□□□ 0.78
UBA1-201ENST00000335972 SENP3Q9H4L4 574 aaPredicted RBP19.91■□□□□ 0.78
UBA1-201ENST00000335972 UNC13BO14795 1591 aa19.91■□□□□ 0.78
UBA1-201ENST00000335972 ERBINQ96RT1 1412 aa19.91■□□□□ 0.78
UBA1-201ENST00000335972 DUOX2Q9NRD8 1548 aa19.9■□□□□ 0.78
UBA1-201ENST00000335972 LRPPRCP42704 1394 aaKnown RBP19.89■□□□□ 0.77
UBA1-201ENST00000335972 PLIN1O60240 522 aa19.88■□□□□ 0.77
UBA1-201ENST00000335972 MAST1Q9Y2H9 1570 aa19.87■□□□□ 0.77
UBA1-201ENST00000335972 EXOC6Q8TAG9 804 aa19.87■□□□□ 0.77
UBA1-201ENST00000335972 PARD3Q8TEW0 1356 aa19.87■□□□□ 0.77
UBA1-201ENST00000335972 CHGAP10645 457 aaKnown RBP19.86■□□□□ 0.77
UBA1-201ENST00000335972 IQGAP3Q86VI3 1631 aa19.86■□□□□ 0.77
UBA1-201ENST00000335972 SCAPERQ9BY12 1400 aa19.86■□□□□ 0.77
UBA1-201ENST00000335972 GPRASP1Q5JY77 1395 aa19.86■□□□□ 0.77
UBA1-201ENST00000335972 COL17A1Q9UMD9 1497 aaPredicted RBP19.85■□□□□ 0.77
UBA1-201ENST00000335972 PLXNC1O60486 1568 aa19.85■□□□□ 0.77
UBA1-201ENST00000335972 ABCC1P33527 1531 aa19.84■□□□□ 0.77
UBA1-201ENST00000335972 ERICH6Q7L0X2 663 aa19.84■□□□□ 0.77
UBA1-201ENST00000335972 RCAN3Q9UKA8 241 aa19.84■□□□□ 0.77
UBA1-201ENST00000335972 CFAP70Q5T0N1 1121 aa19.82■□□□□ 0.76
UBA1-201ENST00000335972 RRP1P56182 461 aaKnown RBP19.82■□□□□ 0.76
UBA1-201ENST00000335972 RNF123Q5XPI4 1314 aa19.82■□□□□ 0.76
UBA1-201ENST00000335972 E9PCH4 1651 aa19.81■□□□□ 0.76
UBA1-201ENST00000335972 ADAMTS8Q9UP79 889 aa19.81■□□□□ 0.76
UBA1-201ENST00000335972 KNSTRNQ9Y448 316 aa19.81■□□□□ 0.76
UBA1-201ENST00000335972 PRDM15P57071 1507 aaPredicted RBP19.8■□□□□ 0.76
UBA1-201ENST00000335972 SKAP1Q86WV1 359 aa19.8■□□□□ 0.76
UBA1-201ENST00000335972 CLASP1Q7Z460 1538 aa19.79■□□□□ 0.76
UBA1-201ENST00000335972 FANCIQ9NVI1 1328 aa19.79■□□□□ 0.76
UBA1-201ENST00000335972 ATP10AO60312 1499 aa19.78■□□□□ 0.76
UBA1-201ENST00000335972 UGGT1Q9NYU2 1555 aa19.78■□□□□ 0.76
UBA1-201ENST00000335972 FANCAO15360 1455 aa19.78■□□□□ 0.76
UBA1-201ENST00000335972 MAGI2Q86UL8 1455 aa19.76■□□□□ 0.75
UBA1-201ENST00000335972 ADGRF5Q8IZF2 1346 aa19.76■□□□□ 0.75
UBA1-201ENST00000335972 NUTM2DQ5VT03 806 aaPredicted RBP19.76■□□□□ 0.75
UBA1-201ENST00000335972 CCDC146Q8IYE0 955 aa19.76■□□□□ 0.75
UBA1-201ENST00000335972 GGT6Q6P531 493 aa19.75■□□□□ 0.75
UBA1-201ENST00000335972 PPP2R1AP30153 589 aa19.75■□□□□ 0.75
UBA1-201ENST00000335972 ZFYVE16Q7Z3T8 1539 aa19.74■□□□□ 0.75
UBA1-201ENST00000335972 UHRF1BP1LA0JNW5 1464 aa19.73■□□□□ 0.75
UBA1-201ENST00000335972 WDR7Q9Y4E6 1490 aa19.73■□□□□ 0.75
UBA1-201ENST00000335972 KANK1Q14678 1352 aa19.73■□□□□ 0.75
UBA1-201ENST00000335972 ADGRL1O94910 1474 aa19.72■□□□□ 0.75
UBA1-201ENST00000335972 WDR43Q15061 677 aaKnown RBP eCLIP19.72■□□□□ 0.75
UBA1-201ENST00000335972 AMER1Q5JTC6 1135 aaPredicted RBP19.71■□□□□ 0.75
UBA1-201ENST00000335972 NPM2Q86SE8 214 aaKnown RBP19.71■□□□□ 0.75
UBA1-201ENST00000335972 CLTCL1P53675 1640 aa19.71■□□□□ 0.75
UBA1-201ENST00000335972 TNNT2P45379 298 aaPredicted RBP19.7■□□□□ 0.74
UBA1-201ENST00000335972 EIF2AK4Q9P2K8 1649 aaKnown RBP19.7■□□□□ 0.74
UBA1-201ENST00000335972 C20orf194Q5TEA3 1177 aa19.7■□□□□ 0.74
UBA1-201ENST00000335972 CFAP65Q6ZU64 1925 aaKnown RBP19.69■□□□□ 0.74
UBA1-201ENST00000335972 PAK3O75914 559 aaPredicted RBP19.69■□□□□ 0.74
UBA1-201ENST00000335972 ASXL2Q76L83 1435 aa19.69■□□□□ 0.74
UBA1-201ENST00000335972 ATP7AQ04656 1500 aa19.68■□□□□ 0.74
UBA1-201ENST00000335972 CRBNQ96SW2 442 aa19.68■□□□□ 0.74
UBA1-201ENST00000335972 MADDQ8WXG6 1647 aa19.68■□□□□ 0.74
UBA1-201ENST00000335972 TRAK1Q9UPV9 953 aa19.68■□□□□ 0.74
UBA1-201ENST00000335972 TMEM132EQ6IEE7 984 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms