RNA–Protein interactions for RNA: ENST00000335798.8

UBE2E2-201, Transcript of ubiquitin conjugating enzyme E2 E2, humanhuman

TSL 1 (best)

Gene UBE2E2, Length 1,330 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2-201ENST00000335798 UNC13BO14795 1591 aa29.34■■■□□ 2.29
UBE2E2-201ENST00000335798 KIF3BO15066 747 aa29.34■■■□□ 2.29
UBE2E2-201ENST00000335798 TRIM26Q12899 539 aaPredicted RBP29.3■■■□□ 2.28
UBE2E2-201ENST00000335798 FAM135AQ9P2D6 1515 aa29.3■■■□□ 2.28
UBE2E2-201ENST00000335798 ZC3H13Q5T200 1668 aaKnown RBP29.29■■■□□ 2.28
UBE2E2-201ENST00000335798 RIMS1Q86UR5 1692 aaKnown RBP29.29■■■□□ 2.28
UBE2E2-201ENST00000335798 VWDEQ8N2E2 1590 aa29.29■■■□□ 2.28
UBE2E2-201ENST00000335798 CLTCQ00610 1675 aaKnown RBP29.28■■■□□ 2.28
UBE2E2-201ENST00000335798 MLECQ14165 292 aa29.28■■■□□ 2.28
UBE2E2-201ENST00000335798 CEP152O94986 1710 aa29.27■■■□□ 2.28
UBE2E2-201ENST00000335798 MROH2AA6NES4 1674 aa29.27■■■□□ 2.28
UBE2E2-201ENST00000335798 KDM5DQ9BY66 1539 aa29.27■■■□□ 2.28
UBE2E2-201ENST00000335798 KDM4FA0A1W2PPD8 638 aa29.25■■■□□ 2.27
UBE2E2-201ENST00000335798 GGT6Q6P531 493 aa29.24■■■□□ 2.27
UBE2E2-201ENST00000335798 ABCC3O15438 1527 aa29.23■■■□□ 2.27
UBE2E2-201ENST00000335798 IQGAP3Q86VI3 1631 aa29.22■■■□□ 2.27
UBE2E2-201ENST00000335798 SETD5Q9C0A6 1442 aa29.21■■■□□ 2.27
UBE2E2-201ENST00000335798 PPP6R1Q9UPN7 881 aa29.2■■■□□ 2.27
UBE2E2-201ENST00000335798 C3P01024 1663 aa29.19■■■□□ 2.26
UBE2E2-201ENST00000335798 CAMSAP1Q5T5Y3 1602 aa29.19■■■□□ 2.26
UBE2E2-201ENST00000335798 CNTLNQ9NXG0 1405 aa29.19■■■□□ 2.26
UBE2E2-201ENST00000335798 LMTK2Q8IWU2 1503 aa29.18■■■□□ 2.26
UBE2E2-201ENST00000335798 TET3O43151 1660 aa29.14■■■□□ 2.25
UBE2E2-201ENST00000335798 PTPRMP28827 1452 aa29.14■■■□□ 2.25
UBE2E2-201ENST00000335798 RAB3GAP2Q9H2M9 1393 aa29.13■■■□□ 2.25
UBE2E2-201ENST00000335798 KANK1Q14678 1352 aa29.11■■■□□ 2.25
UBE2E2-201ENST00000335798 WASHC2CQ9Y4E1 1318 aa29.1■■■□□ 2.25
UBE2E2-201ENST00000335798 EFCAB6Q5THR3 1501 aa29.1■■■□□ 2.25
UBE2E2-201ENST00000335798 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.1■■■□□ 2.25
UBE2E2-201ENST00000335798 NUP155O75694 1391 aa29.07■■■□□ 2.24
UBE2E2-201ENST00000335798 E9PCH4 1651 aa29.06■■■□□ 2.24
UBE2E2-201ENST00000335798 ZMYM3Q14202 1370 aa29.06■■■□□ 2.24
UBE2E2-201ENST00000335798 PZPP20742 1482 aa29.05■■■□□ 2.24
UBE2E2-201ENST00000335798 ESF1Q9H501 851 aaKnown RBP29.05■■■□□ 2.24
UBE2E2-201ENST00000335798 ARHGAP31Q2M1Z3 1444 aa29.04■■■□□ 2.24
UBE2E2-201ENST00000335798 CFAP65Q6ZU64 1925 aaKnown RBP29.03■■■□□ 2.24
UBE2E2-201ENST00000335798 HRCP23327 699 aa29.02■■■□□ 2.24
UBE2E2-201ENST00000335798 PREX1Q8TCU6 1659 aa29.02■■■□□ 2.24
UBE2E2-201ENST00000335798 NPATQ14207 1427 aa29.01■■■□□ 2.24
UBE2E2-201ENST00000335798 ACIN1Q9UKV3 1341 aaKnown RBP28.99■■■□□ 2.23
UBE2E2-201ENST00000335798 RPRD2Q5VT52 1461 aaKnown RBP28.98■■■□□ 2.23
UBE2E2-201ENST00000335798 SPATA31D1Q6ZQQ2 1576 aa28.98■■■□□ 2.23
UBE2E2-201ENST00000335798 CEBPAP49715 358 aaPredicted RBP28.96■■■□□ 2.23
UBE2E2-201ENST00000335798 SETD1BQ9UPS6 1966 aaKnown RBP28.95■■■□□ 2.22
UBE2E2-201ENST00000335798 TRIM52Q96A61 297 aa28.94■■■□□ 2.22
UBE2E2-201ENST00000335798 ERVK-7P63135 1459 aa28.94■■■□□ 2.22
UBE2E2-201ENST00000335798 PCGF6Q9BYE7 350 aa28.94■■■□□ 2.22
UBE2E2-201ENST00000335798 SPHKAPQ2M3C7 1700 aa28.91■■■□□ 2.22
UBE2E2-201ENST00000335798 MYO3AQ8NEV4 1616 aa28.89■■■□□ 2.22
UBE2E2-201ENST00000335798 SYNMO15061 1565 aa28.89■■■□□ 2.22
UBE2E2-201ENST00000335798 NOS1P29475 1434 aa28.89■■■□□ 2.21
UBE2E2-201ENST00000335798 FBXO31Q5XUX0 539 aaPredicted RBP28.88■■■□□ 2.21
UBE2E2-201ENST00000335798 MPHOSPH9Q99550 1183 aa28.86■■■□□ 2.21
UBE2E2-201ENST00000335798 SLC4A1APQ9BWU0 796 aaKnown RBP28.86■■■□□ 2.21
UBE2E2-201ENST00000335798 PLPPR3Q6T4P5 718 aa28.85■■■□□ 2.21
UBE2E2-201ENST00000335798 ZNF142P52746 1687 aaPredicted RBP28.84■■■□□ 2.21
UBE2E2-201ENST00000335798 PIK3C2BO00750 1634 aa28.83■■■□□ 2.21
UBE2E2-201ENST00000335798 PTPRTO14522 1441 aa28.82■■■□□ 2.2
UBE2E2-201ENST00000335798 TNRQ92752 1358 aa28.81■■■□□ 2.2
UBE2E2-201ENST00000335798 PKD2Q13563 968 aa28.81■■■□□ 2.2
UBE2E2-201ENST00000335798 TRPM2O94759 1503 aa28.79■■■□□ 2.2
UBE2E2-201ENST00000335798 PLA2R1Q13018 1463 aa28.78■■■□□ 2.2
UBE2E2-201ENST00000335798 CEP170BQ9Y4F5 1589 aaPredicted RBP28.77■■■□□ 2.2
UBE2E2-201ENST00000335798 NLRP1Q9C000 1473 aa28.76■■■□□ 2.2
UBE2E2-201ENST00000335798 UGGT1Q9NYU2 1555 aa28.76■■■□□ 2.19
UBE2E2-201ENST00000335798 CLTCL1P53675 1640 aa28.74■■■□□ 2.19
UBE2E2-201ENST00000335798 KDM5AP29375 1690 aaKnown RBP28.74■■■□□ 2.19
UBE2E2-201ENST00000335798 LMTK3Q96Q04 1460 aa28.74■■■□□ 2.19
UBE2E2-201ENST00000335798 UBR1Q8IWV7 1749 aa28.73■■■□□ 2.19
UBE2E2-201ENST00000335798 FOXD1Q16676 465 aa28.72■■■□□ 2.19
UBE2E2-201ENST00000335798 UHRF1BP1Q6BDS2 1440 aa28.72■■■□□ 2.19
UBE2E2-201ENST00000335798 A2ML1A8K2U0 1454 aa28.71■■■□□ 2.19
UBE2E2-201ENST00000335798 MYO5BQ9ULV0 1848 aa28.71■■■□□ 2.19
UBE2E2-201ENST00000335798 DHX57Q6P158 1386 aaKnown RBP28.7■■■□□ 2.18
UBE2E2-201ENST00000335798 KIF1BO60333 1816 aa28.67■■■□□ 2.18
UBE2E2-201ENST00000335798 TMEM131LA2VDJ0 1609 aa28.67■■■□□ 2.18
UBE2E2-201ENST00000335798 ADGRB3O60242 1522 aa28.66■■■□□ 2.18
UBE2E2-201ENST00000335798 IDI1Q13907 227 aa28.65■■■□□ 2.18
UBE2E2-201ENST00000335798 AEBP2Q6ZN18 517 aaPredicted RBP28.65■■■□□ 2.18
UBE2E2-201ENST00000335798 SLC52A1Q9NWF4 448 aa28.65■■■□□ 2.18
UBE2E2-201ENST00000335798 ANKRD30BQ9BXX2 1392 aa28.64■■■□□ 2.18
UBE2E2-201ENST00000335798 CCDC144AA2RUR9 1427 aa28.57■■■□□ 2.16
UBE2E2-201ENST00000335798 NEURL4Q96JN8 1562 aa28.56■■■□□ 2.16
UBE2E2-201ENST00000335798 SLIT1O75093 1534 aa28.53■■■□□ 2.16
UBE2E2-201ENST00000335798 POLR1AO95602 1720 aaPredicted RBP28.53■■■□□ 2.16
UBE2E2-201ENST00000335798 ARHGAP23Q9P227 1491 aa28.52■■■□□ 2.16
UBE2E2-201ENST00000335798 STRCQ7RTU9 1775 aa28.52■■■□□ 2.16
UBE2E2-201ENST00000335798 SPATA31E1Q6ZUB1 1445 aa28.5■■■□□ 2.15
UBE2E2-201ENST00000335798 IFT172Q9UG01 1749 aa28.49■■■□□ 2.15
UBE2E2-201ENST00000335798 HSPA2P54652 639 aa28.47■■■□□ 2.15
UBE2E2-201ENST00000335798 THEMISQ8N1K5 641 aaPredicted RBP28.47■■■□□ 2.15
UBE2E2-201ENST00000335798 PPLO60437 1756 aa28.46■■■□□ 2.15
UBE2E2-201ENST00000335798 ZFYVE9O95405 1425 aa28.46■■■□□ 2.15
UBE2E2-201ENST00000335798 TMEM2Q9UHN6 1383 aa28.45■■■□□ 2.15
UBE2E2-201ENST00000335798 NEXMIFQ5QGS0 1516 aa28.45■■■□□ 2.14
UBE2E2-201ENST00000335798 STAG3Q9UJ98 1225 aa28.43■■■□□ 2.14
UBE2E2-201ENST00000335798 CHGAP10645 457 aaKnown RBP28.41■■■□□ 2.14
UBE2E2-201ENST00000335798 RIMS2Q9UQ26 1411 aa28.39■■■□□ 2.13
UBE2E2-201ENST00000335798 SCAF11Q99590 1463 aaKnown RBP28.37■■■□□ 2.13
UBE2E2-201ENST00000335798 MED14O60244 1454 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms