RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.08■□□□□ 0.96
APOBEC3B-202ENST00000335760 DEPDC5O75140 1603 aa21.06■□□□□ 0.96
APOBEC3B-202ENST00000335760 MROH1Q8NDA8 1641 aa21.06■□□□□ 0.96
APOBEC3B-202ENST00000335760 ADAMTSL3P82987 1691 aa21.06■□□□□ 0.96
APOBEC3B-202ENST00000335760 FER1L4A9Z1Z3 1794 aa21.04■□□□□ 0.96
APOBEC3B-202ENST00000335760 MADDQ8WXG6 1647 aa21.04■□□□□ 0.96
APOBEC3B-202ENST00000335760 ESF1Q9H501 851 aaKnown RBP21.04■□□□□ 0.96
APOBEC3B-202ENST00000335760 PPP6R1Q9UPN7 881 aa21.04■□□□□ 0.96
APOBEC3B-202ENST00000335760 UNC13BO14795 1591 aa21.03■□□□□ 0.96
APOBEC3B-202ENST00000335760 PRDM15P57071 1507 aaPredicted RBP21.03■□□□□ 0.96
APOBEC3B-202ENST00000335760 KANK1Q14678 1352 aa21.02■□□□□ 0.96
APOBEC3B-202ENST00000335760 RAB3GAP2Q9H2M9 1393 aa21.02■□□□□ 0.96
APOBEC3B-202ENST00000335760 WASHC2CQ9Y4E1 1318 aa21.02■□□□□ 0.96
APOBEC3B-202ENST00000335760 KDM4FA0A1W2PPD8 638 aa21.02■□□□□ 0.96
APOBEC3B-202ENST00000335760 PCGF6Q9BYE7 350 aa21.02■□□□□ 0.96
APOBEC3B-202ENST00000335760 CLTCQ00610 1675 aaKnown RBP21.01■□□□□ 0.95
APOBEC3B-202ENST00000335760 KDM5DQ9BY66 1539 aa21■□□□□ 0.95
APOBEC3B-202ENST00000335760 RIMS1Q86UR5 1692 aaKnown RBP21■□□□□ 0.95
APOBEC3B-202ENST00000335760 TRIM52Q96A61 297 aa20.99■□□□□ 0.95
APOBEC3B-202ENST00000335760 NUP155O75694 1391 aa20.99■□□□□ 0.95
APOBEC3B-202ENST00000335760 FAM135AQ9P2D6 1515 aa20.99■□□□□ 0.95
APOBEC3B-202ENST00000335760 CEP152O94986 1710 aa20.99■□□□□ 0.95
APOBEC3B-202ENST00000335760 CNTLNQ9NXG0 1405 aa20.98■□□□□ 0.95
APOBEC3B-202ENST00000335760 ABCC3O15438 1527 aa20.98■□□□□ 0.95
APOBEC3B-202ENST00000335760 ZC3H13Q5T200 1668 aaKnown RBP20.98■□□□□ 0.95
APOBEC3B-202ENST00000335760 VWDEQ8N2E2 1590 aa20.97■□□□□ 0.95
APOBEC3B-202ENST00000335760 IQGAP3Q86VI3 1631 aa20.95■□□□□ 0.94
APOBEC3B-202ENST00000335760 MROH2AA6NES4 1674 aa20.94■□□□□ 0.94
APOBEC3B-202ENST00000335760 HRCP23327 699 aa20.94■□□□□ 0.94
APOBEC3B-202ENST00000335760 ACIN1Q9UKV3 1341 aaKnown RBP20.93■□□□□ 0.94
APOBEC3B-202ENST00000335760 LMTK2Q8IWU2 1503 aa20.93■□□□□ 0.94
APOBEC3B-202ENST00000335760 PLPPR3Q6T4P5 718 aa20.93■□□□□ 0.94
APOBEC3B-202ENST00000335760 ZMYM3Q14202 1370 aa20.93■□□□□ 0.94
APOBEC3B-202ENST00000335760 CAMSAP1Q5T5Y3 1602 aa20.92■□□□□ 0.94
APOBEC3B-202ENST00000335760 PTPRMP28827 1452 aa20.92■□□□□ 0.94
APOBEC3B-202ENST00000335760 CEBPAP49715 358 aaPredicted RBP20.9■□□□□ 0.94
APOBEC3B-202ENST00000335760 C3P01024 1663 aa20.9■□□□□ 0.94
APOBEC3B-202ENST00000335760 TET3O43151 1660 aa20.89■□□□□ 0.94
APOBEC3B-202ENST00000335760 PZPP20742 1482 aa20.89■□□□□ 0.93
APOBEC3B-202ENST00000335760 EFCAB6Q5THR3 1501 aa20.88■□□□□ 0.93
APOBEC3B-202ENST00000335760 SLC4A1APQ9BWU0 796 aaKnown RBP20.87■□□□□ 0.93
APOBEC3B-202ENST00000335760 ARHGAP31Q2M1Z3 1444 aa20.86■□□□□ 0.93
APOBEC3B-202ENST00000335760 MPHOSPH9Q99550 1183 aa20.85■□□□□ 0.93
APOBEC3B-202ENST00000335760 NPATQ14207 1427 aa20.84■□□□□ 0.93
APOBEC3B-202ENST00000335760 E9PCH4 1651 aa20.84■□□□□ 0.93
APOBEC3B-202ENST00000335760 FBXO31Q5XUX0 539 aaPredicted RBP20.84■□□□□ 0.93
APOBEC3B-202ENST00000335760 CFAP65Q6ZU64 1925 aaKnown RBP20.83■□□□□ 0.92
APOBEC3B-202ENST00000335760 PKD2Q13563 968 aa20.82■□□□□ 0.92
APOBEC3B-202ENST00000335760 RPRD2Q5VT52 1461 aaKnown RBP20.81■□□□□ 0.92
APOBEC3B-202ENST00000335760 PREX1Q8TCU6 1659 aa20.79■□□□□ 0.92
APOBEC3B-202ENST00000335760 ERVK-7P63135 1459 aa20.79■□□□□ 0.92
APOBEC3B-202ENST00000335760 FOXD1Q16676 465 aa20.77■□□□□ 0.92
APOBEC3B-202ENST00000335760 SPATA31D1Q6ZQQ2 1576 aa20.77■□□□□ 0.92
APOBEC3B-202ENST00000335760 TNRQ92752 1358 aa20.76■□□□□ 0.91
APOBEC3B-202ENST00000335760 NOS1P29475 1434 aa20.74■□□□□ 0.91
APOBEC3B-202ENST00000335760 SPHKAPQ2M3C7 1700 aa20.73■□□□□ 0.91
APOBEC3B-202ENST00000335760 SYNMO15061 1565 aa20.72■□□□□ 0.91
APOBEC3B-202ENST00000335760 SETD1BQ9UPS6 1966 aaKnown RBP20.71■□□□□ 0.91
APOBEC3B-202ENST00000335760 PTPRTO14522 1441 aa20.71■□□□□ 0.91
APOBEC3B-202ENST00000335760 DHX57Q6P158 1386 aaKnown RBP20.7■□□□□ 0.9
APOBEC3B-202ENST00000335760 PLA2R1Q13018 1463 aa20.69■□□□□ 0.9
APOBEC3B-202ENST00000335760 MYO3AQ8NEV4 1616 aa20.68■□□□□ 0.9
APOBEC3B-202ENST00000335760 TRPM2O94759 1503 aa20.68■□□□□ 0.9
APOBEC3B-202ENST00000335760 UHRF1BP1Q6BDS2 1440 aa20.67■□□□□ 0.9
APOBEC3B-202ENST00000335760 UGGT1Q9NYU2 1555 aa20.67■□□□□ 0.9
APOBEC3B-202ENST00000335760 NLRP1Q9C000 1473 aa20.66■□□□□ 0.9
APOBEC3B-202ENST00000335760 IDI1Q13907 227 aa20.66■□□□□ 0.9
APOBEC3B-202ENST00000335760 SLC52A1Q9NWF4 448 aa20.66■□□□□ 0.9
APOBEC3B-202ENST00000335760 PIK3C2BO00750 1634 aa20.64■□□□□ 0.89
APOBEC3B-202ENST00000335760 ANKRD30BQ9BXX2 1392 aa20.64■□□□□ 0.89
APOBEC3B-202ENST00000335760 CLTCL1P53675 1640 aa20.63■□□□□ 0.89
APOBEC3B-202ENST00000335760 A2ML1A8K2U0 1454 aa20.63■□□□□ 0.89
APOBEC3B-202ENST00000335760 CEP170BQ9Y4F5 1589 aaPredicted RBP20.63■□□□□ 0.89
APOBEC3B-202ENST00000335760 ZNF142P52746 1687 aaPredicted RBP20.61■□□□□ 0.89
APOBEC3B-202ENST00000335760 CCDC144AA2RUR9 1427 aa20.61■□□□□ 0.89
APOBEC3B-202ENST00000335760 CHGAP10645 457 aaKnown RBP20.6■□□□□ 0.89
APOBEC3B-202ENST00000335760 STAG3Q9UJ98 1225 aa20.6■□□□□ 0.89
APOBEC3B-202ENST00000335760 LMTK3Q96Q04 1460 aa20.59■□□□□ 0.89
APOBEC3B-202ENST00000335760 ADGRB3O60242 1522 aa20.58■□□□□ 0.88
APOBEC3B-202ENST00000335760 UBR1Q8IWV7 1749 aa20.58■□□□□ 0.88
APOBEC3B-202ENST00000335760 KIF1BO60333 1816 aa20.56■□□□□ 0.88
APOBEC3B-202ENST00000335760 TMEM131LA2VDJ0 1609 aa20.55■□□□□ 0.88
APOBEC3B-202ENST00000335760 THEMISQ8N1K5 641 aaPredicted RBP20.55■□□□□ 0.88
APOBEC3B-202ENST00000335760 KDM5AP29375 1690 aaKnown RBP20.55■□□□□ 0.88
APOBEC3B-202ENST00000335760 MYO5BQ9ULV0 1848 aa20.54■□□□□ 0.88
APOBEC3B-202ENST00000335760 HSPA2P54652 639 aa20.54■□□□□ 0.88
APOBEC3B-202ENST00000335760 CCER1Q8TC90 406 aaPredicted RBP20.53■□□□□ 0.88
APOBEC3B-202ENST00000335760 SIN3AQ96ST3 1273 aa20.51■□□□□ 0.87
APOBEC3B-202ENST00000335760 ZNF326Q5BKZ1 582 aaKnown RBP20.5■□□□□ 0.87
APOBEC3B-202ENST00000335760 NEUROD1Q13562 356 aa20.48■□□□□ 0.87
APOBEC3B-202ENST00000335760 RGL3Q3MIN7 710 aa20.48■□□□□ 0.87
APOBEC3B-202ENST00000335760 SPATA31E1Q6ZUB1 1445 aa20.48■□□□□ 0.87
APOBEC3B-202ENST00000335760 TMEM2Q9UHN6 1383 aa20.47■□□□□ 0.87
APOBEC3B-202ENST00000335760 SLIT1O75093 1534 aa20.46■□□□□ 0.87
APOBEC3B-202ENST00000335760 ARHGAP23Q9P227 1491 aa20.46■□□□□ 0.87
APOBEC3B-202ENST00000335760 NEURL4Q96JN8 1562 aa20.46■□□□□ 0.87
APOBEC3B-202ENST00000335760 RIMS2Q9UQ26 1411 aa20.44■□□□□ 0.86
APOBEC3B-202ENST00000335760 CLSPNQ9HAW4 1339 aa20.44■□□□□ 0.86
APOBEC3B-202ENST00000335760 EID1Q9Y6B2 187 aa20.44■□□□□ 0.86
APOBEC3B-202ENST00000335760 TXNDC2Q86VQ3 553 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms