RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 ST20-MTHFSA0A0A6YYL1 179 aa31.89■■■□□ 2.7
NDEL1-201ENST00000334527 UNC13BO14795 1591 aa31.86■■■□□ 2.69
NDEL1-201ENST00000334527 CCDC144AA2RUR9 1427 aa31.85■■■□□ 2.69
NDEL1-201ENST00000334527 ABCC2Q92887 1545 aa31.85■■■□□ 2.69
NDEL1-201ENST00000334527 MYO5CQ9NQX4 1742 aa31.85■■■□□ 2.69
NDEL1-201ENST00000334527 ERCC6L2Q5T890 1561 aa31.84■■■□□ 2.69
NDEL1-201ENST00000334527 PPP4R2Q9NY27 417 aa31.84■■■□□ 2.69
NDEL1-201ENST00000334527 PLXNC1O60486 1568 aa31.8■■■□□ 2.68
NDEL1-201ENST00000334527 PLEKHH2Q8IVE3 1493 aa31.79■■■□□ 2.68
NDEL1-201ENST00000334527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.79■■■□□ 2.681e-7■□□□□ 11.1
NDEL1-201ENST00000334527 TRPM1Q7Z4N2 1603 aa31.79■■■□□ 2.68
NDEL1-201ENST00000334527 PRAG1Q86YV5 1406 aa31.79■■■□□ 2.68
NDEL1-201ENST00000334527 SMG6Q86US8 1419 aaKnown RBP31.76■■■□□ 2.68
NDEL1-201ENST00000334527 PLA2R1Q13018 1463 aa31.76■■■□□ 2.68
NDEL1-201ENST00000334527 E9PCH4 1651 aa31.75■■■□□ 2.67
NDEL1-201ENST00000334527 IQGAP3Q86VI3 1631 aa31.75■■■□□ 2.67
NDEL1-201ENST00000334527 ANP32EQ9BTT0 268 aa31.75■■■□□ 2.67
NDEL1-201ENST00000334527 RGL3Q3MIN7 710 aa31.74■■■□□ 2.67
NDEL1-201ENST00000334527 TMC1Q8TDI8 760 aa31.74■■■□□ 2.67
NDEL1-201ENST00000334527 PNISRQ8TF01 805 aaKnown RBP31.74■■■□□ 2.67
NDEL1-201ENST00000334527 DUOX2Q9NRD8 1548 aa31.71■■■□□ 2.67
NDEL1-201ENST00000334527 A2MP01023 1474 aa31.7■■■□□ 2.67
NDEL1-201ENST00000334527 KTN1Q86UP2 1357 aaKnown RBP31.68■■■□□ 2.66
NDEL1-201ENST00000334527 NUDCQ9Y266 331 aa31.68■■■□□ 2.66
NDEL1-201ENST00000334527 MYBBP1AQ9BQG0 1328 aaKnown RBP31.67■■■□□ 2.66
NDEL1-201ENST00000334527 NBPF1Q3BBV0 1214 aa31.66■■■□□ 2.66
NDEL1-201ENST00000334527 RALBP1Q15311 655 aa31.66■■■□□ 2.66
NDEL1-201ENST00000334527 ZCCHC11Q5TAX3 1644 aaKnown RBP31.65■■■□□ 2.66
NDEL1-201ENST00000334527 PLCH2O75038 1416 aa31.65■■■□□ 2.66
NDEL1-201ENST00000334527 BRD4O60885 1362 aaPredicted RBP31.65■■■□□ 2.66
NDEL1-201ENST00000334527 ERBINQ96RT1 1412 aa31.64■■■□□ 2.66
NDEL1-201ENST00000334527 B4GALNT3Q6L9W6 998 aa31.64■■■□□ 2.66
NDEL1-201ENST00000334527 GPRASP1Q5JY77 1395 aa31.64■■■□□ 2.66
NDEL1-201ENST00000334527 MAGI2Q86UL8 1455 aa31.63■■■□□ 2.65
NDEL1-201ENST00000334527 LAMC1P11047 1609 aa31.62■■■□□ 2.65
NDEL1-201ENST00000334527 LRPPRCP42704 1394 aaKnown RBP31.61■■■□□ 2.65
NDEL1-201ENST00000334527 SENP3-EIF4A1A0A087X0R7 540 aa31.6■■■□□ 2.65
NDEL1-201ENST00000334527 EFCAB2Q5VUJ9 269 aa31.6■■■□□ 2.65
NDEL1-201ENST00000334527 ATP10AO60312 1499 aa31.59■■■□□ 2.65
NDEL1-201ENST00000334527 PRDM15P57071 1507 aaPredicted RBP31.58■■■□□ 2.65
NDEL1-201ENST00000334527 EIF2AK4Q9P2K8 1649 aaKnown RBP31.58■■■□□ 2.65
NDEL1-201ENST00000334527 ABCC1P33527 1531 aa31.58■■■□□ 2.65
NDEL1-201ENST00000334527 UHRF1BP1LA0JNW5 1464 aa31.56■■■□□ 2.64
NDEL1-201ENST00000334527 CLASP1Q7Z460 1538 aa31.55■■■□□ 2.64
NDEL1-201ENST00000334527 RNF123Q5XPI4 1314 aa31.54■■■□□ 2.64
NDEL1-201ENST00000334527 COL17A1Q9UMD9 1497 aaPredicted RBP31.54■■■□□ 2.64
NDEL1-201ENST00000334527 TRAPPC8Q9Y2L5 1435 aa31.53■■■□□ 2.64
NDEL1-201ENST00000334527 PARD3Q8TEW0 1356 aa31.52■■■□□ 2.64
NDEL1-201ENST00000334527 TESK2Q96S53 571 aa31.5■■■□□ 2.63
NDEL1-201ENST00000334527 DISP3Q9P2K9 1392 aa31.5■■■□□ 2.63
NDEL1-201ENST00000334527 NLRP13Q86W25 1043 aa31.49■■■□□ 2.63
NDEL1-201ENST00000334527 FANCIQ9NVI1 1328 aa31.49■■■□□ 2.63
NDEL1-201ENST00000334527 PER1O15534 1290 aaPredicted RBP31.48■■■□□ 2.63
NDEL1-201ENST00000334527 RNF17Q9BXT8 1623 aaKnown RBP31.43■■■□□ 2.62
NDEL1-201ENST00000334527 SPAG9O60271 1321 aaKnown RBP31.43■■■□□ 2.62
NDEL1-201ENST00000334527 MSH5O43196 834 aa31.42■■■□□ 2.62
NDEL1-201ENST00000334527 TMF1P82094 1093 aa31.41■■■□□ 2.62
NDEL1-201ENST00000334527 WASHC2CQ9Y4E1 1318 aa31.39■■■□□ 2.62
NDEL1-201ENST00000334527 ZFYVE16Q7Z3T8 1539 aa31.39■■■□□ 2.62
NDEL1-201ENST00000334527 RTEL1-TNFRSF6BF6WH68 1400 aa31.38■■■□□ 2.61
NDEL1-201ENST00000334527 AFAP1Q8N556 730 aa31.38■■■□□ 2.61
NDEL1-201ENST00000334527 ARAP3Q8WWN8 1544 aa31.38■■■□□ 2.61
NDEL1-201ENST00000334527 PANK3Q9H999 370 aa31.37■■■□□ 2.61
NDEL1-201ENST00000334527 CC2D1BQ5T0F9 858 aaKnown RBP31.37■■■□□ 2.61
NDEL1-201ENST00000334527 CCDC136Q96JN2 1154 aa31.35■■■□□ 2.61
NDEL1-201ENST00000334527 MADDQ8WXG6 1647 aa31.34■■■□□ 2.61
NDEL1-201ENST00000334527 TRPM2O94759 1503 aa31.34■■■□□ 2.61
NDEL1-201ENST00000334527 SPHKAPQ2M3C7 1700 aa31.31■■■□□ 2.6
NDEL1-201ENST00000334527 SALL2Q9Y467 1007 aaPredicted RBP31.31■■■□□ 2.6
NDEL1-201ENST00000334527 CEP152O94986 1710 aa31.3■■■□□ 2.6
NDEL1-201ENST00000334527 DEPDC5O75140 1603 aa31.3■■■□□ 2.6
NDEL1-201ENST00000334527 IQGAP1P46940 1657 aa31.28■■■□□ 2.6
NDEL1-201ENST00000334527 PTPRTO14522 1441 aa31.27■■■□□ 2.6
NDEL1-201ENST00000334527 WDR7Q9Y4E6 1490 aa31.27■■■□□ 2.6
NDEL1-201ENST00000334527 CLTCL1P53675 1640 aa31.27■■■□□ 2.6
NDEL1-201ENST00000334527 PDE3BQ13370 1112 aa31.25■■■□□ 2.59
NDEL1-201ENST00000334527 TET3O43151 1660 aa31.25■■■□□ 2.59
NDEL1-201ENST00000334527 ATP7AQ04656 1500 aa31.24■■■□□ 2.59
NDEL1-201ENST00000334527 FANCAO15360 1455 aa31.24■■■□□ 2.59
NDEL1-201ENST00000334527 RRP1P56182 461 aaKnown RBP31.24■■■□□ 2.59
NDEL1-201ENST00000334527 INO80Q9ULG1 1556 aaPredicted RBP31.23■■■□□ 2.59
NDEL1-201ENST00000334527 ABCA9Q8IUA7 1624 aa31.23■■■□□ 2.59
NDEL1-201ENST00000334527 RCAN3Q9UKA8 241 aa31.23■■■□□ 2.59
NDEL1-201ENST00000334527 BLMP54132 1417 aaPredicted RBP31.21■■■□□ 2.59
NDEL1-201ENST00000334527 INSRP06213 1382 aa31.21■■■□□ 2.59
NDEL1-201ENST00000334527 KANK1Q14678 1352 aa31.2■■■□□ 2.59
NDEL1-201ENST00000334527 ZMYM4Q5VZL5 1548 aa31.2■■■□□ 2.58
NDEL1-201ENST00000334527 STAC3Q96MF2 364 aa31.2■■■□□ 2.58
NDEL1-201ENST00000334527 SCAF11Q99590 1463 aaKnown RBP31.18■■■□□ 2.58
NDEL1-201ENST00000334527 SCAPERQ9BY12 1400 aa31.18■■■□□ 2.58
NDEL1-201ENST00000334527 VWDEQ8N2E2 1590 aa31.17■■■□□ 2.58
NDEL1-201ENST00000334527 ERICH6Q7L0X2 663 aa31.16■■■□□ 2.58
NDEL1-201ENST00000334527 MYT1LQ9UL68 1186 aa31.16■■■□□ 2.58
NDEL1-201ENST00000334527 KIF3BO15066 747 aa31.15■■■□□ 2.58
NDEL1-201ENST00000334527 CDCA7LQ96GN5 454 aa31.15■■■□□ 2.58
NDEL1-201ENST00000334527 ADGRL1O94910 1474 aa31.14■■■□□ 2.58
NDEL1-201ENST00000334527 KNSTRNQ9Y448 316 aa31.13■■■□□ 2.57
NDEL1-201ENST00000334527 CDCA8Q53HL2 280 aa31.12■■■□□ 2.57
NDEL1-201ENST00000334527 SYNMO15061 1565 aa31.11■■■□□ 2.57
NDEL1-201ENST00000334527 EXOC6Q8TAG9 804 aa31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms