RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 STRCQ7RTU9 1775 aa17.01■□□□□ 0.31
APOBEC3B-201ENST00000333467 DNMT1P26358 1616 aaKnown RBP17■□□□□ 0.31
APOBEC3B-201ENST00000333467 EIF2AK4Q9P2K8 1649 aaKnown RBP17■□□□□ 0.31
APOBEC3B-201ENST00000333467 HSPA2P54652 639 aa17■□□□□ 0.31
APOBEC3B-201ENST00000333467 RNF17Q9BXT8 1623 aaKnown RBP17■□□□□ 0.31
APOBEC3B-201ENST00000333467 APLP2Q06481 763 aa16.99■□□□□ 0.31
APOBEC3B-201ENST00000333467 KDM5DQ9BY66 1539 aa16.98■□□□□ 0.31
APOBEC3B-201ENST00000333467 FAM135AQ9P2D6 1515 aa16.98■□□□□ 0.31
APOBEC3B-201ENST00000333467 DHX29Q7Z478 1369 aaKnown RBP16.98■□□□□ 0.31
APOBEC3B-201ENST00000333467 ZC3H13Q5T200 1668 aaKnown RBP16.97■□□□□ 0.31
APOBEC3B-201ENST00000333467 RSPH4AQ5TD94 716 aa16.97■□□□□ 0.31
APOBEC3B-201ENST00000333467 SHANK2Q9UPX8 1470 aa16.96■□□□□ 0.31
APOBEC3B-201ENST00000333467 NPATQ14207 1427 aa16.96■□□□□ 0.31
APOBEC3B-201ENST00000333467 FGD6Q6ZV73 1430 aa16.96■□□□□ 0.31
APOBEC3B-201ENST00000333467 DCAF8L1A6NGE4 600 aa16.96■□□□□ 0.3
APOBEC3B-201ENST00000333467 TCOF1Q13428 1488 aaKnown RBP16.95■□□□□ 0.3
APOBEC3B-201ENST00000333467 CEP152O94986 1710 aa16.94■□□□□ 0.3
APOBEC3B-201ENST00000333467 ZMYM3Q14202 1370 aa16.94■□□□□ 0.3
APOBEC3B-201ENST00000333467 GGT6Q6P531 493 aa16.94■□□□□ 0.3
APOBEC3B-201ENST00000333467 MROH1Q8NDA8 1641 aa16.94■□□□□ 0.3
APOBEC3B-201ENST00000333467 CEP170BQ9Y4F5 1589 aaPredicted RBP16.93■□□□□ 0.3
APOBEC3B-201ENST00000333467 TSPY4P0CV99 314 aa16.92■□□□□ 0.3
APOBEC3B-201ENST00000333467 TSPY10P0CW01 314 aa16.92■□□□□ 0.3
APOBEC3B-201ENST00000333467 DUOX2Q9NRD8 1548 aa16.92■□□□□ 0.3
APOBEC3B-201ENST00000333467 PTPRKQ15262 1439 aa16.91■□□□□ 0.3
APOBEC3B-201ENST00000333467 DAPK1P53355 1430 aa16.91■□□□□ 0.3
APOBEC3B-201ENST00000333467 ABCC5O15440 1437 aa16.9■□□□□ 0.3
APOBEC3B-201ENST00000333467 CAMSAP1Q5T5Y3 1602 aa16.9■□□□□ 0.3
APOBEC3B-201ENST00000333467 KIF3BO15066 747 aa16.89■□□□□ 0.29
APOBEC3B-201ENST00000333467 DEPDC5O75140 1603 aa16.89■□□□□ 0.29
APOBEC3B-201ENST00000333467 ABCC3O15438 1527 aa16.88■□□□□ 0.29
APOBEC3B-201ENST00000333467 PRDM15P57071 1507 aaPredicted RBP16.88■□□□□ 0.29
APOBEC3B-201ENST00000333467 PZPP20742 1482 aa16.88■□□□□ 0.29
APOBEC3B-201ENST00000333467 POLR1AO95602 1720 aaPredicted RBP16.86■□□□□ 0.29
APOBEC3B-201ENST00000333467 KIF15Q9NS87 1388 aa16.85■□□□□ 0.29
APOBEC3B-201ENST00000333467 NCOA1Q15788 1441 aa16.85■□□□□ 0.29
APOBEC3B-201ENST00000333467 ERBINQ96RT1 1412 aa16.85■□□□□ 0.29
APOBEC3B-201ENST00000333467 CFAP65Q6ZU64 1925 aaKnown RBP16.83■□□□□ 0.28
APOBEC3B-201ENST00000333467 ILDR1Q86SU0 546 aaPredicted RBP16.82■□□□□ 0.28
APOBEC3B-201ENST00000333467 A2ML1A8K2U0 1454 aa16.81■□□□□ 0.28
APOBEC3B-201ENST00000333467 PLA2R1Q13018 1463 aa16.81■□□□□ 0.28
APOBEC3B-201ENST00000333467 WASHC2CQ9Y4E1 1318 aa16.81■□□□□ 0.28
APOBEC3B-201ENST00000333467 SPATA31D1Q6ZQQ2 1576 aa16.81■□□□□ 0.28
APOBEC3B-201ENST00000333467 ADGRL2O95490 1459 aa16.8■□□□□ 0.28
APOBEC3B-201ENST00000333467 TNRQ92752 1358 aa16.78■□□□□ 0.28
APOBEC3B-201ENST00000333467 PTPRTO14522 1441 aa16.78■□□□□ 0.28
APOBEC3B-201ENST00000333467 ANKRD30AQ9BXX3 1397 aa16.77■□□□□ 0.27
APOBEC3B-201ENST00000333467 ERVK-7P63135 1459 aa16.77■□□□□ 0.27
APOBEC3B-201ENST00000333467 RRP7BPQ9NSQ0 103 aa16.76■□□□□ 0.27
APOBEC3B-201ENST00000333467 C1QBPQ07021 282 aaKnown RBP16.75■□□□□ 0.27
APOBEC3B-201ENST00000333467 NLRP1Q9C000 1473 aa16.75■□□□□ 0.27
APOBEC3B-201ENST00000333467 VWDEQ8N2E2 1590 aa16.75■□□□□ 0.27
APOBEC3B-201ENST00000333467 NEURL4Q96JN8 1562 aa16.75■□□□□ 0.27
APOBEC3B-201ENST00000333467 UBR1Q8IWV7 1749 aa16.75■□□□□ 0.27
APOBEC3B-201ENST00000333467 FAM50AQ14320 339 aaKnown RBP16.75■□□□□ 0.27
APOBEC3B-201ENST00000333467 FBXO31Q5XUX0 539 aaPredicted RBP16.75■□□□□ 0.27
APOBEC3B-201ENST00000333467 CHIC2Q9UKJ5 165 aa16.74■□□□□ 0.27
APOBEC3B-201ENST00000333467 UGGT1Q9NYU2 1555 aa16.74■□□□□ 0.27
APOBEC3B-201ENST00000333467 LTBP4Q8N2S1 1624 aa16.72■□□□□ 0.27
APOBEC3B-201ENST00000333467 EFCAB6Q5THR3 1501 aa16.72■□□□□ 0.27
APOBEC3B-201ENST00000333467 UNC13BO14795 1591 aa16.72■□□□□ 0.27
APOBEC3B-201ENST00000333467 LMTK2Q8IWU2 1503 aa16.71■□□□□ 0.27
APOBEC3B-201ENST00000333467 PPARGC1BQ86YN6 1023 aaKnown RBP16.71■□□□□ 0.27
APOBEC3B-201ENST00000333467 FBXO41Q8TF61 875 aa16.7■□□□□ 0.26
APOBEC3B-201ENST00000333467 GCC2Q8IWJ2 1684 aa16.7■□□□□ 0.26
APOBEC3B-201ENST00000333467 ARHGAP31Q2M1Z3 1444 aa16.69■□□□□ 0.26
APOBEC3B-201ENST00000333467 PIK3C2BO00750 1634 aa16.69■□□□□ 0.26
APOBEC3B-201ENST00000333467 TET3O43151 1660 aa16.69■□□□□ 0.26
APOBEC3B-201ENST00000333467 IQGAP1P46940 1657 aa16.69■□□□□ 0.26
APOBEC3B-201ENST00000333467 NCKAP5LQ9HCH0 1330 aa16.69■□□□□ 0.26
APOBEC3B-201ENST00000333467 KANK1Q14678 1352 aa16.68■□□□□ 0.26
APOBEC3B-201ENST00000333467 ANKRD50Q9ULJ7 1429 aa16.67■□□□□ 0.26
APOBEC3B-201ENST00000333467 CERKQ8TCT0 537 aa16.67■□□□□ 0.26
APOBEC3B-201ENST00000333467 SYNMO15061 1565 aa16.66■□□□□ 0.26
APOBEC3B-201ENST00000333467 KDM5AP29375 1690 aaKnown RBP16.66■□□□□ 0.26
APOBEC3B-201ENST00000333467 PKD2Q13563 968 aa16.65■□□□□ 0.26
APOBEC3B-201ENST00000333467 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.65■□□□□ 0.26
APOBEC3B-201ENST00000333467 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.64■□□□□ 0.26
APOBEC3B-201ENST00000333467 IQGAP3Q86VI3 1631 aa16.64■□□□□ 0.25
APOBEC3B-201ENST00000333467 ROCK1Q13464 1354 aa16.63■□□□□ 0.25
APOBEC3B-201ENST00000333467 POTEHQ6S545 545 aa16.63■□□□□ 0.25
APOBEC3B-201ENST00000333467 MYO5BQ9ULV0 1848 aa16.62■□□□□ 0.25
APOBEC3B-201ENST00000333467 E9PCH4 1651 aa16.62■□□□□ 0.25
APOBEC3B-201ENST00000333467 IQSEC2Q5JU85 1478 aa16.61■□□□□ 0.25
APOBEC3B-201ENST00000333467 MED14O60244 1454 aa16.61■□□□□ 0.25
APOBEC3B-201ENST00000333467 RRBP1Q9P2E9 1410 aaKnown RBP16.6■□□□□ 0.25
APOBEC3B-201ENST00000333467 ZNF335Q9H4Z2 1342 aaPredicted RBP16.6■□□□□ 0.25
APOBEC3B-201ENST00000333467 ADGRB3O60242 1522 aa16.59■□□□□ 0.25
APOBEC3B-201ENST00000333467 SLIT1O75093 1534 aa16.59■□□□□ 0.25
APOBEC3B-201ENST00000333467 RPRD2Q5VT52 1461 aaKnown RBP16.59■□□□□ 0.25
APOBEC3B-201ENST00000333467 HOXD11P31277 338 aaPredicted RBP16.59■□□□□ 0.25
APOBEC3B-201ENST00000333467 STRCP1A6NGW2 1772 aa16.58■□□□□ 0.24
APOBEC3B-201ENST00000333467 THEMISQ8N1K5 641 aaPredicted RBP16.58■□□□□ 0.24
APOBEC3B-201ENST00000333467 NPHP4O75161 1426 aaPredicted RBP16.58■□□□□ 0.24
APOBEC3B-201ENST00000333467 ARHGAP23Q9P227 1491 aa16.57■□□□□ 0.24
APOBEC3B-201ENST00000333467 NOS1P29475 1434 aa16.57■□□□□ 0.24
APOBEC3B-201ENST00000333467 SCAF11Q99590 1463 aaKnown RBP16.56■□□□□ 0.24
APOBEC3B-201ENST00000333467 ITGAEP38570 1179 aa16.56■□□□□ 0.24
APOBEC3B-201ENST00000333467 ANKLE2Q86XL3 938 aa16.55■□□□□ 0.24
APOBEC3B-201ENST00000333467 CPS1P31327 1500 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms