RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 CCDC141Q6ZP82 1450 aa24.44■■□□□ 1.5
CLSTN3-202ENST00000331148 PLEKHH2Q8IVE3 1493 aa24.44■■□□□ 1.5
CLSTN3-202ENST00000331148 L3MBTL2Q969R5 705 aa24.44■■□□□ 1.5
CLSTN3-202ENST00000331148 NUDCQ9Y266 331 aa24.44■■□□□ 1.5
CLSTN3-202ENST00000331148 ARAP3Q8WWN8 1544 aa24.43■■□□□ 1.5
CLSTN3-202ENST00000331148 KIAA1107Q9UPP5 1409 aa24.43■■□□□ 1.5
CLSTN3-202ENST00000331148 SYCP2Q9BX26 1530 aa24.41■■□□□ 1.5
CLSTN3-202ENST00000331148 KIF7Q2M1P5 1343 aa24.41■■□□□ 1.5
CLSTN3-202ENST00000331148 MPHOSPH9Q99550 1183 aa24.38■■□□□ 1.49
CLSTN3-202ENST00000331148 POLR1AO95602 1720 aaPredicted RBP24.37■■□□□ 1.49
CLSTN3-202ENST00000331148 ABCA9Q8IUA7 1624 aa24.37■■□□□ 1.49
CLSTN3-202ENST00000331148 SPATA31E1Q6ZUB1 1445 aa24.36■■□□□ 1.49
CLSTN3-202ENST00000331148 ANKRD50Q9ULJ7 1429 aa24.36■■□□□ 1.49
CLSTN3-202ENST00000331148 SALL2Q9Y467 1007 aaPredicted RBP24.35■■□□□ 1.49
CLSTN3-202ENST00000331148 IL27Q8NEV9 243 aa24.34■■□□□ 1.49
CLSTN3-202ENST00000331148 NBPF8Q3BBV2 869 aa24.33■■□□□ 1.49
CLSTN3-202ENST00000331148 ARHGEF12Q9NZN5 1544 aa24.33■■□□□ 1.49
CLSTN3-202ENST00000331148 MAST1Q9Y2H9 1570 aa24.33■■□□□ 1.49
CLSTN3-202ENST00000331148 KIF15Q9NS87 1388 aa24.32■■□□□ 1.48
CLSTN3-202ENST00000331148 CYB5RLQ6IPT4 315 aa24.32■■□□□ 1.48
CLSTN3-202ENST00000331148 TEX14Q8IWB6 1497 aa24.31■■□□□ 1.48
CLSTN3-202ENST00000331148 ABCC1P33527 1531 aa24.31■■□□□ 1.48
CLSTN3-202ENST00000331148 RPRD2Q5VT52 1461 aaKnown RBP24.3■■□□□ 1.48
CLSTN3-202ENST00000331148 DHX29Q7Z478 1369 aaKnown RBP24.3■■□□□ 1.48
CLSTN3-202ENST00000331148 FOXD1Q16676 465 aa24.28■■□□□ 1.48
CLSTN3-202ENST00000331148 SLC4A1APQ9BWU0 796 aaKnown RBP24.28■■□□□ 1.48
CLSTN3-202ENST00000331148 FANCAO15360 1455 aa24.27■■□□□ 1.48
CLSTN3-202ENST00000331148 ANKRD30BQ9BXX2 1392 aa24.25■■□□□ 1.47
CLSTN3-202ENST00000331148 PLXNC1O60486 1568 aa24.24■■□□□ 1.47
CLSTN3-202ENST00000331148 TRAPPC8Q9Y2L5 1435 aa24.24■■□□□ 1.47
CLSTN3-202ENST00000331148 PZPP20742 1482 aa24.23■■□□□ 1.47
CLSTN3-202ENST00000331148 USP35Q9P2H5 1018 aa24.21■■□□□ 1.47
CLSTN3-202ENST00000331148 NPM2Q86SE8 214 aaKnown RBP24.2■■□□□ 1.46
CLSTN3-202ENST00000331148 RTN4Q9NQC3 1192 aaKnown RBP24.19■■□□□ 1.46
CLSTN3-202ENST00000331148 CD109Q6YHK3 1445 aa24.19■■□□□ 1.46
CLSTN3-202ENST00000331148 NEFMP07197 916 aa24.19■■□□□ 1.46
CLSTN3-202ENST00000331148 AFAP1Q8N556 730 aa24.19■■□□□ 1.46
CLSTN3-202ENST00000331148 NUP155O75694 1391 aa24.19■■□□□ 1.46
CLSTN3-202ENST00000331148 TCERG1O14776 1098 aaKnown RBP24.18■■□□□ 1.46
CLSTN3-202ENST00000331148 LAS1LQ9Y4W2 734 aaKnown RBP24.18■■□□□ 1.46
CLSTN3-202ENST00000331148 SPAG9O60271 1321 aaKnown RBP24.17■■□□□ 1.46
CLSTN3-202ENST00000331148 ADGRL1O94910 1474 aa24.17■■□□□ 1.46
CLSTN3-202ENST00000331148 KDM5DQ9BY66 1539 aa24.16■■□□□ 1.46
CLSTN3-202ENST00000331148 CFAP74Q9C0B2 1584 aa24.16■■□□□ 1.46
CLSTN3-202ENST00000331148 CNGB1Q14028 1251 aaPredicted RBP24.16■■□□□ 1.46
CLSTN3-202ENST00000331148 RTEL1-TNFRSF6BF6WH68 1400 aa24.15■■□□□ 1.46
CLSTN3-202ENST00000331148 SCAPERQ9BY12 1400 aa24.15■■□□□ 1.46
CLSTN3-202ENST00000331148 DUOX2Q9NRD8 1548 aa24.15■■□□□ 1.46
CLSTN3-202ENST00000331148 PNISRQ8TF01 805 aaKnown RBP24.15■■□□□ 1.46
CLSTN3-202ENST00000331148 WASHC2CQ9Y4E1 1318 aa24.14■■□□□ 1.46
CLSTN3-202ENST00000331148 SENP3-EIF4A1A0A087X0R7 540 aa24.13■■□□□ 1.45
CLSTN3-202ENST00000331148 PKD2Q13563 968 aa24.13■■□□□ 1.45
CLSTN3-202ENST00000331148 PDE4AP27815 886 aa24.13■■□□□ 1.45
CLSTN3-202ENST00000331148 RRP1P56182 461 aaKnown RBP24.12■■□□□ 1.45
CLSTN3-202ENST00000331148 BCORL1Q5H9F3 1711 aa24.11■■□□□ 1.45
CLSTN3-202ENST00000331148 ERBINQ96RT1 1412 aa24.09■■□□□ 1.45
CLSTN3-202ENST00000331148 PPM1GO15355 546 aaPredicted RBP24.09■■□□□ 1.45
CLSTN3-202ENST00000331148 EXOC6Q8TAG9 804 aa24.09■■□□□ 1.45
CLSTN3-202ENST00000331148 BACH2Q9BYV9 841 aa24.09■■□□□ 1.45
CLSTN3-202ENST00000331148 ZFYVE16Q7Z3T8 1539 aa24.09■■□□□ 1.45
CLSTN3-202ENST00000331148 USP47Q96K76 1375 aa24.08■■□□□ 1.45
CLSTN3-202ENST00000331148 MS4A1P11836 297 aa24.08■■□□□ 1.44
CLSTN3-202ENST00000331148 LRPPRCP42704 1394 aaKnown RBP24.07■■□□□ 1.44
CLSTN3-202ENST00000331148 TMC1Q8TDI8 760 aa24.07■■□□□ 1.44
CLSTN3-202ENST00000331148 POLR3GLQ9BT43 218 aa24.07■■□□□ 1.44
CLSTN3-202ENST00000331148 UNC13BO14795 1591 aa24.07■■□□□ 1.44
CLSTN3-202ENST00000331148 ARID4BQ4LE39 1312 aaPredicted RBP24.05■■□□□ 1.44
CLSTN3-202ENST00000331148 ATP7AQ04656 1500 aa24.05■■□□□ 1.44
CLSTN3-202ENST00000331148 INO80Q9ULG1 1556 aaPredicted RBP24.05■■□□□ 1.44
CLSTN3-202ENST00000331148 FAM135AQ9P2D6 1515 aa24.04■■□□□ 1.44
CLSTN3-202ENST00000331148 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.03■■□□□ 1.44
CLSTN3-202ENST00000331148 ZNF518AQ6AHZ1 1483 aa24.02■■□□□ 1.44
CLSTN3-202ENST00000331148 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.02■■□□□ 1.44
CLSTN3-202ENST00000331148 GLI2P10070 1586 aa24.02■■□□□ 1.44
CLSTN3-202ENST00000331148 ROCK2O75116 1388 aaKnown RBP24.01■■□□□ 1.43
CLSTN3-202ENST00000331148 KDM5CP41229 1560 aa24.01■■□□□ 1.43
CLSTN3-202ENST00000331148 NEO1Q92859 1461 aa24.01■■□□□ 1.43
CLSTN3-202ENST00000331148 RCAN3Q9UKA8 241 aa24■■□□□ 1.43
CLSTN3-202ENST00000331148 MAP3K4Q9Y6R4 1608 aa24■■□□□ 1.43
CLSTN3-202ENST00000331148 MAGI2Q86UL8 1455 aa23.99■■□□□ 1.43
CLSTN3-202ENST00000331148 BRD4O60885 1362 aaPredicted RBP23.98■■□□□ 1.43
CLSTN3-202ENST00000331148 POGZQ7Z3K3 1410 aa23.97■■□□□ 1.43
CLSTN3-202ENST00000331148 IQGAP3Q86VI3 1631 aa23.97■■□□□ 1.43
CLSTN3-202ENST00000331148 FAM69CQ0P6D2 419 aa23.96■■□□□ 1.43
CLSTN3-202ENST00000331148 DDRGK1Q96HY6 314 aa23.95■■□□□ 1.43
CLSTN3-202ENST00000331148 KIDINS220Q9ULH0 1771 aa23.95■■□□□ 1.42
CLSTN3-202ENST00000331148 BRPF3Q9ULD4 1205 aa23.94■■□□□ 1.42
CLSTN3-202ENST00000331148 MYBBP1AQ9BQG0 1328 aaKnown RBP23.94■■□□□ 1.42
CLSTN3-202ENST00000331148 DIP2BQ9P265 1576 aa23.93■■□□□ 1.42
CLSTN3-202ENST00000331148 ZNF326Q5BKZ1 582 aaKnown RBP23.93■■□□□ 1.42
CLSTN3-202ENST00000331148 EIF2AK4Q9P2K8 1649 aaKnown RBP23.92■■□□□ 1.42
CLSTN3-202ENST00000331148 GSE1Q14687 1217 aa23.92■■□□□ 1.42
CLSTN3-202ENST00000331148 KTN1Q86UP2 1357 aaKnown RBP23.92■■□□□ 1.42
CLSTN3-202ENST00000331148 MLH3Q9UHC1 1453 aa23.91■■□□□ 1.42
CLSTN3-202ENST00000331148 DEPDC5O75140 1603 aa23.89■■□□□ 1.42
CLSTN3-202ENST00000331148 KIF3BO15066 747 aa23.89■■□□□ 1.41
CLSTN3-202ENST00000331148 RALBP1Q15311 655 aa23.89■■□□□ 1.41
CLSTN3-202ENST00000331148 PDE3BQ13370 1112 aa23.88■■□□□ 1.41
CLSTN3-202ENST00000331148 RAPGEF3O95398 923 aa23.87■■□□□ 1.41
CLSTN3-202ENST00000331148 RALGAPBQ86X10 1494 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms