RNA–Protein interactions for RNA: ENST00000330688.8

RARB-201, Transcript of retinoic acid receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARB, Length 3,084 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-201ENST00000330688 SHROOM2Q13796 1616 aa13.7□□□□□ -0.22
RARB-201ENST00000330688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.69□□□□□ -0.22
RARB-201ENST00000330688 PLA2R1Q13018 1463 aa13.68□□□□□ -0.22
RARB-201ENST00000330688 RGL3Q3MIN7 710 aa13.68□□□□□ -0.22
RARB-201ENST00000330688 CCDC144AA2RUR9 1427 aa13.68□□□□□ -0.22
RARB-201ENST00000330688 PPP4R2Q9NY27 417 aa13.67□□□□□ -0.22
RARB-201ENST00000330688 ABCC2Q92887 1545 aa13.67□□□□□ -0.22
RARB-201ENST00000330688 PNISRQ8TF01 805 aaKnown RBP13.67□□□□□ -0.22
RARB-201ENST00000330688 MAST1Q9Y2H9 1570 aa13.67□□□□□ -0.22
RARB-201ENST00000330688 PLEKHH2Q8IVE3 1493 aa13.66□□□□□ -0.22
RARB-201ENST00000330688 PRAG1Q86YV5 1406 aa13.66□□□□□ -0.22
RARB-201ENST00000330688 NBPF1Q3BBV0 1214 aa13.66□□□□□ -0.22
RARB-201ENST00000330688 TMC1Q8TDI8 760 aa13.65□□□□□ -0.23
RARB-201ENST00000330688 UNC13BO14795 1591 aa13.64□□□□□ -0.23
RARB-201ENST00000330688 SMG6Q86US8 1419 aaKnown RBP13.63□□□□□ -0.23
RARB-201ENST00000330688 SENP3-EIF4A1A0A087X0R7 540 aa13.63□□□□□ -0.23
RARB-201ENST00000330688 A2MP01023 1474 aa13.62□□□□□ -0.23
RARB-201ENST00000330688 ANP32EQ9BTT0 268 aa13.62□□□□□ -0.23
RARB-201ENST00000330688 PLCH2O75038 1416 aa13.62□□□□□ -0.23
RARB-201ENST00000330688 PLXNC1O60486 1568 aa13.62□□□□□ -0.23
RARB-201ENST00000330688 B4GALNT3Q6L9W6 998 aa13.62□□□□□ -0.23
RARB-201ENST00000330688 NUDCQ9Y266 331 aa13.62□□□□□ -0.23
RARB-201ENST00000330688 TRPM1Q7Z4N2 1603 aa13.61□□□□□ -0.23
RARB-201ENST00000330688 MYO5CQ9NQX4 1742 aa13.61□□□□□ -0.23
RARB-201ENST00000330688 RALBP1Q15311 655 aa13.61□□□□□ -0.23
RARB-201ENST00000330688 GPRASP1Q5JY77 1395 aa13.61□□□□□ -0.23
RARB-201ENST00000330688 MYBBP1AQ9BQG0 1328 aaKnown RBP13.61□□□□□ -0.23
RARB-201ENST00000330688 EFCAB2Q5VUJ9 269 aa13.6□□□□□ -0.23
RARB-201ENST00000330688 DUOX2Q9NRD8 1548 aa13.6□□□□□ -0.23
RARB-201ENST00000330688 IQGAP3Q86VI3 1631 aa13.6□□□□□ -0.23
RARB-201ENST00000330688 BRD4O60885 1362 aaPredicted RBP13.59□□□□□ -0.23
RARB-201ENST00000330688 LRPPRCP42704 1394 aaKnown RBP13.59□□□□□ -0.23
RARB-201ENST00000330688 KTN1Q86UP2 1357 aaKnown RBP13.59□□□□□ -0.23
RARB-201ENST00000330688 ERBINQ96RT1 1412 aa13.58□□□□□ -0.24
RARB-201ENST00000330688 PER1O15534 1290 aaPredicted RBP13.58□□□□□ -0.24
RARB-201ENST00000330688 TESK2Q96S53 571 aa13.58□□□□□ -0.24
RARB-201ENST00000330688 TRAPPC8Q9Y2L5 1435 aa13.58□□□□□ -0.24
RARB-201ENST00000330688 E9PCH4 1651 aa13.58□□□□□ -0.24
RARB-201ENST00000330688 RNF123Q5XPI4 1314 aa13.58□□□□□ -0.24
RARB-201ENST00000330688 ATP10AO60312 1499 aa13.58□□□□□ -0.24
RARB-201ENST00000330688 MAGI2Q86UL8 1455 aa13.58□□□□□ -0.24
RARB-201ENST00000330688 ZCCHC11Q5TAX3 1644 aaKnown RBP13.57□□□□□ -0.24
RARB-201ENST00000330688 UHRF1BP1LA0JNW5 1464 aa13.56□□□□□ -0.24
RARB-201ENST00000330688 DISP3Q9P2K9 1392 aa13.55□□□□□ -0.24
RARB-201ENST00000330688 PARD3Q8TEW0 1356 aa13.55□□□□□ -0.24
RARB-201ENST00000330688 CLASP1Q7Z460 1538 aa13.55□□□□□ -0.24
RARB-201ENST00000330688 ABCC1P33527 1531 aa13.54□□□□□ -0.24
RARB-201ENST00000330688 AFAP1Q8N556 730 aa13.54□□□□□ -0.24
RARB-201ENST00000330688 PRDM15P57071 1507 aaPredicted RBP13.54□□□□□ -0.24
RARB-201ENST00000330688 COL17A1Q9UMD9 1497 aaPredicted RBP13.54□□□□□ -0.24
RARB-201ENST00000330688 MSH5O43196 834 aa13.53□□□□□ -0.24
RARB-201ENST00000330688 NLRP13Q86W25 1043 aa13.53□□□□□ -0.24
RARB-201ENST00000330688 SPAG9O60271 1321 aaKnown RBP13.52□□□□□ -0.24
RARB-201ENST00000330688 LAMC1P11047 1609 aa13.52□□□□□ -0.25
RARB-201ENST00000330688 FANCIQ9NVI1 1328 aa13.51□□□□□ -0.25
RARB-201ENST00000330688 PANK3Q9H999 370 aa13.51□□□□□ -0.25
RARB-201ENST00000330688 CC2D1BQ5T0F9 858 aaKnown RBP13.5□□□□□ -0.25
RARB-201ENST00000330688 EIF2AK4Q9P2K8 1649 aaKnown RBP13.5□□□□□ -0.25
RARB-201ENST00000330688 TMF1P82094 1093 aa13.5□□□□□ -0.25
RARB-201ENST00000330688 WASHC2CQ9Y4E1 1318 aa13.49□□□□□ -0.25
RARB-201ENST00000330688 RTEL1-TNFRSF6BF6WH68 1400 aa13.49□□□□□ -0.25
RARB-201ENST00000330688 SALL2Q9Y467 1007 aaPredicted RBP13.48□□□□□ -0.25
RARB-201ENST00000330688 ZFYVE16Q7Z3T8 1539 aa13.46□□□□□ -0.25
RARB-201ENST00000330688 CCDC136Q96JN2 1154 aa13.46□□□□□ -0.25
RARB-201ENST00000330688 ARAP3Q8WWN8 1544 aa13.45□□□□□ -0.26
RARB-201ENST00000330688 PTPRTO14522 1441 aa13.45□□□□□ -0.26
RARB-201ENST00000330688 RNF17Q9BXT8 1623 aaKnown RBP13.45□□□□□ -0.26
RARB-201ENST00000330688 TRPM2O94759 1503 aa13.44□□□□□ -0.26
RARB-201ENST00000330688 WDR7Q9Y4E6 1490 aa13.43□□□□□ -0.26
RARB-201ENST00000330688 MADDQ8WXG6 1647 aa13.43□□□□□ -0.26
RARB-201ENST00000330688 RRP1P56182 461 aaKnown RBP13.43□□□□□ -0.26
RARB-201ENST00000330688 PDE3BQ13370 1112 aa13.43□□□□□ -0.26
RARB-201ENST00000330688 CDCA7LQ96GN5 454 aa13.43□□□□□ -0.26
RARB-201ENST00000330688 RCAN3Q9UKA8 241 aa13.42□□□□□ -0.26
RARB-201ENST00000330688 FANCAO15360 1455 aa13.42□□□□□ -0.26
RARB-201ENST00000330688 KIF3BO15066 747 aa13.42□□□□□ -0.26
RARB-201ENST00000330688 STAC3Q96MF2 364 aa13.41□□□□□ -0.26
RARB-201ENST00000330688 CLTCL1P53675 1640 aa13.41□□□□□ -0.26
RARB-201ENST00000330688 SCAPERQ9BY12 1400 aa13.4□□□□□ -0.26
RARB-201ENST00000330688 MYT1LQ9UL68 1186 aa13.4□□□□□ -0.26
RARB-201ENST00000330688 DEPDC5O75140 1603 aa13.4□□□□□ -0.26
RARB-201ENST00000330688 ATP7AQ04656 1500 aa13.4□□□□□ -0.26
RARB-201ENST00000330688 BLMP54132 1417 aaPredicted RBP13.4□□□□□ -0.26
RARB-201ENST00000330688 INSRP06213 1382 aa13.39□□□□□ -0.27
RARB-201ENST00000330688 KANK1Q14678 1352 aa13.39□□□□□ -0.27
RARB-201ENST00000330688 SCAF11Q99590 1463 aaKnown RBP13.39□□□□□ -0.27
RARB-201ENST00000330688 SPHKAPQ2M3C7 1700 aa13.39□□□□□ -0.27
RARB-201ENST00000330688 EXOC6Q8TAG9 804 aa13.39□□□□□ -0.27
RARB-201ENST00000330688 ABCA9Q8IUA7 1624 aa13.39□□□□□ -0.27
RARB-201ENST00000330688 VWDEQ8N2E2 1590 aa13.39□□□□□ -0.27
RARB-201ENST00000330688 IQGAP1P46940 1657 aa13.39□□□□□ -0.27
RARB-201ENST00000330688 KNSTRNQ9Y448 316 aa13.38□□□□□ -0.27
RARB-201ENST00000330688 INO80Q9ULG1 1556 aaPredicted RBP13.38□□□□□ -0.27
RARB-201ENST00000330688 AMER1Q5JTC6 1135 aaPredicted RBP13.38□□□□□ -0.27
RARB-201ENST00000330688 ADGRL1O94910 1474 aa13.38□□□□□ -0.27
RARB-201ENST00000330688 TET3O43151 1660 aa13.38□□□□□ -0.27
RARB-201ENST00000330688 CEP152O94986 1710 aa13.37□□□□□ -0.27
RARB-201ENST00000330688 ADAMTS8Q9UP79 889 aa13.37□□□□□ -0.27
RARB-201ENST00000330688 PPP2R1AP30153 589 aa13.37□□□□□ -0.27
RARB-201ENST00000330688 ZMYM4Q5VZL5 1548 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms