RNA–Protein interactions for RNA: ENST00000327443.8

SP1-201, Transcript of Sp1 transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SP1, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-201ENST00000327443 ANKRD30AQ9BXX3 1397 aa13.35□□□□□ -0.27
SP1-201ENST00000327443 C9orf84Q5VXU9 1444 aa13.34□□□□□ -0.27
SP1-201ENST00000327443 NEFMP07197 916 aa13.33□□□□□ -0.28
SP1-201ENST00000327443 HSP90AA2PQ14568 343 aaPredicted RBP13.33□□□□□ -0.28
SP1-201ENST00000327443 SYCP2Q9BX26 1530 aa13.33□□□□□ -0.28
SP1-201ENST00000327443 UNC13BO14795 1591 aa13.32□□□□□ -0.28
SP1-201ENST00000327443 NEO1Q92859 1461 aa13.32□□□□□ -0.28
SP1-201ENST00000327443 INO80Q9ULG1 1556 aaPredicted RBP13.32□□□□□ -0.28
SP1-201ENST00000327443 PAXIP1Q6ZW49 1069 aaPredicted RBP13.31□□□□□ -0.28
SP1-201ENST00000327443 EIF2AK4Q9P2K8 1649 aaKnown RBP13.3□□□□□ -0.28
SP1-201ENST00000327443 BCORL1Q5H9F3 1711 aa13.3□□□□□ -0.28
SP1-201ENST00000327443 DUOX2Q9NRD8 1548 aa13.3□□□□□ -0.28
SP1-201ENST00000327443 MAGI2Q86UL8 1455 aa13.3□□□□□ -0.28
SP1-201ENST00000327443 EFCAB2Q5VUJ9 269 aa13.3□□□□□ -0.28
SP1-201ENST00000327443 NPM1P06748 294 aaKnown RBP eCLIP13.29□□□□□ -0.28
SP1-201ENST00000327443 IRX6P78412 446 aaPredicted RBP13.29□□□□□ -0.28
SP1-201ENST00000327443 ERBINQ96RT1 1412 aa13.29□□□□□ -0.28
SP1-201ENST00000327443 KDM5CP41229 1560 aa13.28□□□□□ -0.28
SP1-201ENST00000327443 ZBTB47Q9UFB7 747 aaPredicted RBP13.28□□□□□ -0.28
SP1-201ENST00000327443 KDM6BO15054 1643 aa13.28□□□□□ -0.28
SP1-201ENST00000327443 ARID3CA6NKF2 412 aa13.28□□□□□ -0.28
SP1-201ENST00000327443 ZFYVE16Q7Z3T8 1539 aa13.27□□□□□ -0.28
SP1-201ENST00000327443 FANCAO15360 1455 aa13.27□□□□□ -0.28
SP1-201ENST00000327443 ARHGEF12Q9NZN5 1544 aa13.27□□□□□ -0.28
SP1-201ENST00000327443 DEPDC5O75140 1603 aa13.26□□□□□ -0.29
SP1-201ENST00000327443 DIP2BQ9P265 1576 aa13.26□□□□□ -0.29
SP1-201ENST00000327443 ZNF644Q9H582 1327 aaPredicted RBP13.25□□□□□ -0.29
SP1-201ENST00000327443 IPO9Q96P70 1041 aaKnown RBP13.25□□□□□ -0.29
SP1-201ENST00000327443 IQGAP3Q86VI3 1631 aa13.24□□□□□ -0.29
SP1-201ENST00000327443 RRP9O43818 475 aaKnown RBP13.24□□□□□ -0.29
SP1-201ENST00000327443 FAM43AQ8N2R8 423 aa13.24□□□□□ -0.29
SP1-201ENST00000327443 ANKRD50Q9ULJ7 1429 aa13.24□□□□□ -0.29
SP1-201ENST00000327443 TRIM52Q96A61 297 aa13.23□□□□□ -0.29
SP1-201ENST00000327443 ZNF518AQ6AHZ1 1483 aa13.23□□□□□ -0.29
SP1-201ENST00000327443 ATP7AQ04656 1500 aa13.22□□□□□ -0.29
SP1-201ENST00000327443 DENND4BO75064 1496 aaPredicted RBP13.22□□□□□ -0.29
SP1-201ENST00000327443 TSPY4P0CV99 314 aa13.22□□□□□ -0.29
SP1-201ENST00000327443 TSPY10P0CW01 314 aa13.22□□□□□ -0.29
SP1-201ENST00000327443 PZPP20742 1482 aa13.22□□□□□ -0.29
SP1-201ENST00000327443 MLH3Q9UHC1 1453 aa13.22□□□□□ -0.29
SP1-201ENST00000327443 ANP32AP39687 249 aaKnown RBP13.21□□□□□ -0.29
SP1-201ENST00000327443 NAP1L2Q9ULW6 460 aaPredicted RBP13.21□□□□□ -0.29
SP1-201ENST00000327443 ADGRL1O94910 1474 aa13.21□□□□□ -0.29
SP1-201ENST00000327443 ZMYM4Q5VZL5 1548 aa13.21□□□□□ -0.29
SP1-201ENST00000327443 LAS1LQ9Y4W2 734 aaKnown RBP13.21□□□□□ -0.29
SP1-201ENST00000327443 CD109Q6YHK3 1445 aa13.21□□□□□ -0.29
SP1-201ENST00000327443 KIF15Q9NS87 1388 aa13.21□□□□□ -0.3
SP1-201ENST00000327443 CHMP4BQ9H444 224 aaKnown RBP13.2□□□□□ -0.3
SP1-201ENST00000327443 POGZQ7Z3K3 1410 aa13.2□□□□□ -0.3
SP1-201ENST00000327443 ARXQ96QS3 562 aa13.2□□□□□ -0.3
SP1-201ENST00000327443 VWDEQ8N2E2 1590 aa13.19□□□□□ -0.3
SP1-201ENST00000327443 RNF17Q9BXT8 1623 aaKnown RBP13.19□□□□□ -0.3
SP1-201ENST00000327443 HECW2Q9P2P5 1572 aa13.19□□□□□ -0.3
SP1-201ENST00000327443 RICTORQ6R327 1708 aa13.19□□□□□ -0.3
SP1-201ENST00000327443 TEX14Q8IWB6 1497 aa13.19□□□□□ -0.3
SP1-201ENST00000327443 PPRC1Q5VV67 1664 aaKnown RBP13.19□□□□□ -0.3
SP1-201ENST00000327443 RGS3P49796 1198 aa13.18□□□□□ -0.3
SP1-201ENST00000327443 BBXQ8WY36 941 aaPredicted RBP13.18□□□□□ -0.3
SP1-201ENST00000327443 USP35Q9P2H5 1018 aa13.18□□□□□ -0.3
SP1-201ENST00000327443 REREQ9P2R6 1566 aa13.18□□□□□ -0.3
SP1-201ENST00000327443 FAM135AQ9P2D6 1515 aa13.18□□□□□ -0.3
SP1-201ENST00000327443 KIDINS220Q9ULH0 1771 aa13.18□□□□□ -0.3
SP1-201ENST00000327443 TRAPPC8Q9Y2L5 1435 aa13.18□□□□□ -0.3
SP1-201ENST00000327443 DHX37Q8IY37 1157 aaKnown RBP13.17□□□□□ -0.3
SP1-201ENST00000327443 HSP90AA1P07900 732 aaKnown RBP13.17□□□□□ -0.3
SP1-201ENST00000327443 GSE1Q14687 1217 aa13.17□□□□□ -0.3
SP1-201ENST00000327443 ATP10AO60312 1499 aa13.17□□□□□ -0.3
SP1-201ENST00000327443 NEURL4Q96JN8 1562 aa13.16□□□□□ -0.3
SP1-201ENST00000327443 PRDM15P57071 1507 aaPredicted RBP13.16□□□□□ -0.3
SP1-201ENST00000327443 KIF13AQ9H1H9 1805 aa13.15□□□□□ -0.3
SP1-201ENST00000327443 PRDM4Q9UKN5 801 aa13.15□□□□□ -0.3
SP1-201ENST00000327443 LMTK2Q8IWU2 1503 aa13.15□□□□□ -0.3
SP1-201ENST00000327443 HNRNPMP52272 730 aaKnown RBP eCLIP13.14□□□□□ -0.31
SP1-201ENST00000327443 RRP7BPQ9NSQ0 103 aa13.14□□□□□ -0.31
SP1-201ENST00000327443 ZNF777Q9ULD5 760 aaPredicted RBP13.14□□□□□ -0.31
SP1-201ENST00000327443 SCAPERQ9BY12 1400 aa13.14□□□□□ -0.31
SP1-201ENST00000327443 ANKRD30BQ9BXX2 1392 aa13.14□□□□□ -0.31
SP1-201ENST00000327443 RPRD2Q5VT52 1461 aaKnown RBP13.14□□□□□ -0.31
SP1-201ENST00000327443 NAP1L5Q96NT1 182 aaPredicted RBP13.13□□□□□ -0.31
SP1-201ENST00000327443 TET3O43151 1660 aa13.13□□□□□ -0.31
SP1-201ENST00000327443 FRMPD1Q5SYB0 1578 aa13.12□□□□□ -0.31
SP1-201ENST00000327443 MPHOSPH9Q99550 1183 aa13.12□□□□□ -0.31
SP1-201ENST00000327443 CHIC2Q9UKJ5 165 aa13.12□□□□□ -0.31
SP1-201ENST00000327443 SPAG9O60271 1321 aaKnown RBP13.11□□□□□ -0.31
SP1-201ENST00000327443 ZC3H13Q5T200 1668 aaKnown RBP13.11□□□□□ -0.31
SP1-201ENST00000327443 MROH1Q8NDA8 1641 aa13.1□□□□□ -0.31
SP1-201ENST00000327443 DHX29Q7Z478 1369 aaKnown RBP13.1□□□□□ -0.31
SP1-201ENST00000327443 B4GALNT3Q6L9W6 998 aa13.1□□□□□ -0.31
SP1-201ENST00000327443 FRAT1Q92837 279 aaPredicted RBP13.1□□□□□ -0.31
SP1-201ENST00000327443 GTF2E1P29083 439 aaPredicted RBP13.09□□□□□ -0.31
SP1-201ENST00000327443 PPP4R2Q9NY27 417 aa13.09□□□□□ -0.31
SP1-201ENST00000327443 ABCA6Q8N139 1617 aa13.08□□□□□ -0.31
SP1-201ENST00000327443 DIP2CQ9Y2E4 1556 aa13.08□□□□□ -0.32
SP1-201ENST00000327443 RRAGDQ9NQL2 400 aaPredicted RBP13.07□□□□□ -0.32
SP1-201ENST00000327443 DCAF11Q8TEB1 546 aa13.07□□□□□ -0.32
SP1-201ENST00000327443 AGLP35573 1532 aa13.06□□□□□ -0.32
SP1-201ENST00000327443 A2MP01023 1474 aa13.06□□□□□ -0.32
SP1-201ENST00000327443 CYB5RLQ6IPT4 315 aa13.06□□□□□ -0.32
SP1-201ENST00000327443 CHMP4AQ9BY43 222 aa13.06□□□□□ -0.32
SP1-201ENST00000327443 CALD1Q05682 793 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms