RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 WASHC2AQ641Q2 1341 aa12.75□□□□□ -0.37
CD46-202ENST00000322918 RIMBP3CA6NJZ7 1639 aa12.74□□□□□ -0.37
CD46-202ENST00000322918 RIMBP3BA6NNM3 1639 aa12.74□□□□□ -0.37
CD46-202ENST00000322918 ABCA9Q8IUA7 1624 aa12.74□□□□□ -0.37
CD46-202ENST00000322918 RIMBP3Q9UFD9 1639 aa12.74□□□□□ -0.37
CD46-202ENST00000322918 DUOX2Q9NRD8 1548 aa12.74□□□□□ -0.37
CD46-202ENST00000322918 ANP32CO43423 234 aa12.73□□□□□ -0.37
CD46-202ENST00000322918 NBPF1Q3BBV0 1214 aa12.73□□□□□ -0.37
CD46-202ENST00000322918 MLECQ14165 292 aa12.73□□□□□ -0.37
CD46-202ENST00000322918 ATP7AQ04656 1500 aa12.72□□□□□ -0.37
CD46-202ENST00000322918 ZFYVE16Q7Z3T8 1539 aa12.72□□□□□ -0.37
CD46-202ENST00000322918 NUTM2DQ5VT03 806 aaPredicted RBP12.71□□□□□ -0.38
CD46-202ENST00000322918 KANK1Q14678 1352 aa12.7□□□□□ -0.38
CD46-202ENST00000322918 ERBINQ96RT1 1412 aa12.7□□□□□ -0.38
CD46-202ENST00000322918 ST20-MTHFSA0A0A6YYL1 179 aa12.7□□□□□ -0.38
CD46-202ENST00000322918 WASHC2CQ9Y4E1 1318 aa12.7□□□□□ -0.38
CD46-202ENST00000322918 PLA2R1Q13018 1463 aa12.7□□□□□ -0.38
CD46-202ENST00000322918 MAST1Q9Y2H9 1570 aa12.69□□□□□ -0.38
CD46-202ENST00000322918 DHX29Q7Z478 1369 aaKnown RBP12.69□□□□□ -0.38
CD46-202ENST00000322918 USP47Q96K76 1375 aa12.69□□□□□ -0.38
CD46-202ENST00000322918 ROCK2O75116 1388 aaKnown RBP12.69□□□□□ -0.38
CD46-202ENST00000322918 PLXNC1O60486 1568 aa12.68□□□□□ -0.38
CD46-202ENST00000322918 ZNF518AQ6AHZ1 1483 aa12.68□□□□□ -0.38
CD46-202ENST00000322918 PLPPR3Q6T4P5 718 aa12.68□□□□□ -0.38
CD46-202ENST00000322918 TSPOAP1O95153 1857 aa12.68□□□□□ -0.38
CD46-202ENST00000322918 RTEL1-TNFRSF6BF6WH68 1400 aa12.67□□□□□ -0.38
CD46-202ENST00000322918 KIF7Q2M1P5 1343 aa12.67□□□□□ -0.38
CD46-202ENST00000322918 SENP3-EIF4A1A0A087X0R7 540 aa12.66□□□□□ -0.38
CD46-202ENST00000322918 CFAP65Q6ZU64 1925 aaKnown RBP12.66□□□□□ -0.38
CD46-202ENST00000322918 POGZQ7Z3K3 1410 aa12.66□□□□□ -0.38
CD46-202ENST00000322918 ARAP3Q8WWN8 1544 aa12.66□□□□□ -0.38
CD46-202ENST00000322918 KDM5DQ9BY66 1539 aa12.66□□□□□ -0.38
CD46-202ENST00000322918 YEATS2Q9ULM3 1422 aa12.65□□□□□ -0.39
CD46-202ENST00000322918 TRHP20396 242 aaPredicted RBP12.64□□□□□ -0.39
CD46-202ENST00000322918 A2MP01023 1474 aa12.64□□□□□ -0.39
CD46-202ENST00000322918 CCDC7Q96M83 1385 aa12.63□□□□□ -0.39
CD46-202ENST00000322918 UNC13BO14795 1591 aa12.63□□□□□ -0.39
CD46-202ENST00000322918 UGGT1Q9NYU2 1555 aa12.62□□□□□ -0.39
CD46-202ENST00000322918 KIDINS220Q9ULH0 1771 aa12.62□□□□□ -0.39
CD46-202ENST00000322918 INO80Q9ULG1 1556 aaPredicted RBP12.61□□□□□ -0.39
CD46-202ENST00000322918 IQGAP3Q86VI3 1631 aa12.61□□□□□ -0.39
CD46-202ENST00000322918 CCDC184Q52MB2 194 aa12.6□□□□□ -0.39
CD46-202ENST00000322918 ARID4BQ4LE39 1312 aaPredicted RBP12.6□□□□□ -0.39
CD46-202ENST00000322918 ATP10AO60312 1499 aa12.59□□□□□ -0.39
CD46-202ENST00000322918 CFAP70Q5T0N1 1121 aa12.58□□□□□ -0.4
CD46-202ENST00000322918 FBXO31Q5XUX0 539 aaPredicted RBP12.58□□□□□ -0.4
CD46-202ENST00000322918 FAM9BQ8IZU0 186 aa12.58□□□□□ -0.4
CD46-202ENST00000322918 SPATA31E1Q6ZUB1 1445 aa12.58□□□□□ -0.4
CD46-202ENST00000322918 E9PCH4 1651 aa12.57□□□□□ -0.4
CD46-202ENST00000322918 PRAG1Q86YV5 1406 aa12.57□□□□□ -0.4
CD46-202ENST00000322918 ADGRF5Q8IZF2 1346 aa12.57□□□□□ -0.4
CD46-202ENST00000322918 MAGI2Q86UL8 1455 aa12.57□□□□□ -0.4
CD46-202ENST00000322918 NEO1Q92859 1461 aa12.57□□□□□ -0.4
CD46-202ENST00000322918 BCL11AQ9H165 835 aa12.56□□□□□ -0.4
CD46-202ENST00000322918 HECW2Q9P2P5 1572 aa12.55□□□□□ -0.4
CD46-202ENST00000322918 MLH3Q9UHC1 1453 aa12.55□□□□□ -0.4
CD46-202ENST00000322918 TMEM132EQ6IEE7 984 aa12.55□□□□□ -0.4
CD46-202ENST00000322918 STAG3Q9UJ98 1225 aa12.55□□□□□ -0.4
CD46-202ENST00000322918 ABCA6Q8N139 1617 aa12.55□□□□□ -0.4
CD46-202ENST00000322918 MRS2Q9HD23 443 aa12.54□□□□□ -0.4
CD46-202ENST00000322918 RALGAPBQ86X10 1494 aa12.54□□□□□ -0.4
CD46-202ENST00000322918 UHRF1BP1Q6BDS2 1440 aa12.54□□□□□ -0.4
CD46-202ENST00000322918 CNTLNQ9NXG0 1405 aa12.54□□□□□ -0.4
CD46-202ENST00000322918 FRMPD1Q5SYB0 1578 aa12.53□□□□□ -0.4
CD46-202ENST00000322918 DIP2BQ9P265 1576 aa12.53□□□□□ -0.4
CD46-202ENST00000322918 PRDM15P57071 1507 aaPredicted RBP12.53□□□□□ -0.4
CD46-202ENST00000322918 NPATQ14207 1427 aa12.53□□□□□ -0.4
CD46-202ENST00000322918 SAFB2Q14151 953 aaKnown RBP eCLIP12.53□□□□□ -0.41e-6■■□□□ 13.1
CD46-202ENST00000322918 PRKRIP1Q9H875 184 aaPredicted RBP12.53□□□□□ -0.4
CD46-202ENST00000322918 CFAP74Q9C0B2 1584 aa12.53□□□□□ -0.4
CD46-202ENST00000322918 ESF1Q9H501 851 aaKnown RBP12.53□□□□□ -0.4
CD46-202ENST00000322918 HNRNPUQ00839 825 aaKnown RBP eCLIP12.52□□□□□ -0.4
CD46-202ENST00000322918 KDM5CP41229 1560 aa12.52□□□□□ -0.41
CD46-202ENST00000322918 CEP152O94986 1710 aa12.52□□□□□ -0.41
CD46-202ENST00000322918 TRAK1Q9UPV9 953 aa12.52□□□□□ -0.41
CD46-202ENST00000322918 CLTCL1P53675 1640 aa12.52□□□□□ -0.41
CD46-202ENST00000322918 MROH1Q8NDA8 1641 aa12.51□□□□□ -0.41
CD46-202ENST00000322918 MAP3K4Q9Y6R4 1608 aa12.51□□□□□ -0.41
CD46-202ENST00000322918 IDI1Q13907 227 aa12.51□□□□□ -0.41
CD46-202ENST00000322918 BCORL1Q5H9F3 1711 aa12.51□□□□□ -0.41
CD46-202ENST00000322918 COL17A1Q9UMD9 1497 aaPredicted RBP12.51□□□□□ -0.41
CD46-202ENST00000322918 CC2D1BQ5T0F9 858 aaKnown RBP12.5□□□□□ -0.41
CD46-202ENST00000322918 STK26Q9P289 416 aa12.5□□□□□ -0.41
CD46-202ENST00000322918 DISP3Q9P2K9 1392 aa12.49□□□□□ -0.41
CD46-202ENST00000322918 PTPRTO14522 1441 aa12.49□□□□□ -0.41
CD46-202ENST00000322918 TET3O43151 1660 aa12.49□□□□□ -0.41
CD46-202ENST00000322918 PPRC1Q5VV67 1664 aaKnown RBP12.49□□□□□ -0.41
CD46-202ENST00000322918 TRPM2O94759 1503 aa12.49□□□□□ -0.41
CD46-202ENST00000322918 DIP2CQ9Y2E4 1556 aa12.49□□□□□ -0.41
CD46-202ENST00000322918 CCER2I3L3R5 266 aa12.48□□□□□ -0.41
CD46-202ENST00000322918 NOS1P29475 1434 aa12.48□□□□□ -0.41
CD46-202ENST00000322918 DEPDC5O75140 1603 aa12.48□□□□□ -0.41
CD46-202ENST00000322918 SPHKAPQ2M3C7 1700 aa12.48□□□□□ -0.41
CD46-202ENST00000322918 TMF1P82094 1093 aa12.47□□□□□ -0.41
CD46-202ENST00000322918 TESK2Q96S53 571 aa12.47□□□□□ -0.41
CD46-202ENST00000322918 EFCAB6Q5THR3 1501 aa12.47□□□□□ -0.41
CD46-202ENST00000322918 RICTORQ6R327 1708 aa12.46□□□□□ -0.41
CD46-202ENST00000322918 PANK3Q9H999 370 aa12.46□□□□□ -0.41
CD46-202ENST00000322918 ABCC3O15438 1527 aa12.45□□□□□ -0.42
CD46-202ENST00000322918 BCANQ96GW7 911 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms