RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 RICTORQ6R327 1708 aa16.81■□□□□ 0.28
SEC24A-201ENST00000322887 ADGRL2O95490 1459 aa16.8■□□□□ 0.28
SEC24A-201ENST00000322887 MLH3Q9UHC1 1453 aa16.8■□□□□ 0.28
SEC24A-201ENST00000322887 FRMPD1Q5SYB0 1578 aa16.79■□□□□ 0.28
SEC24A-201ENST00000322887 MAGI2Q86UL8 1455 aa16.79■□□□□ 0.28
SEC24A-201ENST00000322887 TSPY4P0CV99 314 aa16.79■□□□□ 0.28
SEC24A-201ENST00000322887 TSPY10P0CW01 314 aa16.79■□□□□ 0.28
SEC24A-201ENST00000322887 C9orf84Q5VXU9 1444 aa16.78■□□□□ 0.28
SEC24A-201ENST00000322887 COL17A1Q9UMD9 1497 aaPredicted RBP16.78■□□□□ 0.28
SEC24A-201ENST00000322887 FANCIQ9NVI1 1328 aa16.78■□□□□ 0.28
SEC24A-201ENST00000322887 INO80Q9ULG1 1556 aaPredicted RBP16.78■□□□□ 0.28
SEC24A-201ENST00000322887 PAK3O75914 559 aaPredicted RBP16.77■□□□□ 0.28
SEC24A-201ENST00000322887 AFAP1Q8N556 730 aa16.76■□□□□ 0.27
SEC24A-201ENST00000322887 ZFYVE16Q7Z3T8 1539 aa16.76■□□□□ 0.27
SEC24A-201ENST00000322887 TIMELESSQ9UNS1 1208 aa16.76■□□□□ 0.27
SEC24A-201ENST00000322887 PLXNC1O60486 1568 aa16.76■□□□□ 0.27
SEC24A-201ENST00000322887 SPAG9O60271 1321 aaKnown RBP16.75■□□□□ 0.27
SEC24A-201ENST00000322887 HECW2Q9P2P5 1572 aa16.75■□□□□ 0.27
SEC24A-201ENST00000322887 ADGBQ8N7X0 1667 aa16.75■□□□□ 0.27
SEC24A-201ENST00000322887 NCOA1Q15788 1441 aa16.75■□□□□ 0.27
SEC24A-201ENST00000322887 ATP7AQ04656 1500 aa16.74■□□□□ 0.27
SEC24A-201ENST00000322887 ANKRD30AQ9BXX3 1397 aa16.74■□□□□ 0.27
SEC24A-201ENST00000322887 RAPGEF3O95398 923 aa16.74■□□□□ 0.27
SEC24A-201ENST00000322887 KDM6BO15054 1643 aa16.74■□□□□ 0.27
SEC24A-201ENST00000322887 MRS2Q9HD23 443 aa16.73■□□□□ 0.27
SEC24A-201ENST00000322887 DEKP35659 375 aaKnown RBP16.73■□□□□ 0.27
SEC24A-201ENST00000322887 HFM1A2PYH4 1435 aa16.72■□□□□ 0.27
SEC24A-201ENST00000322887 POLR3GLQ9BT43 218 aa16.72■□□□□ 0.27
SEC24A-201ENST00000322887 KIDINS220Q9ULH0 1771 aa16.71■□□□□ 0.27
SEC24A-201ENST00000322887 PPP4R2Q9NY27 417 aa16.71■□□□□ 0.27
SEC24A-201ENST00000322887 NAIPQ13075 1403 aa16.7■□□□□ 0.26
SEC24A-201ENST00000322887 L3MBTL2Q969R5 705 aa16.69■□□□□ 0.26
SEC24A-201ENST00000322887 REREQ9P2R6 1566 aa16.68■□□□□ 0.26
SEC24A-201ENST00000322887 DUOX2Q9NRD8 1548 aa16.68■□□□□ 0.26
SEC24A-201ENST00000322887 GCC2Q8IWJ2 1684 aa16.67■□□□□ 0.26
SEC24A-201ENST00000322887 PRKRIP1Q9H875 184 aaPredicted RBP16.67■□□□□ 0.26
SEC24A-201ENST00000322887 KIF15Q9NS87 1388 aa16.67■□□□□ 0.26
SEC24A-201ENST00000322887 ARHGEF40Q8TER5 1519 aa16.66■□□□□ 0.26
SEC24A-201ENST00000322887 DIP2CQ9Y2E4 1556 aa16.66■□□□□ 0.26
SEC24A-201ENST00000322887 ERBINQ96RT1 1412 aa16.66■□□□□ 0.26
SEC24A-201ENST00000322887 ABCA6Q8N139 1617 aa16.65■□□□□ 0.26
SEC24A-201ENST00000322887 EIF4G2P78344 907 aaKnown RBP eCLIP16.65■□□□□ 0.26
SEC24A-201ENST00000322887 NBPF8Q3BBV2 869 aa16.65■□□□□ 0.26
SEC24A-201ENST00000322887 ATP10AO60312 1499 aa16.64■□□□□ 0.25
SEC24A-201ENST00000322887 DHX29Q7Z478 1369 aaKnown RBP16.64■□□□□ 0.25
SEC24A-201ENST00000322887 YEATS2Q9ULM3 1422 aa16.63■□□□□ 0.25
SEC24A-201ENST00000322887 ANKRD50Q9ULJ7 1429 aa16.63■□□□□ 0.25
SEC24A-201ENST00000322887 A2MP01023 1474 aa16.63■□□□□ 0.25
SEC24A-201ENST00000322887 EIF2AK4Q9P2K8 1649 aaKnown RBP16.62■□□□□ 0.25
SEC24A-201ENST00000322887 BCORL1Q5H9F3 1711 aa16.62■□□□□ 0.25
SEC24A-201ENST00000322887 AGLP35573 1532 aa16.61■□□□□ 0.25
SEC24A-201ENST00000322887 CNTLNQ9NXG0 1405 aa16.6■□□□□ 0.25
SEC24A-201ENST00000322887 ZNF326Q5BKZ1 582 aaKnown RBP16.6■□□□□ 0.25
SEC24A-201ENST00000322887 MYT1LQ9UL68 1186 aa16.59■□□□□ 0.25
SEC24A-201ENST00000322887 NOP58Q9Y2X3 529 aaKnown RBP16.59■□□□□ 0.25
SEC24A-201ENST00000322887 CCDC7Q96M83 1385 aa16.58■□□□□ 0.24
SEC24A-201ENST00000322887 MPHOSPH9Q99550 1183 aa16.58■□□□□ 0.24
SEC24A-201ENST00000322887 KIF7Q2M1P5 1343 aa16.56■□□□□ 0.24
SEC24A-201ENST00000322887 SALL2Q9Y467 1007 aaPredicted RBP16.55■□□□□ 0.24
SEC24A-201ENST00000322887 DEPDC5O75140 1603 aa16.54■□□□□ 0.24
SEC24A-201ENST00000322887 RNF17Q9BXT8 1623 aaKnown RBP16.54■□□□□ 0.24
SEC24A-201ENST00000322887 ZBED9Q6R2W3 1325 aa16.54■□□□□ 0.24
SEC24A-201ENST00000322887 NPM2Q86SE8 214 aaKnown RBP16.54■□□□□ 0.24
SEC24A-201ENST00000322887 UNC13BO14795 1591 aa16.53■□□□□ 0.24
SEC24A-201ENST00000322887 FAM135AQ9P2D6 1515 aa16.53■□□□□ 0.24
SEC24A-201ENST00000322887 KDM5DQ9BY66 1539 aa16.52■□□□□ 0.24
SEC24A-201ENST00000322887 SKAP1Q86WV1 359 aa16.52■□□□□ 0.23
SEC24A-201ENST00000322887 RTN4Q9NQC3 1192 aaKnown RBP16.52■□□□□ 0.23
SEC24A-201ENST00000322887 PPP6R1Q9UPN7 881 aa16.52■□□□□ 0.23
SEC24A-201ENST00000322887 PRDM15P57071 1507 aaPredicted RBP16.51■□□□□ 0.23
SEC24A-201ENST00000322887 CCDC136Q96JN2 1154 aa16.51■□□□□ 0.23
SEC24A-201ENST00000322887 VWDEQ8N2E2 1590 aa16.49■□□□□ 0.23
SEC24A-201ENST00000322887 MROH1Q8NDA8 1641 aa16.49■□□□□ 0.23
SEC24A-201ENST00000322887 KIF3BO15066 747 aa16.48■□□□□ 0.23
SEC24A-201ENST00000322887 ANO8Q9HCE9 1232 aaPredicted RBP16.48■□□□□ 0.23
SEC24A-201ENST00000322887 SIGLEC1Q9BZZ2 1709 aa16.48■□□□□ 0.23
SEC24A-201ENST00000322887 LMTK2Q8IWU2 1503 aa16.46■□□□□ 0.23
SEC24A-201ENST00000322887 IQGAP3Q86VI3 1631 aa16.46■□□□□ 0.23
SEC24A-201ENST00000322887 IL27Q8NEV9 243 aa16.46■□□□□ 0.22
SEC24A-201ENST00000322887 LAS1LQ9Y4W2 734 aaKnown RBP16.45■□□□□ 0.22
SEC24A-201ENST00000322887 KANK1Q14678 1352 aa16.45■□□□□ 0.22
SEC24A-201ENST00000322887 ZC3H13Q5T200 1668 aaKnown RBP16.44■□□□□ 0.22
SEC24A-201ENST00000322887 NUP155O75694 1391 aa16.43■□□□□ 0.22
SEC24A-201ENST00000322887 ERICH6BQ5W0A0 696 aa16.43■□□□□ 0.22
SEC24A-201ENST00000322887 SLC4A1APQ9BWU0 796 aaKnown RBP16.43■□□□□ 0.22
SEC24A-201ENST00000322887 PZPP20742 1482 aa16.42■□□□□ 0.22
SEC24A-201ENST00000322887 NUDCQ9Y266 331 aa16.41■□□□□ 0.22
SEC24A-201ENST00000322887 IPO9Q96P70 1041 aaKnown RBP16.4■□□□□ 0.22
SEC24A-201ENST00000322887 ABCC3O15438 1527 aa16.4■□□□□ 0.22
SEC24A-201ENST00000322887 ANP32AP39687 249 aaKnown RBP16.39■□□□□ 0.21
SEC24A-201ENST00000322887 GGT6Q6P531 493 aa16.39■□□□□ 0.21
SEC24A-201ENST00000322887 ARID4BQ4LE39 1312 aaPredicted RBP16.39■□□□□ 0.21
SEC24A-201ENST00000322887 TET3O43151 1660 aa16.39■□□□□ 0.21
SEC24A-201ENST00000322887 EXOC6Q8TAG9 804 aa16.39■□□□□ 0.21
SEC24A-201ENST00000322887 ZBTB47Q9UFB7 747 aaPredicted RBP16.39■□□□□ 0.21
SEC24A-201ENST00000322887 ARHGAP31Q2M1Z3 1444 aa16.38■□□□□ 0.21
SEC24A-201ENST00000322887 ANKRD30BQ9BXX2 1392 aa16.37■□□□□ 0.21
SEC24A-201ENST00000322887 RPRD2Q5VT52 1461 aaKnown RBP16.37■□□□□ 0.21
SEC24A-201ENST00000322887 WASHC2CQ9Y4E1 1318 aa16.37■□□□□ 0.21
SEC24A-201ENST00000322887 SPATA31E1Q6ZUB1 1445 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms