RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 UHRF1BP1Q6BDS2 1440 aa23.62■■□□□ 1.37
PRKCB-202ENST00000321728 RAPGEF6Q8TEU7 1601 aa23.59■■□□□ 1.37
PRKCB-202ENST00000321728 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.59■■□□□ 1.37
PRKCB-202ENST00000321728 CRBNQ96SW2 442 aa23.58■■□□□ 1.37
PRKCB-202ENST00000321728 MRC2Q9UBG0 1479 aa23.58■■□□□ 1.37
PRKCB-202ENST00000321728 DCAF11Q8TEB1 546 aa23.57■■□□□ 1.36
PRKCB-202ENST00000321728 GSE1Q14687 1217 aa23.56■■□□□ 1.36
PRKCB-202ENST00000321728 DAXXQ9UER7 740 aaPredicted RBP23.56■■□□□ 1.36
PRKCB-202ENST00000321728 ADGBQ8N7X0 1667 aa23.55■■□□□ 1.36
PRKCB-202ENST00000321728 ANKRD30AQ9BXX3 1397 aa23.55■■□□□ 1.36
PRKCB-202ENST00000321728 KIAA0586Q9BVV6 1533 aa23.55■■□□□ 1.36
PRKCB-202ENST00000321728 BRPF3Q9ULD4 1205 aa23.55■■□□□ 1.36
PRKCB-202ENST00000321728 NUP155O75694 1391 aa23.54■■□□□ 1.36
PRKCB-202ENST00000321728 SLC4A3P48751 1232 aa23.54■■□□□ 1.36
PRKCB-202ENST00000321728 CHMP7Q8WUX9 453 aaPredicted RBP23.54■■□□□ 1.36
PRKCB-202ENST00000321728 NFKBIBQ15653 356 aa23.54■■□□□ 1.36
PRKCB-202ENST00000321728 ANKRD50Q9ULJ7 1429 aa23.53■■□□□ 1.36
PRKCB-202ENST00000321728 PARD3Q8TEW0 1356 aa23.53■■□□□ 1.36
PRKCB-202ENST00000321728 TROQ12816 1431 aaPredicted RBP23.52■■□□□ 1.36
PRKCB-202ENST00000321728 GPATCH8Q9UKJ3 1502 aaKnown RBP23.52■■□□□ 1.36
PRKCB-202ENST00000321728 ARHGEF12Q9NZN5 1544 aa23.51■■□□□ 1.35
PRKCB-202ENST00000321728 GRIN2AQ12879 1464 aa23.5■■□□□ 1.35
PRKCB-202ENST00000321728 E9PCH4 1651 aa23.5■■□□□ 1.35
PRKCB-202ENST00000321728 ADGRL2O95490 1459 aa23.5■■□□□ 1.35
PRKCB-202ENST00000321728 CC2D1BQ5T0F9 858 aaKnown RBP23.49■■□□□ 1.35
PRKCB-202ENST00000321728 HNRNPMP52272 730 aaKnown RBP eCLIP23.47■■□□□ 1.351e-6■■■■□ 23.1
PRKCB-202ENST00000321728 C20orf194Q5TEA3 1177 aa23.46■■□□□ 1.35
PRKCB-202ENST00000321728 FRAT1Q92837 279 aaPredicted RBP23.46■■□□□ 1.35
PRKCB-202ENST00000321728 RGL3Q3MIN7 710 aa23.45■■□□□ 1.34
PRKCB-202ENST00000321728 ITSN2Q9NZM3 1697 aa23.45■■□□□ 1.34
PRKCB-202ENST00000321728 PER1O15534 1290 aaPredicted RBP23.44■■□□□ 1.34
PRKCB-202ENST00000321728 IFT140Q96RY7 1462 aa23.44■■□□□ 1.34
PRKCB-202ENST00000321728 EIF4G3O43432 1585 aaKnown RBP23.43■■□□□ 1.34
PRKCB-202ENST00000321728 CROCC2H7BZ55 1655 aa23.42■■□□□ 1.34
PRKCB-202ENST00000321728 JPH4Q96JJ6 628 aa23.39■■□□□ 1.34
PRKCB-202ENST00000321728 BLMP54132 1417 aaPredicted RBP23.39■■□□□ 1.34
PRKCB-202ENST00000321728 KDM2BQ8NHM5 1336 aa23.39■■□□□ 1.34
PRKCB-202ENST00000321728 PLEKHD1A6NEE1 506 aa23.39■■□□□ 1.33
PRKCB-202ENST00000321728 CENPQQ7L2Z9 268 aaPredicted RBP23.39■■□□□ 1.33
PRKCB-202ENST00000321728 FAM161AQ3B820 660 aa23.38■■□□□ 1.33
PRKCB-202ENST00000321728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.38■■□□□ 1.332e-7■□□□□ 8.8
PRKCB-202ENST00000321728 CEP170Q5SW79 1584 aa23.38■■□□□ 1.33
PRKCB-202ENST00000321728 C9orf84Q5VXU9 1444 aa23.37■■□□□ 1.33
PRKCB-202ENST00000321728 TSPY4P0CV99 314 aa23.36■■□□□ 1.33
PRKCB-202ENST00000321728 TSPY10P0CW01 314 aa23.36■■□□□ 1.33
PRKCB-202ENST00000321728 NBPF1Q3BBV0 1214 aa23.36■■□□□ 1.33
PRKCB-202ENST00000321728 PANK3Q9H999 370 aa23.36■■□□□ 1.33
PRKCB-202ENST00000321728 C8orf34Q49A92 452 aa23.34■■□□□ 1.33
PRKCB-202ENST00000321728 PLEKHH2Q8IVE3 1493 aa23.33■■□□□ 1.32
PRKCB-202ENST00000321728 INSRP06213 1382 aa23.33■■□□□ 1.32
PRKCB-202ENST00000321728 FRAT2O75474 233 aaPredicted RBP23.33■■□□□ 1.32
PRKCB-202ENST00000321728 RGS3P49796 1198 aa23.32■■□□□ 1.32
PRKCB-202ENST00000321728 ZMYM4Q5VZL5 1548 aa23.32■■□□□ 1.32
PRKCB-202ENST00000321728 ADAMTS8Q9UP79 889 aa23.32■■□□□ 1.32
PRKCB-202ENST00000321728 EIF5BO60841 1220 aaKnown RBP23.31■■□□□ 1.32
PRKCB-202ENST00000321728 PRAG1Q86YV5 1406 aa23.31■■□□□ 1.32
PRKCB-202ENST00000321728 DISP3Q9P2K9 1392 aa23.3■■□□□ 1.32
PRKCB-202ENST00000321728 CDC42BPAQ5VT25 1732 aa23.29■■□□□ 1.32
PRKCB-202ENST00000321728 KDM5DQ9BY66 1539 aa23.28■■□□□ 1.32
PRKCB-202ENST00000321728 ERCC6Q03468 1493 aa23.28■■□□□ 1.32
PRKCB-202ENST00000321728 TRPM1Q7Z4N2 1603 aa23.27■■□□□ 1.32
PRKCB-202ENST00000321728 COL17A1Q9UMD9 1497 aaPredicted RBP23.27■■□□□ 1.32
PRKCB-202ENST00000321728 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.27■■□□□ 1.32
PRKCB-202ENST00000321728 CARMIL2Q6F5E8 1435 aa23.26■■□□□ 1.31
PRKCB-202ENST00000321728 ADCY10Q96PN6 1610 aa23.26■■□□□ 1.31
PRKCB-202ENST00000321728 CCDC144AA2RUR9 1427 aa23.26■■□□□ 1.31
PRKCB-202ENST00000321728 WDR43Q15061 677 aaKnown RBP eCLIP23.26■■□□□ 1.31
PRKCB-202ENST00000321728 DUSP27Q5VZP5 1158 aa23.26■■□□□ 1.31
PRKCB-202ENST00000321728 TESK2Q96S53 571 aa23.26■■□□□ 1.31
PRKCB-202ENST00000321728 SHANK2Q9UPX8 1470 aa23.25■■□□□ 1.31
PRKCB-202ENST00000321728 ATP10BO94823 1461 aa23.25■■□□□ 1.31
PRKCB-202ENST00000321728 MAGI1Q96QZ7 1491 aaPredicted RBP23.24■■□□□ 1.31
PRKCB-202ENST00000321728 PTPRGP23470 1445 aa23.23■■□□□ 1.31
PRKCB-202ENST00000321728 TMF1P82094 1093 aa23.23■■□□□ 1.31
PRKCB-202ENST00000321728 PLEKHH1Q9ULM0 1364 aa23.23■■□□□ 1.31
PRKCB-202ENST00000321728 GOLGA2Q08379 1002 aa23.22■■□□□ 1.31
PRKCB-202ENST00000321728 ERBINQ96RT1 1412 aa23.22■■□□□ 1.31
PRKCB-202ENST00000321728 SYNJ2O15056 1496 aa23.22■■□□□ 1.31
PRKCB-202ENST00000321728 ABCC10Q5T3U5 1492 aa23.2■■□□□ 1.31
PRKCB-202ENST00000321728 GPRASP1Q5JY77 1395 aa23.19■■□□□ 1.3
PRKCB-202ENST00000321728 FAM135AQ9P2D6 1515 aa23.18■■□□□ 1.3
PRKCB-202ENST00000321728 PPP2R1AP30153 589 aa23.16■■□□□ 1.3
PRKCB-202ENST00000321728 KNSTRNQ9Y448 316 aa23.16■■□□□ 1.3
PRKCB-202ENST00000321728 UBE2Q2Q8WVN8 375 aa23.16■■□□□ 1.3
PRKCB-202ENST00000321728 FAM43AQ8N2R8 423 aa23.15■■□□□ 1.3
PRKCB-202ENST00000321728 A2MP01023 1474 aa23.14■■□□□ 1.3
PRKCB-202ENST00000321728 PRDM15P57071 1507 aaPredicted RBP23.14■■□□□ 1.3
PRKCB-202ENST00000321728 ZNF521Q96K83 1311 aa23.13■■□□□ 1.29
PRKCB-202ENST00000321728 ABCA8O94911 1581 aa23.13■■□□□ 1.29
PRKCB-202ENST00000321728 SLFN5Q08AF3 891 aa23.12■■□□□ 1.29
PRKCB-202ENST00000321728 CCDC146Q8IYE0 955 aa23.1■■□□□ 1.29
PRKCB-202ENST00000321728 RSPH6AQ9H0K4 717 aa23.1■■□□□ 1.29
PRKCB-202ENST00000321728 NUP160Q12769 1436 aa23.08■■□□□ 1.29
PRKCB-202ENST00000321728 BCAR3O75815 825 aa23.08■■□□□ 1.29
PRKCB-202ENST00000321728 POGKQ9P215 609 aa23.08■■□□□ 1.29
PRKCB-202ENST00000321728 LAMC1P11047 1609 aa23.08■■□□□ 1.28
PRKCB-202ENST00000321728 SAMD9LQ8IVG5 1584 aa23.07■■□□□ 1.28
PRKCB-202ENST00000321728 PLA2R1Q13018 1463 aa23.07■■□□□ 1.28
PRKCB-202ENST00000321728 EIF3AQ14152 1382 aaKnown RBP23.07■■□□□ 1.28
PRKCB-202ENST00000321728 MAGI2Q86UL8 1455 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms