RNA–Protein interactions for RNA: ENST00000321046.9

NR1H4-202, Transcript of nuclear receptor subfamily 1 group H member 4, humanhuman

TSL 1 (best)

Gene NR1H4, Length 1,779 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4-202ENST00000321046 NAIPQ13075 1403 aa20.23■□□□□ 0.83
NR1H4-202ENST00000321046 PTPRMP28827 1452 aa20.23■□□□□ 0.83
NR1H4-202ENST00000321046 CLTCQ00610 1675 aaKnown RBP20.23■□□□□ 0.83
NR1H4-202ENST00000321046 DEPDC5O75140 1603 aa20.22■□□□□ 0.83
NR1H4-202ENST00000321046 GCC2Q8IWJ2 1684 aa20.21■□□□□ 0.83
NR1H4-202ENST00000321046 PLPPR3Q6T4P5 718 aa20.21■□□□□ 0.83
NR1H4-202ENST00000321046 HFM1A2PYH4 1435 aa20.21■□□□□ 0.83
NR1H4-202ENST00000321046 PRDM15P57071 1507 aaPredicted RBP20.21■□□□□ 0.83
NR1H4-202ENST00000321046 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.19■□□□□ 0.824e-7■■■■□ 19.4
NR1H4-202ENST00000321046 KDM5DQ9BY66 1539 aa20.19■□□□□ 0.82
NR1H4-202ENST00000321046 CEBPAP49715 358 aaPredicted RBP20.18■□□□□ 0.82
NR1H4-202ENST00000321046 ESF1Q9H501 851 aaKnown RBP20.18■□□□□ 0.82
NR1H4-202ENST00000321046 ABCC3O15438 1527 aa20.17■□□□□ 0.82
NR1H4-202ENST00000321046 CEP152O94986 1710 aa20.16■□□□□ 0.82
NR1H4-202ENST00000321046 WASHC2CQ9Y4E1 1318 aa20.16■□□□□ 0.82
NR1H4-202ENST00000321046 C3P01024 1663 aa20.16■□□□□ 0.82
NR1H4-202ENST00000321046 CNTLNQ9NXG0 1405 aa20.16■□□□□ 0.82
NR1H4-202ENST00000321046 UNC13BO14795 1591 aa20.15■□□□□ 0.82
NR1H4-202ENST00000321046 MROH2AA6NES4 1674 aa20.14■□□□□ 0.81
NR1H4-202ENST00000321046 VWDEQ8N2E2 1590 aa20.13■□□□□ 0.81
NR1H4-202ENST00000321046 ZMYM3Q14202 1370 aa20.13■□□□□ 0.81
NR1H4-202ENST00000321046 PPP6R1Q9UPN7 881 aa20.13■□□□□ 0.81
NR1H4-202ENST00000321046 ZC3H13Q5T200 1668 aaKnown RBP20.13■□□□□ 0.81
NR1H4-202ENST00000321046 FAM135AQ9P2D6 1515 aa20.12■□□□□ 0.81
NR1H4-202ENST00000321046 CAMSAP1Q5T5Y3 1602 aa20.1■□□□□ 0.81
NR1H4-202ENST00000321046 AEBP2Q6ZN18 517 aaPredicted RBP20.1■□□□□ 0.81
NR1H4-202ENST00000321046 KANK1Q14678 1352 aa20.09■□□□□ 0.81
NR1H4-202ENST00000321046 NUP155O75694 1391 aa20.08■□□□□ 0.8
NR1H4-202ENST00000321046 SETD5Q9C0A6 1442 aa20.07■□□□□ 0.8
NR1H4-202ENST00000321046 LMTK2Q8IWU2 1503 aa20.06■□□□□ 0.8
NR1H4-202ENST00000321046 IQGAP3Q86VI3 1631 aa20.06■□□□□ 0.8
NR1H4-202ENST00000321046 FBXO31Q5XUX0 539 aaPredicted RBP20.06■□□□□ 0.8
NR1H4-202ENST00000321046 PZPP20742 1482 aa20.06■□□□□ 0.8
NR1H4-202ENST00000321046 EFCAB6Q5THR3 1501 aa20.05■□□□□ 0.8
NR1H4-202ENST00000321046 RAB3GAP2Q9H2M9 1393 aa20.04■□□□□ 0.8
NR1H4-202ENST00000321046 TRIM26Q12899 539 aaPredicted RBP20.04■□□□□ 0.8
NR1H4-202ENST00000321046 NPATQ14207 1427 aa20.04■□□□□ 0.8
NR1H4-202ENST00000321046 TET3O43151 1660 aa20.02■□□□□ 0.8
NR1H4-202ENST00000321046 CFAP65Q6ZU64 1925 aaKnown RBP20.02■□□□□ 0.79
NR1H4-202ENST00000321046 TRIM52Q96A61 297 aa20.01■□□□□ 0.79
NR1H4-202ENST00000321046 ARHGAP31Q2M1Z3 1444 aa20■□□□□ 0.79
NR1H4-202ENST00000321046 ERVK-7P63135 1459 aa19.99■□□□□ 0.79
NR1H4-202ENST00000321046 E9PCH4 1651 aa19.99■□□□□ 0.79
NR1H4-202ENST00000321046 PREX1Q8TCU6 1659 aa19.98■□□□□ 0.79
NR1H4-202ENST00000321046 SPATA31D1Q6ZQQ2 1576 aa19.97■□□□□ 0.79
NR1H4-202ENST00000321046 MYO3AQ8NEV4 1616 aa19.97■□□□□ 0.79
NR1H4-202ENST00000321046 LMTK3Q96Q04 1460 aa19.96■□□□□ 0.79
NR1H4-202ENST00000321046 TNRQ92752 1358 aa19.96■□□□□ 0.79
NR1H4-202ENST00000321046 RPRD2Q5VT52 1461 aaKnown RBP19.93■□□□□ 0.78
NR1H4-202ENST00000321046 SETD1BQ9UPS6 1966 aaKnown RBP19.93■□□□□ 0.78
NR1H4-202ENST00000321046 SYNMO15061 1565 aa19.93■□□□□ 0.78
NR1H4-202ENST00000321046 UHRF1BP1Q6BDS2 1440 aa19.92■□□□□ 0.78
NR1H4-202ENST00000321046 SLC4A1APQ9BWU0 796 aaKnown RBP19.92■□□□□ 0.78
NR1H4-202ENST00000321046 NOS1P29475 1434 aa19.91■□□□□ 0.78
NR1H4-202ENST00000321046 PKD2Q13563 968 aa19.9■□□□□ 0.78
NR1H4-202ENST00000321046 FOXD1Q16676 465 aa19.9■□□□□ 0.78
NR1H4-202ENST00000321046 UGGT1Q9NYU2 1555 aa19.89■□□□□ 0.78
NR1H4-202ENST00000321046 CEP170BQ9Y4F5 1589 aaPredicted RBP19.89■□□□□ 0.78
NR1H4-202ENST00000321046 HSPA2P54652 639 aa19.89■□□□□ 0.77
NR1H4-202ENST00000321046 MPHOSPH9Q99550 1183 aa19.88■□□□□ 0.77
NR1H4-202ENST00000321046 ZNF142P52746 1687 aaPredicted RBP19.88■□□□□ 0.77
NR1H4-202ENST00000321046 PCGF6Q9BYE7 350 aa19.86■□□□□ 0.77
NR1H4-202ENST00000321046 NLRP1Q9C000 1473 aa19.86■□□□□ 0.77
NR1H4-202ENST00000321046 SPHKAPQ2M3C7 1700 aa19.86■□□□□ 0.77
NR1H4-202ENST00000321046 A2ML1A8K2U0 1454 aa19.85■□□□□ 0.77
NR1H4-202ENST00000321046 PLA2R1Q13018 1463 aa19.84■□□□□ 0.77
NR1H4-202ENST00000321046 HRCP23327 699 aa19.84■□□□□ 0.77
NR1H4-202ENST00000321046 PIK3C2BO00750 1634 aa19.84■□□□□ 0.77
NR1H4-202ENST00000321046 PTPRTO14522 1441 aa19.83■□□□□ 0.77
NR1H4-202ENST00000321046 IDI1Q13907 227 aa19.83■□□□□ 0.76
NR1H4-202ENST00000321046 TRPM2O94759 1503 aa19.81■□□□□ 0.76
NR1H4-202ENST00000321046 UBR1Q8IWV7 1749 aa19.8■□□□□ 0.76
NR1H4-202ENST00000321046 ACIN1Q9UKV3 1341 aaKnown RBP19.79■□□□□ 0.76
NR1H4-202ENST00000321046 CLTCL1P53675 1640 aa19.79■□□□□ 0.76
NR1H4-202ENST00000321046 SLC52A1Q9NWF4 448 aa19.77■□□□□ 0.76
NR1H4-202ENST00000321046 ADGRB3O60242 1522 aa19.76■□□□□ 0.75
NR1H4-202ENST00000321046 MYO5BQ9ULV0 1848 aa19.75■□□□□ 0.75
NR1H4-202ENST00000321046 TMEM131LA2VDJ0 1609 aa19.74■□□□□ 0.75
NR1H4-202ENST00000321046 STRCQ7RTU9 1775 aa19.74■□□□□ 0.75
NR1H4-202ENST00000321046 CHGAP10645 457 aaKnown RBP19.72■□□□□ 0.75
NR1H4-202ENST00000321046 STAG3Q9UJ98 1225 aa19.72■□□□□ 0.75
NR1H4-202ENST00000321046 KDM5AP29375 1690 aaKnown RBP19.72■□□□□ 0.75
NR1H4-202ENST00000321046 THEMISQ8N1K5 641 aaPredicted RBP19.71■□□□□ 0.75
NR1H4-202ENST00000321046 NCKAP5LQ9HCH0 1330 aa19.7■□□□□ 0.74
NR1H4-202ENST00000321046 CCDC144AA2RUR9 1427 aa19.7■□□□□ 0.74
NR1H4-202ENST00000321046 ANKRD30BQ9BXX2 1392 aa19.7■□□□□ 0.74
NR1H4-202ENST00000321046 DHX57Q6P158 1386 aaKnown RBP19.69■□□□□ 0.74
NR1H4-202ENST00000321046 TMEM2Q9UHN6 1383 aa19.68■□□□□ 0.74
NR1H4-202ENST00000321046 SLIT1O75093 1534 aa19.68■□□□□ 0.74
NR1H4-202ENST00000321046 ARHGAP23Q9P227 1491 aa19.68■□□□□ 0.74
NR1H4-202ENST00000321046 NEURL4Q96JN8 1562 aa19.67■□□□□ 0.74
NR1H4-202ENST00000321046 POLR1AO95602 1720 aaPredicted RBP19.66■□□□□ 0.74
NR1H4-202ENST00000321046 KIF1BO60333 1816 aa19.66■□□□□ 0.74
NR1H4-202ENST00000321046 LTKP29376 864 aa19.65■□□□□ 0.74
NR1H4-202ENST00000321046 ZFYVE9O95405 1425 aa19.64■□□□□ 0.73
NR1H4-202ENST00000321046 NUTM2DQ5VT03 806 aaPredicted RBP19.64■□□□□ 0.73
NR1H4-202ENST00000321046 SCAF11Q99590 1463 aaKnown RBP19.63■□□□□ 0.73
NR1H4-202ENST00000321046 RIMS2Q9UQ26 1411 aa19.63■□□□□ 0.73
NR1H4-202ENST00000321046 ANKLE2Q86XL3 938 aa19.62■□□□□ 0.73
NR1H4-202ENST00000321046 SENP3Q9H4L4 574 aaPredicted RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms