RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.96□□□□□ -0.02
FARP1-201ENST00000319562 RUFY1Q96T51 708 aa14.96□□□□□ -0.02
FARP1-201ENST00000319562 EIF3AQ14152 1382 aaKnown RBP14.95□□□□□ -0.02
FARP1-201ENST00000319562 ZNF592Q92610 1267 aa14.95□□□□□ -0.02
FARP1-201ENST00000319562 NOL8Q76FK4 1167 aaKnown RBP14.95□□□□□ -0.02
FARP1-201ENST00000319562 AKAP17AQ02040 695 aaKnown RBP14.95□□□□□ -0.02
FARP1-201ENST00000319562 PDE3BQ13370 1112 aa14.94□□□□□ -0.02
FARP1-201ENST00000319562 TSHZ2Q9NRE2 1034 aa14.94□□□□□ -0.02
FARP1-201ENST00000319562 LMOD3Q0VAK6 560 aa14.94□□□□□ -0.02
FARP1-201ENST00000319562 ARGLU1Q9NWB6 273 aaPredicted RBP14.94□□□□□ -0.02
FARP1-201ENST00000319562 ROCK2O75116 1388 aaKnown RBP14.93□□□□□ -0.02
FARP1-201ENST00000319562 CENPJQ9HC77 1338 aaPredicted RBP14.93□□□□□ -0.02
FARP1-201ENST00000319562 ZNF330Q9Y3S2 320 aaPredicted RBP14.93□□□□□ -0.02
FARP1-201ENST00000319562 MTERF4Q7Z6M4 381 aaKnown RBP14.93□□□□□ -0.02
FARP1-201ENST00000319562 G3V3G9 751 aa14.92□□□□□ -0.02
FARP1-201ENST00000319562 DCAF8Q5TAQ9 597 aa14.92□□□□□ -0.02
FARP1-201ENST00000319562 HOMER1Q86YM7 354 aa14.92□□□□□ -0.02
FARP1-201ENST00000319562 HSPA5P11021 654 aaKnown RBP14.92□□□□□ -0.02
FARP1-201ENST00000319562 LRRFIP1Q32MZ4 808 aaKnown RBP14.92□□□□□ -0.02
FARP1-201ENST00000319562 CENPQQ7L2Z9 268 aaPredicted RBP14.91□□□□□ -0.02
FARP1-201ENST00000319562 CCDC47Q96A33 483 aaKnown RBP14.91□□□□□ -0.02
FARP1-201ENST00000319562 CWC15Q9P013 229 aaKnown RBP14.91□□□□□ -0.02
FARP1-201ENST00000319562 SETD5Q9C0A6 1442 aa14.91□□□□□ -0.02
FARP1-201ENST00000319562 FOXD4L5Q5VV16 416 aaPredicted RBP14.91□□□□□ -0.02
FARP1-201ENST00000319562 FOXD4L4Q8WXT5 416 aaPredicted RBP14.91□□□□□ -0.02
FARP1-201ENST00000319562 TOMM22Q9NS69 142 aa14.91□□□□□ -0.02
FARP1-201ENST00000319562 FAM161AQ3B820 660 aa14.9□□□□□ -0.02
FARP1-201ENST00000319562 PCMTD1Q96MG8 357 aaPredicted RBP14.9□□□□□ -0.02
FARP1-201ENST00000319562 FAM13BQ9NYF5 915 aa14.9□□□□□ -0.02
FARP1-201ENST00000319562 HSP90B2PQ58FF3 399 aa14.9□□□□□ -0.02
FARP1-201ENST00000319562 CCDC191Q8NCU4 936 aa14.9□□□□□ -0.02
FARP1-201ENST00000319562 SLC4A10Q6U841 1118 aa14.9□□□□□ -0.02
FARP1-201ENST00000319562 MAP7D2Q96T17 732 aa14.9□□□□□ -0.02
FARP1-201ENST00000319562 DCTN1Q14203 1278 aa14.89□□□□□ -0.03
FARP1-201ENST00000319562 CPLX2Q6PUV4 134 aaKnown RBP14.89□□□□□ -0.03
FARP1-201ENST00000319562 SYNE3Q6ZMZ3 975 aa14.89□□□□□ -0.03
FARP1-201ENST00000319562 SAFB2Q14151 953 aaKnown RBP eCLIP14.88□□□□□ -0.03
FARP1-201ENST00000319562 PAK3O75914 559 aaPredicted RBP14.88□□□□□ -0.03
FARP1-201ENST00000319562 MYO15BQ96JP2 1530 aa14.88□□□□□ -0.03
FARP1-201ENST00000319562 FRAT2O75474 233 aaPredicted RBP14.87□□□□□ -0.03
FARP1-201ENST00000319562 CSB-PGBD3P0DP91 1061 aa14.87□□□□□ -0.03
FARP1-201ENST00000319562 TRIM29Q14134 588 aa14.87□□□□□ -0.03
FARP1-201ENST00000319562 ARHGAP35Q9NRY4 1499 aa14.87□□□□□ -0.03
FARP1-201ENST00000319562 TCEAL9Q9UHQ7 104 aa14.87□□□□□ -0.03
FARP1-201ENST00000319562 RDXP35241 583 aaKnown RBP14.86□□□□□ -0.03
FARP1-201ENST00000319562 FAM43AQ8N2R8 423 aa14.86□□□□□ -0.03
FARP1-201ENST00000319562 MCTP1Q6DN14 999 aa14.86□□□□□ -0.03
FARP1-201ENST00000319562 WRNQ14191 1432 aaPredicted RBP eCLIP14.86□□□□□ -0.03
FARP1-201ENST00000319562 APPP05067 770 aa14.85□□□□□ -0.03
FARP1-201ENST00000319562 DIAPH3Q9NSV4 1193 aa14.85□□□□□ -0.03
FARP1-201ENST00000319562 REC8O95072 547 aa14.85□□□□□ -0.03
FARP1-201ENST00000319562 RILPL2Q969X0 211 aa14.84□□□□□ -0.03
FARP1-201ENST00000319562 RUFY2Q8WXA3 655 aa14.84□□□□□ -0.03
FARP1-201ENST00000319562 TERF2IPQ9NYB0 399 aa14.84□□□□□ -0.03
FARP1-201ENST00000319562 STK26Q9P289 416 aa14.84□□□□□ -0.03
FARP1-201ENST00000319562 CCDC66A2RUB6 948 aa14.84□□□□□ -0.03
FARP1-201ENST00000319562 MNS1Q8NEH6 495 aa14.84□□□□□ -0.03
FARP1-201ENST00000319562 ERCC4Q92889 916 aaPredicted RBP14.82□□□□□ -0.04
FARP1-201ENST00000319562 MYO6Q9UM54 1294 aa14.82□□□□□ -0.04
FARP1-201ENST00000319562 NLRP13Q86W25 1043 aa14.82□□□□□ -0.04
FARP1-201ENST00000319562 H0YHG0 523 aa14.82□□□□□ -0.04
FARP1-201ENST00000319562 AMOTL1Q8IY63 956 aa14.82□□□□□ -0.04
FARP1-201ENST00000319562 CLUAP1Q96AJ1 413 aa14.82□□□□□ -0.04
FARP1-201ENST00000319562 SASS6Q6UVJ0 657 aa14.82□□□□□ -0.04
FARP1-201ENST00000319562 ANO8Q9HCE9 1232 aaPredicted RBP14.82□□□□□ -0.04
FARP1-201ENST00000319562 ZKSCAN1P17029 563 aaPredicted RBP14.82□□□□□ -0.04
FARP1-201ENST00000319562 CCDC173Q0VFZ6 552 aa14.82□□□□□ -0.04
FARP1-201ENST00000319562 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.82□□□□□ -0.04
FARP1-201ENST00000319562 PDE4AP27815 886 aa14.81□□□□□ -0.04
FARP1-201ENST00000319562 ANKRD45Q5TZF3 282 aa14.81□□□□□ -0.04
FARP1-201ENST00000319562 FOXD4L6Q3SYB3 417 aaPredicted RBP14.8□□□□□ -0.04
FARP1-201ENST00000319562 FOXD4L3Q6VB84 417 aaPredicted RBP14.8□□□□□ -0.04
FARP1-201ENST00000319562 FBXO3Q9UK99 471 aa14.8□□□□□ -0.04
FARP1-201ENST00000319562 WWC1Q8IX03 1113 aa14.8□□□□□ -0.04
FARP1-201ENST00000319562 ODF2Q5BJF6 829 aa14.8□□□□□ -0.04
FARP1-201ENST00000319562 NAT10Q9H0A0 1025 aaKnown RBP14.8□□□□□ -0.04
FARP1-201ENST00000319562 IFT57Q9NWB7 429 aa14.8□□□□□ -0.04
FARP1-201ENST00000319562 KRI1Q8N9T8 703 aaKnown RBP14.79□□□□□ -0.04
FARP1-201ENST00000319562 BICD2Q8TD16 824 aa14.79□□□□□ -0.04
FARP1-201ENST00000319562 NAP1L1P55209 391 aaKnown RBP14.78□□□□□ -0.04
FARP1-201ENST00000319562 CT47A1Q5JQC4 288 aaPredicted RBP14.78□□□□□ -0.04
FARP1-201ENST00000319562 NUCB2P80303 420 aa14.78□□□□□ -0.04
FARP1-201ENST00000319562 CHMP5Q9NZZ3 219 aa14.78□□□□□ -0.04
FARP1-201ENST00000319562 GTF2E1P29083 439 aaPredicted RBP14.78□□□□□ -0.04
FARP1-201ENST00000319562 RNF20Q5VTR2 975 aa14.78□□□□□ -0.04
FARP1-201ENST00000319562 KIF15Q9NS87 1388 aa14.77□□□□□ -0.04
FARP1-201ENST00000319562 CGNL1Q0VF96 1302 aa14.77□□□□□ -0.04
FARP1-201ENST00000319562 CPLX1O14810 134 aa14.77□□□□□ -0.04
FARP1-201ENST00000319562 PKD2Q13563 968 aa14.77□□□□□ -0.04
FARP1-201ENST00000319562 NOL10Q9BSC4 688 aaKnown RBP14.77□□□□□ -0.04
FARP1-201ENST00000319562 EIF4G1Q04637 1599 aaKnown RBP14.77□□□□□ -0.05
FARP1-201ENST00000319562 FANCIQ9NVI1 1328 aa14.76□□□□□ -0.05
FARP1-201ENST00000319562 CCDC39Q9UFE4 941 aa14.76□□□□□ -0.05
FARP1-201ENST00000319562 CCDC146Q8IYE0 955 aa14.75□□□□□ -0.05
FARP1-201ENST00000319562 ZRSR2Q15696 482 aaKnown RBP14.75□□□□□ -0.05
FARP1-201ENST00000319562 TRIM34Q9BYJ4 488 aa14.75□□□□□ -0.05
FARP1-201ENST00000319562 TRDNQ13061 729 aa14.75□□□□□ -0.05
FARP1-201ENST00000319562 ROCK1Q13464 1354 aa14.74□□□□□ -0.05
FARP1-201ENST00000319562 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.74□□□□□ -0.05
FARP1-201ENST00000319562 ZKSCAN2Q63HK3 967 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms