RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 ADAMTS8Q9UP79 889 aa18.54■□□□□ 0.56
PABPC1-201ENST00000318607 NLRP13Q86W25 1043 aa18.53■□□□□ 0.56
PABPC1-201ENST00000318607 BCL2L13Q9BXK5 485 aa18.52■□□□□ 0.56
PABPC1-201ENST00000318607 KDM6BO15054 1643 aa18.52■□□□□ 0.56
PABPC1-201ENST00000318607 DHX29Q7Z478 1369 aaKnown RBP18.52■□□□□ 0.56
PABPC1-201ENST00000318607 ROCK2O75116 1388 aaKnown RBP18.51■□□□□ 0.55
PABPC1-201ENST00000318607 HNRNPMP52272 730 aaKnown RBP eCLIP18.51■□□□□ 0.55
PABPC1-201ENST00000318607 CDK13Q14004 1512 aaKnown RBP18.5■□□□□ 0.55
PABPC1-201ENST00000318607 CLUAP1Q96AJ1 413 aa18.5■□□□□ 0.55
PABPC1-201ENST00000318607 TSPY4P0CV99 314 aa18.5■□□□□ 0.55
PABPC1-201ENST00000318607 TSPY10P0CW01 314 aa18.5■□□□□ 0.55
PABPC1-201ENST00000318607 POGKQ9P215 609 aa18.5■□□□□ 0.55
PABPC1-201ENST00000318607 BCORL1Q5H9F3 1711 aa18.5■□□□□ 0.55
PABPC1-201ENST00000318607 SNAPC4Q5SXM2 1469 aa18.48■□□□□ 0.55
PABPC1-201ENST00000318607 KIAA0586Q9BVV6 1533 aa18.48■□□□□ 0.55
PABPC1-201ENST00000318607 KTN1Q86UP2 1357 aaKnown RBP18.48■□□□□ 0.55
PABPC1-201ENST00000318607 KIF15Q9NS87 1388 aa18.48■□□□□ 0.55
PABPC1-201ENST00000318607 BCAR3O75815 825 aa18.47■□□□□ 0.55
PABPC1-201ENST00000318607 PKNOX2Q96KN3 472 aa18.47■□□□□ 0.55
PABPC1-201ENST00000318607 USP35Q9P2H5 1018 aa18.47■□□□□ 0.55
PABPC1-201ENST00000318607 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.47■□□□□ 0.559e-8■□□□□ 8.7
PABPC1-201ENST00000318607 RALBP1Q15311 655 aa18.47■□□□□ 0.55
PABPC1-201ENST00000318607 RRP7AQ9Y3A4 280 aaKnown RBP18.47■□□□□ 0.55
PABPC1-201ENST00000318607 NAP1L5Q96NT1 182 aaPredicted RBP18.46■□□□□ 0.55
PABPC1-201ENST00000318607 DENND4BO75064 1496 aaPredicted RBP18.46■□□□□ 0.55
PABPC1-201ENST00000318607 DISP1Q96F81 1524 aa18.45■□□□□ 0.54
PABPC1-201ENST00000318607 CHMP7Q8WUX9 453 aaPredicted RBP18.44■□□□□ 0.54
PABPC1-201ENST00000318607 ARAP3Q8WWN8 1544 aa18.44■□□□□ 0.54
PABPC1-201ENST00000318607 COG6Q9Y2V7 657 aa18.44■□□□□ 0.54
PABPC1-201ENST00000318607 ZNF608Q9ULD9 1512 aaPredicted RBP18.43■□□□□ 0.54
PABPC1-201ENST00000318607 KNSTRNQ9Y448 316 aa18.43■□□□□ 0.54
PABPC1-201ENST00000318607 RNF123Q5XPI4 1314 aa18.42■□□□□ 0.54
PABPC1-201ENST00000318607 FAM161AQ3B820 660 aa18.42■□□□□ 0.54
PABPC1-201ENST00000318607 APAF1O14727 1248 aa18.42■□□□□ 0.54
PABPC1-201ENST00000318607 MS4A1P11836 297 aa18.42■□□□□ 0.54
PABPC1-201ENST00000318607 UBE2Q2Q8WVN8 375 aa18.42■□□□□ 0.54
PABPC1-201ENST00000318607 PANK1Q8TE04 598 aa18.41■□□□□ 0.54
PABPC1-201ENST00000318607 SEC24BO95487 1268 aa18.4■□□□□ 0.54
PABPC1-201ENST00000318607 RPRD2Q5VT52 1461 aaKnown RBP18.37■□□□□ 0.53
PABPC1-201ENST00000318607 ARID3AQ99856 593 aa18.37■□□□□ 0.53
PABPC1-201ENST00000318607 FOXD4L1Q9NU39 408 aa18.36■□□□□ 0.53
PABPC1-201ENST00000318607 GOLGA2Q08379 1002 aa18.36■□□□□ 0.53
PABPC1-201ENST00000318607 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.36■□□□□ 0.53
PABPC1-201ENST00000318607 MAGI3Q5TCQ9 1506 aa18.35■□□□□ 0.53
PABPC1-201ENST00000318607 CROCC2H7BZ55 1655 aa18.34■□□□□ 0.53
PABPC1-201ENST00000318607 SPATA31E1Q6ZUB1 1445 aa18.34■□□□□ 0.53
PABPC1-201ENST00000318607 ZBTB7CA1YPR0 619 aa18.34■□□□□ 0.53
PABPC1-201ENST00000318607 SPINK5Q9NQ38 1064 aaPredicted RBP18.33■□□□□ 0.53
PABPC1-201ENST00000318607 BRD4O60885 1362 aaPredicted RBP18.33■□□□□ 0.53
PABPC1-201ENST00000318607 CENPQQ7L2Z9 268 aaPredicted RBP18.33■□□□□ 0.52
PABPC1-201ENST00000318607 ABCC5O15440 1437 aa18.33■□□□□ 0.52
PABPC1-201ENST00000318607 SUPT6HQ7KZ85 1726 aaKnown RBP18.33■□□□□ 0.52
PABPC1-201ENST00000318607 C8orf34Q49A92 452 aa18.33■□□□□ 0.52
PABPC1-201ENST00000318607 PRG4Q92954 1404 aaPredicted RBP18.32■□□□□ 0.52
PABPC1-201ENST00000318607 PDE3BQ13370 1112 aa18.32■□□□□ 0.52
PABPC1-201ENST00000318607 GLI2P10070 1586 aa18.32■□□□□ 0.52
PABPC1-201ENST00000318607 PLEKHD1A6NEE1 506 aa18.32■□□□□ 0.52
PABPC1-201ENST00000318607 IGHDP01880 384 aa18.32■□□□□ 0.52
PABPC1-201ENST00000318607 CHGAP10645 457 aaKnown RBP18.32■□□□□ 0.52
PABPC1-201ENST00000318607 EHBP1L1Q8N3D4 1523 aa18.32■□□□□ 0.52
PABPC1-201ENST00000318607 DAPK1P53355 1430 aa18.32■□□□□ 0.52
PABPC1-201ENST00000318607 WASHC2CQ9Y4E1 1318 aa18.31■□□□□ 0.52
PABPC1-201ENST00000318607 TMF1P82094 1093 aa18.3■□□□□ 0.52
PABPC1-201ENST00000318607 EPRSP07814 1512 aaKnown RBP18.3■□□□□ 0.52
PABPC1-201ENST00000318607 RAPGEF6Q8TEU7 1601 aa18.29■□□□□ 0.52
PABPC1-201ENST00000318607 TNNQ9UQP3 1299 aa18.29■□□□□ 0.52
PABPC1-201ENST00000318607 HECW1Q76N89 1606 aa18.29■□□□□ 0.52
PABPC1-201ENST00000318607 MFAP1P55081 439 aaKnown RBP18.29■□□□□ 0.52
PABPC1-201ENST00000318607 A0A0U1RQG5 324 aaPredicted RBP18.28■□□□□ 0.52
PABPC1-201ENST00000318607 VSIG10Q8N0Z9 540 aa18.28■□□□□ 0.52
PABPC1-201ENST00000318607 UPF2Q9HAU5 1272 aaKnown RBP18.28■□□□□ 0.52
PABPC1-201ENST00000318607 PANK2Q9BZ23 570 aa18.28■□□□□ 0.52
PABPC1-201ENST00000318607 DMRT2Q9Y5R5 561 aa18.27■□□□□ 0.52
PABPC1-201ENST00000318607 TEX14Q8IWB6 1497 aa18.27■□□□□ 0.52
PABPC1-201ENST00000318607 BECN1Q14457 450 aa18.26■□□□□ 0.51
PABPC1-201ENST00000318607 ERCC6Q03468 1493 aa18.26■□□□□ 0.51
PABPC1-201ENST00000318607 DUSP27Q5VZP5 1158 aa18.25■□□□□ 0.51
PABPC1-201ENST00000318607 TPRNQ4KMQ1 711 aa18.24■□□□□ 0.51
PABPC1-201ENST00000318607 RRAGDQ9NQL2 400 aaPredicted RBP18.24■□□□□ 0.51
PABPC1-201ENST00000318607 HSP90AA1P07900 732 aaKnown RBP18.24■□□□□ 0.51
PABPC1-201ENST00000318607 ANKRD30AQ9BXX3 1397 aa18.23■□□□□ 0.51
PABPC1-201ENST00000318607 ANKRD50Q9ULJ7 1429 aa18.23■□□□□ 0.51
PABPC1-201ENST00000318607 PPP2R1AP30153 589 aa18.23■□□□□ 0.51
PABPC1-201ENST00000318607 KIAA1107Q9UPP5 1409 aa18.22■□□□□ 0.51
PABPC1-201ENST00000318607 DISP3Q9P2K9 1392 aa18.22■□□□□ 0.51
PABPC1-201ENST00000318607 PER1O15534 1290 aaPredicted RBP18.22■□□□□ 0.51
PABPC1-201ENST00000318607 PLEKHH1Q9ULM0 1364 aa18.22■□□□□ 0.51
PABPC1-201ENST00000318607 MIA2Q96PC5 1412 aa18.2■□□□□ 0.5
PABPC1-201ENST00000318607 PNNQ9H307 717 aaKnown RBP18.2■□□□□ 0.5
PABPC1-201ENST00000318607 MAST1Q9Y2H9 1570 aa18.2■□□□□ 0.5
PABPC1-201ENST00000318607 LRPPRCP42704 1394 aaKnown RBP18.2■□□□□ 0.5
PABPC1-201ENST00000318607 SAFB2Q14151 953 aaKnown RBP eCLIP18.19■□□□□ 0.5
PABPC1-201ENST00000318607 MAP3K4Q9Y6R4 1608 aa18.19■□□□□ 0.5
PABPC1-201ENST00000318607 JPH4Q96JJ6 628 aa18.18■□□□□ 0.5
PABPC1-201ENST00000318607 GOLGA6L3A6NEY3 463 aa18.16■□□□□ 0.5
PABPC1-201ENST00000318607 ABCA9Q8IUA7 1624 aa18.16■□□□□ 0.5
PABPC1-201ENST00000318607 ITSN2Q9NZM3 1697 aa18.16■□□□□ 0.5
PABPC1-201ENST00000318607 NUTM2DQ5VT03 806 aaPredicted RBP18.16■□□□□ 0.5
PABPC1-201ENST00000318607 KLHL34Q8N239 644 aa18.15■□□□□ 0.5
PABPC1-201ENST00000318607 CENPJQ9HC77 1338 aaPredicted RBP18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms