RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.39■□□□□ 0.69
VAMP2-201ENST00000316509 POLR1AO95602 1720 aaPredicted RBP19.39■□□□□ 0.69
VAMP2-201ENST00000316509 ADGRL1O94910 1474 aa19.38■□□□□ 0.69
VAMP2-201ENST00000316509 PLA2R1Q13018 1463 aa19.38■□□□□ 0.69
VAMP2-201ENST00000316509 SCAPERQ9BY12 1400 aa19.38■□□□□ 0.69
VAMP2-201ENST00000316509 USP47Q96K76 1375 aa19.37■□□□□ 0.69
VAMP2-201ENST00000316509 INO80Q9ULG1 1556 aaPredicted RBP19.37■□□□□ 0.69
VAMP2-201ENST00000316509 ATP7AQ04656 1500 aa19.36■□□□□ 0.69
VAMP2-201ENST00000316509 CFAP74Q9C0B2 1584 aa19.36■□□□□ 0.69
VAMP2-201ENST00000316509 DCAF11Q8TEB1 546 aa19.35■□□□□ 0.69
VAMP2-201ENST00000316509 STAC3Q96MF2 364 aa19.35■□□□□ 0.69
VAMP2-201ENST00000316509 DHX29Q7Z478 1369 aaKnown RBP19.34■□□□□ 0.69
VAMP2-201ENST00000316509 C11orf95C9JLR9 678 aaPredicted RBP19.34■□□□□ 0.69
VAMP2-201ENST00000316509 KDM5CP41229 1560 aa19.34■□□□□ 0.69
VAMP2-201ENST00000316509 KANK1Q14678 1352 aa19.33■□□□□ 0.69
VAMP2-201ENST00000316509 DEPDC5O75140 1603 aa19.33■□□□□ 0.69
VAMP2-201ENST00000316509 EIF2AK4Q9P2K8 1649 aaKnown RBP19.33■□□□□ 0.69
VAMP2-201ENST00000316509 KIF7Q2M1P5 1343 aa19.33■□□□□ 0.69
VAMP2-201ENST00000316509 CARD11Q9BXL7 1154 aa19.32■□□□□ 0.68
VAMP2-201ENST00000316509 ROCK2O75116 1388 aaKnown RBP19.31■□□□□ 0.68
VAMP2-201ENST00000316509 ZNF326Q5BKZ1 582 aaKnown RBP19.31■□□□□ 0.68
VAMP2-201ENST00000316509 ZNF518AQ6AHZ1 1483 aa19.31■□□□□ 0.68
VAMP2-201ENST00000316509 CD109Q6YHK3 1445 aa19.3■□□□□ 0.68
VAMP2-201ENST00000316509 PRAG1Q86YV5 1406 aa19.3■□□□□ 0.68
VAMP2-201ENST00000316509 VWDEQ8N2E2 1590 aa19.29■□□□□ 0.68
VAMP2-201ENST00000316509 KDM2AQ9Y2K7 1162 aa19.29■□□□□ 0.68
VAMP2-201ENST00000316509 PTPRTO14522 1441 aa19.29■□□□□ 0.68
VAMP2-201ENST00000316509 GPRASP1Q5JY77 1395 aa19.28■□□□□ 0.68
VAMP2-201ENST00000316509 RIMBP3CA6NJZ7 1639 aa19.27■□□□□ 0.67
VAMP2-201ENST00000316509 RIMBP3BA6NNM3 1639 aa19.27■□□□□ 0.67
VAMP2-201ENST00000316509 RIMBP3Q9UFD9 1639 aa19.27■□□□□ 0.67
VAMP2-201ENST00000316509 A2MP01023 1474 aa19.26■□□□□ 0.67
VAMP2-201ENST00000316509 TET3O43151 1660 aa19.26■□□□□ 0.67
VAMP2-201ENST00000316509 LAMC1P11047 1609 aa19.26■□□□□ 0.67
VAMP2-201ENST00000316509 TRPM2O94759 1503 aa19.25■□□□□ 0.67
VAMP2-201ENST00000316509 NEO1Q92859 1461 aa19.25■□□□□ 0.67
VAMP2-201ENST00000316509 MLH3Q9UHC1 1453 aa19.25■□□□□ 0.67
VAMP2-201ENST00000316509 PRKRIP1Q9H875 184 aaPredicted RBP19.25■□□□□ 0.67
VAMP2-201ENST00000316509 TRPM1Q7Z4N2 1603 aa19.24■□□□□ 0.67
VAMP2-201ENST00000316509 NEURL4Q96JN8 1562 aa19.24■□□□□ 0.67
VAMP2-201ENST00000316509 MYT1LQ9UL68 1186 aa19.23■□□□□ 0.67
VAMP2-201ENST00000316509 PRDM15P57071 1507 aaPredicted RBP19.23■□□□□ 0.67
VAMP2-201ENST00000316509 E9PCH4 1651 aa19.23■□□□□ 0.67
VAMP2-201ENST00000316509 POGZQ7Z3K3 1410 aa19.22■□□□□ 0.67
VAMP2-201ENST00000316509 KIF3BO15066 747 aa19.22■□□□□ 0.67
VAMP2-201ENST00000316509 RGL3Q3MIN7 710 aa19.21■□□□□ 0.67
VAMP2-201ENST00000316509 KIDINS220Q9ULH0 1771 aa19.21■□□□□ 0.67
VAMP2-201ENST00000316509 BCORL1Q5H9F3 1711 aa19.21■□□□□ 0.67
VAMP2-201ENST00000316509 LMTK2Q8IWU2 1503 aa19.2■□□□□ 0.66
VAMP2-201ENST00000316509 CYB5RLQ6IPT4 315 aa19.19■□□□□ 0.66
VAMP2-201ENST00000316509 ST20-MTHFSA0A0A6YYL1 179 aa19.18■□□□□ 0.66
VAMP2-201ENST00000316509 SPHKAPQ2M3C7 1700 aa19.18■□□□□ 0.66
VAMP2-201ENST00000316509 GLI2P10070 1586 aa19.17■□□□□ 0.66
VAMP2-201ENST00000316509 MROH1Q8NDA8 1641 aa19.16■□□□□ 0.66
VAMP2-201ENST00000316509 RNF17Q9BXT8 1623 aaKnown RBP19.16■□□□□ 0.66
VAMP2-201ENST00000316509 KTN1Q86UP2 1357 aaKnown RBP19.15■□□□□ 0.66
VAMP2-201ENST00000316509 CEP152O94986 1710 aa19.15■□□□□ 0.66
VAMP2-201ENST00000316509 HECW2Q9P2P5 1572 aa19.14■□□□□ 0.65
VAMP2-201ENST00000316509 PELP1Q8IZL8 1130 aaKnown RBP19.12■□□□□ 0.65
VAMP2-201ENST00000316509 EFCAB6Q5THR3 1501 aa19.11■□□□□ 0.65
VAMP2-201ENST00000316509 NBPF1Q3BBV0 1214 aa19.1■□□□□ 0.65
VAMP2-201ENST00000316509 CLTCL1P53675 1640 aa19.1■□□□□ 0.65
VAMP2-201ENST00000316509 MAP3K4Q9Y6R4 1608 aa19.1■□□□□ 0.65
VAMP2-201ENST00000316509 SLC24A1O60721 1099 aa19.08■□□□□ 0.65
VAMP2-201ENST00000316509 MRS2Q9HD23 443 aa19.08■□□□□ 0.64
VAMP2-201ENST00000316509 MADDQ8WXG6 1647 aa19.07■□□□□ 0.64
VAMP2-201ENST00000316509 WASHC2CQ9Y4E1 1318 aa19.07■□□□□ 0.64
VAMP2-201ENST00000316509 RALBP1Q15311 655 aa19.06■□□□□ 0.64
VAMP2-201ENST00000316509 POLR3GLQ9BT43 218 aa19.06■□□□□ 0.64
VAMP2-201ENST00000316509 FRMPD1Q5SYB0 1578 aa19.05■□□□□ 0.64
VAMP2-201ENST00000316509 KIAA1210Q9ULL0 1709 aa19.05■□□□□ 0.64
VAMP2-201ENST00000316509 MYOM2P54296 1465 aa19.05■□□□□ 0.64
VAMP2-201ENST00000316509 COL17A1Q9UMD9 1497 aaPredicted RBP19.05■□□□□ 0.64
VAMP2-201ENST00000316509 TMF1P82094 1093 aa19.05■□□□□ 0.64
VAMP2-201ENST00000316509 TESK2Q96S53 571 aa19.05■□□□□ 0.64
VAMP2-201ENST00000316509 HNRNPUQ00839 825 aaKnown RBP eCLIP19.03■□□□□ 0.64
VAMP2-201ENST00000316509 PPRC1Q5VV67 1664 aaKnown RBP19.03■□□□□ 0.64
VAMP2-201ENST00000316509 SUPT16HQ9Y5B9 1047 aaKnown RBP19.02■□□□□ 0.64
VAMP2-201ENST00000316509 ABCA6Q8N139 1617 aa19.02■□□□□ 0.64
VAMP2-201ENST00000316509 CDCA8Q53HL2 280 aa19.02■□□□□ 0.63
VAMP2-201ENST00000316509 DIP2BQ9P265 1576 aa19.02■□□□□ 0.63
VAMP2-201ENST00000316509 SCAF11Q99590 1463 aaKnown RBP19.01■□□□□ 0.63
VAMP2-201ENST00000316509 KIF1BO60333 1816 aa19■□□□□ 0.63
VAMP2-201ENST00000316509 CCDC184Q52MB2 194 aa19■□□□□ 0.63
VAMP2-201ENST00000316509 RPGRIP1LQ68CZ1 1315 aa18.99■□□□□ 0.63
VAMP2-201ENST00000316509 EIF3AQ14152 1382 aaKnown RBP18.99■□□□□ 0.63
VAMP2-201ENST00000316509 RICTORQ6R327 1708 aa18.99■□□□□ 0.63
VAMP2-201ENST00000316509 IQGAP1P46940 1657 aa18.98■□□□□ 0.63
VAMP2-201ENST00000316509 DIP2CQ9Y2E4 1556 aa18.98■□□□□ 0.63
VAMP2-201ENST00000316509 DNAJC5Q9H3Z4 198 aa18.98■□□□□ 0.63
VAMP2-201ENST00000316509 ABCC3O15438 1527 aa18.98■□□□□ 0.63
VAMP2-201ENST00000316509 ARHGAP31Q2M1Z3 1444 aa18.98■□□□□ 0.63
VAMP2-201ENST00000316509 RAPGEF3O95398 923 aa18.98■□□□□ 0.63
VAMP2-201ENST00000316509 NPATQ14207 1427 aa18.97■□□□□ 0.63
VAMP2-201ENST00000316509 GGT6Q6P531 493 aa18.97■□□□□ 0.63
VAMP2-201ENST00000316509 BRD4O60885 1362 aaPredicted RBP18.97■□□□□ 0.63
VAMP2-201ENST00000316509 ZBED9Q6R2W3 1325 aa18.96■□□□□ 0.63
VAMP2-201ENST00000316509 MYBBP1AQ9BQG0 1328 aaKnown RBP18.96■□□□□ 0.63
VAMP2-201ENST00000316509 NEFLP07196 543 aa18.96■□□□□ 0.63
VAMP2-201ENST00000316509 NRXN1Q9ULB1 1477 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms