RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 FRAT2O75474 233 aaPredicted RBP18.49■□□□□ 0.55
CSNK1D-202ENST00000314028 MS4A1P11836 297 aa18.49■□□□□ 0.55
CSNK1D-202ENST00000314028 SAFB2Q14151 953 aaKnown RBP eCLIP18.49■□□□□ 0.551e-12■■■■■ 37.9
CSNK1D-202ENST00000314028 KIAA1107Q9UPP5 1409 aa18.49■□□□□ 0.55
CSNK1D-202ENST00000314028 CC2D2AQ9P2K1 1620 aa18.49■□□□□ 0.55
CSNK1D-202ENST00000314028 FAM161AQ3B820 660 aa18.48■□□□□ 0.55
CSNK1D-202ENST00000314028 MIA2Q96PC5 1412 aa18.48■□□□□ 0.55
CSNK1D-202ENST00000314028 USP35Q9P2H5 1018 aa18.47■□□□□ 0.55
CSNK1D-202ENST00000314028 CENPQQ7L2Z9 268 aaPredicted RBP18.46■□□□□ 0.55
CSNK1D-202ENST00000314028 FTSJ3Q8IY81 847 aaKnown RBP18.46■□□□□ 0.55
CSNK1D-202ENST00000314028 GRIN2BQ13224 1484 aa18.45■□□□□ 0.54
CSNK1D-202ENST00000314028 BCAR3O75815 825 aa18.45■□□□□ 0.54
CSNK1D-202ENST00000314028 CDCA8Q53HL2 280 aa18.45■□□□□ 0.54
CSNK1D-202ENST00000314028 THOC2Q8NI27 1593 aaKnown RBP18.45■□□□□ 0.54
CSNK1D-202ENST00000314028 ARID4BQ4LE39 1312 aaPredicted RBP18.44■□□□□ 0.54
CSNK1D-202ENST00000314028 DHX29Q7Z478 1369 aaKnown RBP18.43■□□□□ 0.54
CSNK1D-202ENST00000314028 PANK1Q8TE04 598 aa18.43■□□□□ 0.54
CSNK1D-202ENST00000314028 U2SURPO15042 1029 aaKnown RBP18.42■□□□□ 0.54
CSNK1D-202ENST00000314028 KDM6BO15054 1643 aa18.42■□□□□ 0.54
CSNK1D-202ENST00000314028 URB2Q14146 1524 aaKnown RBP18.42■□□□□ 0.54
CSNK1D-202ENST00000314028 UGGT2Q9NYU1 1516 aa18.41■□□□□ 0.54
CSNK1D-202ENST00000314028 NUTM2DQ5VT03 806 aaPredicted RBP18.4■□□□□ 0.54
CSNK1D-202ENST00000314028 MORC1Q86VD1 984 aa18.39■□□□□ 0.54
CSNK1D-202ENST00000314028 CARMIL2Q6F5E8 1435 aa18.39■□□□□ 0.53
CSNK1D-202ENST00000314028 NAP1L5Q96NT1 182 aaPredicted RBP18.38■□□□□ 0.53
CSNK1D-202ENST00000314028 ERCC6Q03468 1493 aa18.38■□□□□ 0.53
CSNK1D-202ENST00000314028 MAGI3Q5TCQ9 1506 aa18.38■□□□□ 0.53
CSNK1D-202ENST00000314028 HECW1Q76N89 1606 aa18.37■□□□□ 0.53
CSNK1D-202ENST00000314028 MFAP1P55081 439 aaKnown RBP18.37■□□□□ 0.53
CSNK1D-202ENST00000314028 CENPJQ9HC77 1338 aaPredicted RBP18.37■□□□□ 0.53
CSNK1D-202ENST00000314028 PPP2R1AP30153 589 aa18.36■□□□□ 0.53
CSNK1D-202ENST00000314028 ROCK1Q13464 1354 aa18.35■□□□□ 0.53
CSNK1D-202ENST00000314028 CUL7Q14999 1698 aa18.35■□□□□ 0.53
CSNK1D-202ENST00000314028 PLB1Q6P1J6 1458 aa18.35■□□□□ 0.53
CSNK1D-202ENST00000314028 U2AF1L5P0DN76 240 aaPredicted RBP18.34■□□□□ 0.53
CSNK1D-202ENST00000314028 U2AF1Q01081 240 aaKnown RBP eCLIP18.34■□□□□ 0.536e-7■□□□□ 10.7
CSNK1D-202ENST00000314028 SLC24A1O60721 1099 aa18.33■□□□□ 0.53
CSNK1D-202ENST00000314028 FOXD4L1Q9NU39 408 aa18.33■□□□□ 0.53
CSNK1D-202ENST00000314028 TRAK1Q9UPV9 953 aa18.33■□□□□ 0.53
CSNK1D-202ENST00000314028 C9orf84Q5VXU9 1444 aa18.33■□□□□ 0.52
CSNK1D-202ENST00000314028 TROQ12816 1431 aaPredicted RBP18.32■□□□□ 0.52
CSNK1D-202ENST00000314028 CAMSAP2Q08AD1 1489 aa18.31■□□□□ 0.52
CSNK1D-202ENST00000314028 KIF3BO15066 747 aa18.31■□□□□ 0.52
CSNK1D-202ENST00000314028 CFAP53Q96M91 514 aa18.31■□□□□ 0.52
CSNK1D-202ENST00000314028 TEX14Q8IWB6 1497 aa18.3■□□□□ 0.52
CSNK1D-202ENST00000314028 IQGAP2Q13576 1575 aa18.3■□□□□ 0.52
CSNK1D-202ENST00000314028 CTTNBP2Q8WZ74 1663 aa18.29■□□□□ 0.52
CSNK1D-202ENST00000314028 ITPRIPQ8IWB1 547 aa18.28■□□□□ 0.52
CSNK1D-202ENST00000314028 TPRNQ4KMQ1 711 aa18.28■□□□□ 0.52
CSNK1D-202ENST00000314028 STK26Q9P289 416 aa18.28■□□□□ 0.52
CSNK1D-202ENST00000314028 SPATA31E1Q6ZUB1 1445 aa18.28■□□□□ 0.52
CSNK1D-202ENST00000314028 DISP3Q9P2K9 1392 aa18.28■□□□□ 0.52
CSNK1D-202ENST00000314028 NCLP19338 710 aaKnown RBP18.28■□□□□ 0.52
CSNK1D-202ENST00000314028 DENND4BO75064 1496 aaPredicted RBP18.27■□□□□ 0.51
CSNK1D-202ENST00000314028 RNF123Q5XPI4 1314 aa18.27■□□□□ 0.51
CSNK1D-202ENST00000314028 GGT6Q6P531 493 aa18.26■□□□□ 0.51
CSNK1D-202ENST00000314028 TRIM44Q96DX7 344 aaPredicted RBP18.26■□□□□ 0.51
CSNK1D-202ENST00000314028 E9PSI1 815 aa18.25■□□□□ 0.51
CSNK1D-202ENST00000314028 POGKQ9P215 609 aa18.25■□□□□ 0.51
CSNK1D-202ENST00000314028 ARHGEF11O15085 1522 aa18.25■□□□□ 0.51
CSNK1D-202ENST00000314028 CFAP70Q5T0N1 1121 aa18.25■□□□□ 0.51
CSNK1D-202ENST00000314028 DUSP27Q5VZP5 1158 aa18.24■□□□□ 0.51
CSNK1D-202ENST00000314028 SMC4Q9NTJ3 1288 aa18.24■□□□□ 0.51
CSNK1D-202ENST00000314028 MAPK8IP3Q9UPT6 1336 aa18.23■□□□□ 0.51
CSNK1D-202ENST00000314028 UBE2Q2Q8WVN8 375 aa18.23■□□□□ 0.51
CSNK1D-202ENST00000314028 ZNF608Q9ULD9 1512 aaPredicted RBP18.23■□□□□ 0.51
CSNK1D-202ENST00000314028 KDM5BQ9UGL1 1544 aa18.23■□□□□ 0.51
CSNK1D-202ENST00000314028 HSP90AB1P08238 724 aaKnown RBP18.22■□□□□ 0.51
CSNK1D-202ENST00000314028 TCOF1Q13428 1488 aaKnown RBP18.22■□□□□ 0.51
CSNK1D-202ENST00000314028 PZPP20742 1482 aa18.22■□□□□ 0.51
CSNK1D-202ENST00000314028 APBB1O00213 710 aa18.22■□□□□ 0.51
CSNK1D-202ENST00000314028 AFAP1Q8N556 730 aa18.22■□□□□ 0.51
CSNK1D-202ENST00000314028 RWDD1Q9H446 243 aaPredicted RBP18.21■□□□□ 0.51
CSNK1D-202ENST00000314028 STAG3Q9UJ98 1225 aa18.21■□□□□ 0.51
CSNK1D-202ENST00000314028 PTPRGP23470 1445 aa18.21■□□□□ 0.51
CSNK1D-202ENST00000314028 EFCAB2Q5VUJ9 269 aa18.21■□□□□ 0.51
CSNK1D-202ENST00000314028 HSCBQ8IWL3 235 aa18.21■□□□□ 0.51
CSNK1D-202ENST00000314028 ANP32BQ92688 251 aaKnown RBP18.21■□□□□ 0.51
CSNK1D-202ENST00000314028 ERBINQ96RT1 1412 aa18.2■□□□□ 0.5
CSNK1D-202ENST00000314028 CGNL1Q0VF96 1302 aa18.2■□□□□ 0.5
CSNK1D-202ENST00000314028 PER1O15534 1290 aaPredicted RBP18.2■□□□□ 0.5
CSNK1D-202ENST00000314028 SRPK2P78362 688 aaKnown RBP18.2■□□□□ 0.5
CSNK1D-202ENST00000314028 SPAG9O60271 1321 aaKnown RBP18.2■□□□□ 0.5
CSNK1D-202ENST00000314028 ELL2O00472 640 aaPredicted RBP18.2■□□□□ 0.5
CSNK1D-202ENST00000314028 IGHDP01880 384 aa18.2■□□□□ 0.5
CSNK1D-202ENST00000314028 SPINK5Q9NQ38 1064 aaPredicted RBP18.19■□□□□ 0.5
CSNK1D-202ENST00000314028 TMEM132EQ6IEE7 984 aa18.19■□□□□ 0.5
CSNK1D-202ENST00000314028 PMFBP1Q8TBY8 1022 aa18.19■□□□□ 0.5
CSNK1D-202ENST00000314028 ZBTB7CA1YPR0 619 aa18.18■□□□□ 0.5
CSNK1D-202ENST00000314028 GOLGA6L3A6NEY3 463 aa18.18■□□□□ 0.5
CSNK1D-202ENST00000314028 NUP153P49790 1475 aaKnown RBP18.18■□□□□ 0.5
CSNK1D-202ENST00000314028 SLFN5Q08AF3 891 aa18.18■□□□□ 0.5
CSNK1D-202ENST00000314028 GPATCH8Q9UKJ3 1502 aaKnown RBP18.18■□□□□ 0.5
CSNK1D-202ENST00000314028 L1TD1Q5T7N2 865 aaKnown RBP18.17■□□□□ 0.5
CSNK1D-202ENST00000314028 TCP11L2Q8N4U5 519 aa18.17■□□□□ 0.5
CSNK1D-202ENST00000314028 RSPH4AQ5TD94 716 aa18.16■□□□□ 0.5
CSNK1D-202ENST00000314028 LRPPRCP42704 1394 aaKnown RBP18.16■□□□□ 0.5
CSNK1D-202ENST00000314028 C8orf34Q49A92 452 aa18.16■□□□□ 0.5
CSNK1D-202ENST00000314028 PNNQ9H307 717 aaKnown RBP18.16■□□□□ 0.5
CSNK1D-202ENST00000314028 PLEKHH1Q9ULM0 1364 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms