RNA–Protein interactions for RNA: ENST00000311420.13

MDM2-204, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5

Gene MDM2, Length 1,583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-204ENST00000311420 TSPY4P0CV99 314 aa17.05■□□□□ 0.32
MDM2-204ENST00000311420 TSPY10P0CW01 314 aa17.05■□□□□ 0.32
MDM2-204ENST00000311420 UBAP1LF5GYI3 381 aa17.04■□□□□ 0.32
MDM2-204ENST00000311420 KANK4Q5T7N3 995 aaPredicted RBP17.04■□□□□ 0.32
MDM2-204ENST00000311420 IQSEC2Q5JU85 1478 aa17.04■□□□□ 0.32
MDM2-204ENST00000311420 TNRQ92752 1358 aa17.03■□□□□ 0.32
MDM2-204ENST00000311420 A2ML1A8K2U0 1454 aa17.03■□□□□ 0.32
MDM2-204ENST00000311420 ZNF142P52746 1687 aaPredicted RBP17.01■□□□□ 0.31
MDM2-204ENST00000311420 LRRC9Q6ZRR7 1453 aa17■□□□□ 0.31
MDM2-204ENST00000311420 VPS8Q8N3P4 1428 aa16.99■□□□□ 0.31
MDM2-204ENST00000311420 DNMT1P26358 1616 aaKnown RBP16.99■□□□□ 0.31
MDM2-204ENST00000311420 PZPP20742 1482 aa16.99■□□□□ 0.31
MDM2-204ENST00000311420 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.99■□□□□ 0.317e-15■■□□□ 12.9
MDM2-204ENST00000311420 MIA2Q96PC5 1412 aa16.99■□□□□ 0.31
MDM2-204ENST00000311420 KDM5DQ9BY66 1539 aa16.97■□□□□ 0.31
MDM2-204ENST00000311420 ANKLE2Q86XL3 938 aa16.97■□□□□ 0.31
MDM2-204ENST00000311420 THEMISQ8N1K5 641 aaPredicted RBP16.97■□□□□ 0.31
MDM2-204ENST00000311420 ARHGEF5Q12774 1597 aa16.95■□□□□ 0.3
MDM2-204ENST00000311420 SOCS7O14512 581 aa16.94■□□□□ 0.3
MDM2-204ENST00000311420 PIP4K2BP78356 416 aa16.92■□□□□ 0.3
MDM2-204ENST00000311420 NEURL4Q96JN8 1562 aa16.91■□□□□ 0.3
MDM2-204ENST00000311420 FAM135AQ9P2D6 1515 aa16.91■□□□□ 0.3
MDM2-204ENST00000311420 SHANK2Q9UPX8 1470 aa16.91■□□□□ 0.3
MDM2-204ENST00000311420 SCAF1Q9H7N4 1312 aaKnown RBP16.9■□□□□ 0.3
MDM2-204ENST00000311420 NLRP1Q9C000 1473 aa16.9■□□□□ 0.3
MDM2-204ENST00000311420 MYOM3Q5VTT5 1437 aa16.9■□□□□ 0.3
MDM2-204ENST00000311420 HSPA1LP34931 641 aa16.89■□□□□ 0.3
MDM2-204ENST00000311420 SPATA31D1Q6ZQQ2 1576 aa16.89■□□□□ 0.29
MDM2-204ENST00000311420 UGGT1Q9NYU2 1555 aa16.89■□□□□ 0.29
MDM2-204ENST00000311420 ABCC3O15438 1527 aa16.88■□□□□ 0.29
MDM2-204ENST00000311420 TOM1O60784 492 aa16.88■□□□□ 0.29
MDM2-204ENST00000311420 RRP7BPQ9NSQ0 103 aa16.88■□□□□ 0.29
MDM2-204ENST00000311420 NPHP4O75161 1426 aaPredicted RBP16.88■□□□□ 0.29
MDM2-204ENST00000311420 MAP3K1Q13233 1512 aa16.87■□□□□ 0.29
MDM2-204ENST00000311420 MAST1Q9Y2H9 1570 aa16.86■□□□□ 0.29
MDM2-204ENST00000311420 MED14O60244 1454 aa16.86■□□□□ 0.29
MDM2-204ENST00000311420 CPS1P31327 1500 aa16.85■□□□□ 0.29
MDM2-204ENST00000311420 RNF17Q9BXT8 1623 aaKnown RBP16.84■□□□□ 0.29
MDM2-204ENST00000311420 ERVK-7P63135 1459 aa16.84■□□□□ 0.29
MDM2-204ENST00000311420 ABCC5O15440 1437 aa16.84■□□□□ 0.29
MDM2-204ENST00000311420 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.84■□□□□ 0.291e-8■■□□□ 11.6
MDM2-204ENST00000311420 VWDEQ8N2E2 1590 aa16.84■□□□□ 0.29
MDM2-204ENST00000311420 KIF15Q9NS87 1388 aa16.83■□□□□ 0.28
MDM2-204ENST00000311420 MROH1Q8NDA8 1641 aa16.83■□□□□ 0.28
MDM2-204ENST00000311420 LTKP29376 864 aa16.82■□□□□ 0.28
MDM2-204ENST00000311420 POLR1AO95602 1720 aaPredicted RBP16.82■□□□□ 0.28
MDM2-204ENST00000311420 APLP2Q06481 763 aa16.81■□□□□ 0.28
MDM2-204ENST00000311420 CHIC2Q9UKJ5 165 aa16.81■□□□□ 0.28
MDM2-204ENST00000311420 DUOX2Q9NRD8 1548 aa16.81■□□□□ 0.28
MDM2-204ENST00000311420 TXNDC2Q86VQ3 553 aa16.8■□□□□ 0.28
MDM2-204ENST00000311420 DEPDC5O75140 1603 aa16.79■□□□□ 0.28
MDM2-204ENST00000311420 EIF2AK4Q9P2K8 1649 aaKnown RBP16.78■□□□□ 0.28
MDM2-204ENST00000311420 SENP3Q9H4L4 574 aaPredicted RBP16.77■□□□□ 0.28
MDM2-204ENST00000311420 ZC3H13Q5T200 1668 aaKnown RBP16.76■□□□□ 0.27
MDM2-204ENST00000311420 DAPK1P53355 1430 aa16.76■□□□□ 0.27
MDM2-204ENST00000311420 ARHGAP31Q2M1Z3 1444 aa16.76■□□□□ 0.27
MDM2-204ENST00000311420 LRRC7Q96NW7 1537 aa16.76■□□□□ 0.27
MDM2-204ENST00000311420 ALKQ9UM73 1620 aa16.76■□□□□ 0.27
MDM2-204ENST00000311420 ERBINQ96RT1 1412 aa16.75■□□□□ 0.27
MDM2-204ENST00000311420 IQGAP1P46940 1657 aa16.75■□□□□ 0.27
MDM2-204ENST00000311420 FGD6Q6ZV73 1430 aa16.75■□□□□ 0.27
MDM2-204ENST00000311420 SCAF11Q99590 1463 aaKnown RBP16.75■□□□□ 0.27
MDM2-204ENST00000311420 CEP152O94986 1710 aa16.74■□□□□ 0.27
MDM2-204ENST00000311420 IDI1Q13907 227 aa16.74■□□□□ 0.27
MDM2-204ENST00000311420 CFAP65Q6ZU64 1925 aaKnown RBP16.73■□□□□ 0.27
MDM2-204ENST00000311420 EID1Q9Y6B2 187 aa16.73■□□□□ 0.27
MDM2-204ENST00000311420 PTPN23Q9H3S7 1636 aa16.73■□□□□ 0.27
MDM2-204ENST00000311420 ARHGAP23Q9P227 1491 aa16.72■□□□□ 0.27
MDM2-204ENST00000311420 STRCP1A6NGW2 1772 aa16.72■□□□□ 0.27
MDM2-204ENST00000311420 PRDM15P57071 1507 aaPredicted RBP16.72■□□□□ 0.27
MDM2-204ENST00000311420 ANKRD30AQ9BXX3 1397 aa16.72■□□□□ 0.27
MDM2-204ENST00000311420 STAG3Q9UJ98 1225 aa16.72■□□□□ 0.27
MDM2-204ENST00000311420 KANK1Q14678 1352 aa16.71■□□□□ 0.27
MDM2-204ENST00000311420 UBR1Q8IWV7 1749 aa16.71■□□□□ 0.26
MDM2-204ENST00000311420 TMEM2Q9UHN6 1383 aa16.7■□□□□ 0.26
MDM2-204ENST00000311420 SLIT1O75093 1534 aa16.7■□□□□ 0.26
MDM2-204ENST00000311420 MED1Q15648 1581 aaPredicted RBP16.68■□□□□ 0.26
MDM2-204ENST00000311420 FAM50AQ14320 339 aaKnown RBP16.68■□□□□ 0.26
MDM2-204ENST00000311420 SLC26A8Q96RN1 970 aa16.67■□□□□ 0.26
MDM2-204ENST00000311420 RBM33Q96EV2 1170 aaKnown RBP16.66■□□□□ 0.26
MDM2-204ENST00000311420 CROCC2H7BZ55 1655 aa16.66■□□□□ 0.26
MDM2-204ENST00000311420 PHF23Q9BUL5 403 aaPredicted RBP16.64■□□□□ 0.25
MDM2-204ENST00000311420 PIK3C2BO00750 1634 aa16.64■□□□□ 0.25
MDM2-204ENST00000311420 LMTK2Q8IWU2 1503 aa16.64■□□□□ 0.25
MDM2-204ENST00000311420 NOS1P29475 1434 aa16.63■□□□□ 0.25
MDM2-204ENST00000311420 KCNA6P17658 529 aa16.63■□□□□ 0.25
MDM2-204ENST00000311420 TMEM94Q12767 1356 aa16.62■□□□□ 0.25
MDM2-204ENST00000311420 EFCAB6Q5THR3 1501 aa16.62■□□□□ 0.25
MDM2-204ENST00000311420 PROSER2Q86WR7 435 aaPredicted RBP16.61■□□□□ 0.25
MDM2-204ENST00000311420 SLC52A1Q9NWF4 448 aa16.61■□□□□ 0.25
MDM2-204ENST00000311420 SYNMO15061 1565 aa16.61■□□□□ 0.25
MDM2-204ENST00000311420 BCANQ96GW7 911 aa16.6■□□□□ 0.25
MDM2-204ENST00000311420 ANKRD50Q9ULJ7 1429 aa16.59■□□□□ 0.25
MDM2-204ENST00000311420 ADGRL2O95490 1459 aa16.59■□□□□ 0.25
MDM2-204ENST00000311420 RGS17Q9UGC6 210 aaPredicted RBP16.58■□□□□ 0.24
MDM2-204ENST00000311420 TET3O43151 1660 aa16.58■□□□□ 0.24
MDM2-204ENST00000311420 FAM135BQ49AJ0 1406 aa16.57■□□□□ 0.24
MDM2-204ENST00000311420 XIRP1Q702N8 1843 aaKnown RBP16.54■□□□□ 0.24
MDM2-204ENST00000311420 ADGRB3O60242 1522 aa16.53■□□□□ 0.24
MDM2-204ENST00000311420 CHGAP10645 457 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms