RNA–Protein interactions for RNA: ENST00000310931.8

HDLBP-201, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDLBP, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-201ENST00000310931 FAM69CQ0P6D2 419 aa12.86□□□□□ -0.35
HDLBP-201ENST00000310931 DHX57Q6P158 1386 aaKnown RBP12.85□□□□□ -0.35
HDLBP-201ENST00000310931 PTPRKQ15262 1439 aa12.85□□□□□ -0.35
HDLBP-201ENST00000310931 MAP3K4Q9Y6R4 1608 aa12.85□□□□□ -0.35
HDLBP-201ENST00000310931 KANK1Q14678 1352 aa12.85□□□□□ -0.35
HDLBP-201ENST00000310931 DIP2BQ9P265 1576 aa12.83□□□□□ -0.36
HDLBP-201ENST00000310931 NAP1L5Q96NT1 182 aaPredicted RBP12.83□□□□□ -0.36
HDLBP-201ENST00000310931 POGZQ7Z3K3 1410 aa12.82□□□□□ -0.36
HDLBP-201ENST00000310931 CDK11BP21127 795 aaKnown RBP12.81□□□□□ -0.36
HDLBP-201ENST00000310931 ATP7AQ04656 1500 aa12.8□□□□□ -0.36
HDLBP-201ENST00000310931 MAGI2Q86UL8 1455 aa12.8□□□□□ -0.36
HDLBP-201ENST00000310931 MLH3Q9UHC1 1453 aa12.8□□□□□ -0.36
HDLBP-201ENST00000310931 KDM5DQ9BY66 1539 aa12.78□□□□□ -0.36
HDLBP-201ENST00000310931 EIF2AK4Q9P2K8 1649 aaKnown RBP12.78□□□□□ -0.36
HDLBP-201ENST00000310931 SLC4A1APQ9BWU0 796 aaKnown RBP12.78□□□□□ -0.36
HDLBP-201ENST00000310931 TRAPPC8Q9Y2L5 1435 aa12.77□□□□□ -0.36
HDLBP-201ENST00000310931 DNAJC5Q9H3Z4 198 aa12.77□□□□□ -0.36
HDLBP-201ENST00000310931 ZFYVE16Q7Z3T8 1539 aa12.77□□□□□ -0.37
HDLBP-201ENST00000310931 INO80Q9ULG1 1556 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-201ENST00000310931 HECW2Q9P2P5 1572 aa12.77□□□□□ -0.37
HDLBP-201ENST00000310931 CCDC136Q96JN2 1154 aa12.77□□□□□ -0.37
HDLBP-201ENST00000310931 KDM5CP41229 1560 aa12.76□□□□□ -0.37
HDLBP-201ENST00000310931 MPHOSPH9Q99550 1183 aa12.76□□□□□ -0.37
HDLBP-201ENST00000310931 DHX29Q7Z478 1369 aaKnown RBP12.76□□□□□ -0.37
HDLBP-201ENST00000310931 NUP155O75694 1391 aa12.75□□□□□ -0.37
HDLBP-201ENST00000310931 ARHGEF12Q9NZN5 1544 aa12.75□□□□□ -0.37
HDLBP-201ENST00000310931 TONSLQ96HA7 1378 aa12.74□□□□□ -0.37
HDLBP-201ENST00000310931 AMER1Q5JTC6 1135 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-201ENST00000310931 TRIM44Q96DX7 344 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-201ENST00000310931 PPP6R1Q9UPN7 881 aa12.73□□□□□ -0.37
HDLBP-201ENST00000310931 UNC13BO14795 1591 aa12.73□□□□□ -0.37
HDLBP-201ENST00000310931 ZMYM4Q5VZL5 1548 aa12.73□□□□□ -0.37
HDLBP-201ENST00000310931 FAM135AQ9P2D6 1515 aa12.72□□□□□ -0.37
HDLBP-201ENST00000310931 HNRNPUQ00839 825 aaKnown RBP eCLIP12.72□□□□□ -0.371e-6■□□□□ 8.9
HDLBP-201ENST00000310931 A2MP01023 1474 aa12.72□□□□□ -0.37
HDLBP-201ENST00000310931 AFAP1Q8N556 730 aa12.72□□□□□ -0.37
HDLBP-201ENST00000310931 IRX6P78412 446 aaPredicted RBP12.7□□□□□ -0.38
HDLBP-201ENST00000310931 HSP90AA1P07900 732 aaKnown RBP12.69□□□□□ -0.38
HDLBP-201ENST00000310931 IQGAP3Q86VI3 1631 aa12.68□□□□□ -0.38
HDLBP-201ENST00000310931 STAC3Q96MF2 364 aa12.67□□□□□ -0.38
HDLBP-201ENST00000310931 REREQ9P2R6 1566 aa12.67□□□□□ -0.38
HDLBP-201ENST00000310931 ATP10AO60312 1499 aa12.67□□□□□ -0.38
HDLBP-201ENST00000310931 PKD2Q13563 968 aa12.66□□□□□ -0.38
HDLBP-201ENST00000310931 KIF3BO15066 747 aa12.66□□□□□ -0.38
HDLBP-201ENST00000310931 NCLP19338 710 aaKnown RBP12.66□□□□□ -0.38
HDLBP-201ENST00000310931 TRHP20396 242 aaPredicted RBP12.66□□□□□ -0.38
HDLBP-201ENST00000310931 BCORL1Q5H9F3 1711 aa12.66□□□□□ -0.38
HDLBP-201ENST00000310931 PZPP20742 1482 aa12.66□□□□□ -0.38
HDLBP-201ENST00000310931 NOP58Q9Y2X3 529 aaKnown RBP12.66□□□□□ -0.38
HDLBP-201ENST00000310931 PPM1GO15355 546 aaPredicted RBP12.65□□□□□ -0.38
HDLBP-201ENST00000310931 VSIG10Q8N0Z9 540 aa12.65□□□□□ -0.38
HDLBP-201ENST00000310931 RICTORQ6R327 1708 aa12.65□□□□□ -0.38
HDLBP-201ENST00000310931 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.65□□□□□ -0.383e-10■■□□□ 13.2
HDLBP-201ENST00000310931 SUPT16HQ9Y5B9 1047 aaKnown RBP12.65□□□□□ -0.38
HDLBP-201ENST00000310931 UPF2Q9HAU5 1272 aaKnown RBP12.64□□□□□ -0.39
HDLBP-201ENST00000310931 KIF13AQ9H1H9 1805 aa12.64□□□□□ -0.39
HDLBP-201ENST00000310931 KIDINS220Q9ULH0 1771 aa12.64□□□□□ -0.39
HDLBP-201ENST00000310931 ESF1Q9H501 851 aaKnown RBP12.64□□□□□ -0.39
HDLBP-201ENST00000310931 DEPDC5O75140 1603 aa12.63□□□□□ -0.39
HDLBP-201ENST00000310931 RNF17Q9BXT8 1623 aaKnown RBP12.63□□□□□ -0.39
HDLBP-201ENST00000310931 ANKRD30BQ9BXX2 1392 aa12.63□□□□□ -0.39
HDLBP-201ENST00000310931 LAS1LQ9Y4W2 734 aaKnown RBP12.63□□□□□ -0.39
HDLBP-201ENST00000310931 AGLP35573 1532 aa12.63□□□□□ -0.39
HDLBP-201ENST00000310931 PRDM15P57071 1507 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-201ENST00000310931 RBM19Q9Y4C8 960 aaKnown RBP12.63□□□□□ -0.39
HDLBP-201ENST00000310931 LMTK2Q8IWU2 1503 aa12.63□□□□□ -0.39
HDLBP-201ENST00000310931 RPRD2Q5VT52 1461 aaKnown RBP12.63□□□□□ -0.39
HDLBP-201ENST00000310931 KDM6BO15054 1643 aa12.62□□□□□ -0.39
HDLBP-201ENST00000310931 CCDC144AA2RUR9 1427 aa12.62□□□□□ -0.39
HDLBP-201ENST00000310931 TET3O43151 1660 aa12.62□□□□□ -0.39
HDLBP-201ENST00000310931 TSPOAP1O95153 1857 aa12.61□□□□□ -0.39
HDLBP-201ENST00000310931 ZC3H13Q5T200 1668 aaKnown RBP12.61□□□□□ -0.39
HDLBP-201ENST00000310931 ARID4BQ4LE39 1312 aaPredicted RBP12.61□□□□□ -0.39
HDLBP-201ENST00000310931 PPRC1Q5VV67 1664 aaKnown RBP12.61□□□□□ -0.39
HDLBP-201ENST00000310931 DIP2CQ9Y2E4 1556 aa12.61□□□□□ -0.39
HDLBP-201ENST00000310931 CANXP27824 592 aaKnown RBP12.61□□□□□ -0.39
HDLBP-201ENST00000310931 RAPGEF3O95398 923 aa12.61□□□□□ -0.39
HDLBP-201ENST00000310931 ARHGEF40Q8TER5 1519 aa12.6□□□□□ -0.39
HDLBP-201ENST00000310931 DDX10Q13206 875 aaKnown RBP12.59□□□□□ -0.39
HDLBP-201ENST00000310931 ABCA6Q8N139 1617 aa12.59□□□□□ -0.39
HDLBP-201ENST00000310931 VWDEQ8N2E2 1590 aa12.58□□□□□ -0.4
HDLBP-201ENST00000310931 WASHC2CQ9Y4E1 1318 aa12.58□□□□□ -0.4
HDLBP-201ENST00000310931 FRMPD1Q5SYB0 1578 aa12.57□□□□□ -0.4
HDLBP-201ENST00000310931 CNTLNQ9NXG0 1405 aa12.56□□□□□ -0.4
HDLBP-201ENST00000310931 DDRGK1Q96HY6 314 aa12.56□□□□□ -0.4
HDLBP-201ENST00000310931 PPP1R15AO75807 674 aaPredicted RBP12.55□□□□□ -0.4
HDLBP-201ENST00000310931 TSHZ2Q9NRE2 1034 aa12.55□□□□□ -0.4
HDLBP-201ENST00000310931 PODXL2Q9NZ53 605 aa12.55□□□□□ -0.4
HDLBP-201ENST00000310931 ARHGAP31Q2M1Z3 1444 aa12.55□□□□□ -0.4
HDLBP-201ENST00000310931 SLC24A1O60721 1099 aa12.54□□□□□ -0.4
HDLBP-201ENST00000310931 GGT6Q6P531 493 aa12.54□□□□□ -0.4
HDLBP-201ENST00000310931 SIN3AQ96ST3 1273 aa12.54□□□□□ -0.4
HDLBP-201ENST00000310931 NEURL4Q96JN8 1562 aa12.54□□□□□ -0.4
HDLBP-201ENST00000310931 FAM9BQ8IZU0 186 aa12.54□□□□□ -0.4
HDLBP-201ENST00000310931 TRPM2O94759 1503 aa12.54□□□□□ -0.4
HDLBP-201ENST00000310931 EFCAB6Q5THR3 1501 aa12.54□□□□□ -0.4
HDLBP-201ENST00000310931 PKNOX2Q96KN3 472 aa12.53□□□□□ -0.4
HDLBP-201ENST00000310931 DNTTIP2Q5QJE6 756 aaKnown RBP12.53□□□□□ -0.4
HDLBP-201ENST00000310931 PTPRTO14522 1441 aa12.52□□□□□ -0.4
HDLBP-201ENST00000310931 YEATS2Q9ULM3 1422 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms