RNA–Protein interactions for RNA: ENST00000310483.10

SLC39A1-201, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-201ENST00000310483 ARHGEF12Q9NZN5 1544 aa20.98■□□□□ 0.95
SLC39A1-201ENST00000310483 TCERG1O14776 1098 aaKnown RBP20.97■□□□□ 0.95
SLC39A1-201ENST00000310483 ADCY10Q96PN6 1610 aa20.97■□□□□ 0.95
SLC39A1-201ENST00000310483 C9orf84Q5VXU9 1444 aa20.97■□□□□ 0.95
SLC39A1-201ENST00000310483 CDC42BPAQ5VT25 1732 aa20.97■□□□□ 0.95
SLC39A1-201ENST00000310483 NLRP13Q86W25 1043 aa20.95■□□□□ 0.94
SLC39A1-201ENST00000310483 BACH2Q9BYV9 841 aa20.95■□□□□ 0.94
SLC39A1-201ENST00000310483 CEP170Q5SW79 1584 aa20.95■□□□□ 0.94
SLC39A1-201ENST00000310483 KTN1Q86UP2 1357 aaKnown RBP20.94■□□□□ 0.94
SLC39A1-201ENST00000310483 IFT140Q96RY7 1462 aa20.94■□□□□ 0.94
SLC39A1-201ENST00000310483 PARD3Q8TEW0 1356 aa20.93■□□□□ 0.94
SLC39A1-201ENST00000310483 HNRNPMP52272 730 aaKnown RBP eCLIP20.93■□□□□ 0.94
SLC39A1-201ENST00000310483 NBPF1Q3BBV0 1214 aa20.93■□□□□ 0.94
SLC39A1-201ENST00000310483 CC2D1BQ5T0F9 858 aaKnown RBP20.93■□□□□ 0.94
SLC39A1-201ENST00000310483 RGL3Q3MIN7 710 aa20.92■□□□□ 0.94
SLC39A1-201ENST00000310483 FBLN2P98095 1184 aa20.91■□□□□ 0.94
SLC39A1-201ENST00000310483 PER1O15534 1290 aaPredicted RBP20.9■□□□□ 0.94
SLC39A1-201ENST00000310483 TSPY4P0CV99 314 aa20.9■□□□□ 0.94
SLC39A1-201ENST00000310483 TSPY10P0CW01 314 aa20.9■□□□□ 0.94
SLC39A1-201ENST00000310483 EIF4G3O43432 1585 aaKnown RBP20.89■□□□□ 0.93
SLC39A1-201ENST00000310483 NEFMP07197 916 aa20.89■□□□□ 0.93
SLC39A1-201ENST00000310483 KDM5DQ9BY66 1539 aa20.88■□□□□ 0.93
SLC39A1-201ENST00000310483 PDE3BQ13370 1112 aa20.88■□□□□ 0.93
SLC39A1-201ENST00000310483 CRBNQ96SW2 442 aa20.88■□□□□ 0.93
SLC39A1-201ENST00000310483 PLEKHD1A6NEE1 506 aa20.88■□□□□ 0.93
SLC39A1-201ENST00000310483 IL27Q8NEV9 243 aa20.88■□□□□ 0.93
SLC39A1-201ENST00000310483 CHMP7Q8WUX9 453 aaPredicted RBP20.87■□□□□ 0.93
SLC39A1-201ENST00000310483 ABCC10Q5T3U5 1492 aa20.87■□□□□ 0.93
SLC39A1-201ENST00000310483 SHANK2Q9UPX8 1470 aa20.87■□□□□ 0.93
SLC39A1-201ENST00000310483 PTPRGP23470 1445 aa20.86■□□□□ 0.93
SLC39A1-201ENST00000310483 PRAG1Q86YV5 1406 aa20.85■□□□□ 0.93
SLC39A1-201ENST00000310483 TRPM1Q7Z4N2 1603 aa20.85■□□□□ 0.93
SLC39A1-201ENST00000310483 DISP3Q9P2K9 1392 aa20.85■□□□□ 0.93
SLC39A1-201ENST00000310483 MS4A1P11836 297 aa20.85■□□□□ 0.93
SLC39A1-201ENST00000310483 C20orf194Q5TEA3 1177 aa20.84■□□□□ 0.93
SLC39A1-201ENST00000310483 JPH4Q96JJ6 628 aa20.83■□□□□ 0.93
SLC39A1-201ENST00000310483 MAGI1Q96QZ7 1491 aaPredicted RBP20.83■□□□□ 0.92
SLC39A1-201ENST00000310483 PANK3Q9H999 370 aa20.83■□□□□ 0.92
SLC39A1-201ENST00000310483 FAM135AQ9P2D6 1515 aa20.81■□□□□ 0.92
SLC39A1-201ENST00000310483 ATP10BO94823 1461 aa20.81■□□□□ 0.92
SLC39A1-201ENST00000310483 RTN4Q9NQC3 1192 aaKnown RBP20.81■□□□□ 0.92
SLC39A1-201ENST00000310483 TESK2Q96S53 571 aa20.79■□□□□ 0.92
SLC39A1-201ENST00000310483 CCDC144AA2RUR9 1427 aa20.79■□□□□ 0.92
SLC39A1-201ENST00000310483 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.79■□□□□ 0.92
SLC39A1-201ENST00000310483 BLMP54132 1417 aaPredicted RBP20.79■□□□□ 0.92
SLC39A1-201ENST00000310483 CARMIL2Q6F5E8 1435 aa20.79■□□□□ 0.92
SLC39A1-201ENST00000310483 COL17A1Q9UMD9 1497 aaPredicted RBP20.78■□□□□ 0.92
SLC39A1-201ENST00000310483 ABCA8O94911 1581 aa20.77■□□□□ 0.92
SLC39A1-201ENST00000310483 SLC4A3P48751 1232 aa20.77■□□□□ 0.92
SLC39A1-201ENST00000310483 A2MP01023 1474 aa20.77■□□□□ 0.91
SLC39A1-201ENST00000310483 PLA2R1Q13018 1463 aa20.76■□□□□ 0.91
SLC39A1-201ENST00000310483 ANO8Q9HCE9 1232 aaPredicted RBP20.75■□□□□ 0.91
SLC39A1-201ENST00000310483 ADAMTS8Q9UP79 889 aa20.75■□□□□ 0.91
SLC39A1-201ENST00000310483 SYNJ2O15056 1496 aa20.74■□□□□ 0.91
SLC39A1-201ENST00000310483 GPRASP1Q5JY77 1395 aa20.73■□□□□ 0.91
SLC39A1-201ENST00000310483 ERBINQ96RT1 1412 aa20.73■□□□□ 0.91
SLC39A1-201ENST00000310483 USP35Q9P2H5 1018 aa20.73■□□□□ 0.91
SLC39A1-201ENST00000310483 PPM1GO15355 546 aaPredicted RBP20.72■□□□□ 0.91
SLC39A1-201ENST00000310483 ARHGEF5Q12774 1597 aa20.72■□□□□ 0.91
SLC39A1-201ENST00000310483 SAMD9LQ8IVG5 1584 aa20.72■□□□□ 0.91
SLC39A1-201ENST00000310483 ZMYM4Q5VZL5 1548 aa20.71■□□□□ 0.91
SLC39A1-201ENST00000310483 PRDM15P57071 1507 aaPredicted RBP20.71■□□□□ 0.91
SLC39A1-201ENST00000310483 CCDC141Q6ZP82 1450 aa20.7■□□□□ 0.9
SLC39A1-201ENST00000310483 KDM2BQ8NHM5 1336 aa20.7■□□□□ 0.9
SLC39A1-201ENST00000310483 PLEKHH1Q9ULM0 1364 aa20.69■□□□□ 0.9
SLC39A1-201ENST00000310483 WASHC2CQ9Y4E1 1318 aa20.69■□□□□ 0.9
SLC39A1-201ENST00000310483 TMF1P82094 1093 aa20.68■□□□□ 0.9
SLC39A1-201ENST00000310483 MYO5CQ9NQX4 1742 aa20.68■□□□□ 0.9
SLC39A1-201ENST00000310483 CDC42BPBQ9Y5S2 1711 aa20.67■□□□□ 0.9
SLC39A1-201ENST00000310483 NUP160Q12769 1436 aa20.67■□□□□ 0.9
SLC39A1-201ENST00000310483 DDRGK1Q96HY6 314 aa20.67■□□□□ 0.9
SLC39A1-201ENST00000310483 DUSP27Q5VZP5 1158 aa20.65■□□□□ 0.9
SLC39A1-201ENST00000310483 INSRP06213 1382 aa20.64■□□□□ 0.9
SLC39A1-201ENST00000310483 NFKBIBQ15653 356 aa20.64■□□□□ 0.89
SLC39A1-201ENST00000310483 MAGI2Q86UL8 1455 aa20.63■□□□□ 0.89
SLC39A1-201ENST00000310483 PLEKHH2Q8IVE3 1493 aa20.63■□□□□ 0.89
SLC39A1-201ENST00000310483 PPP2R1AP30153 589 aa20.63■□□□□ 0.89
SLC39A1-201ENST00000310483 SYCP2Q9BX26 1530 aa20.63■□□□□ 0.89
SLC39A1-201ENST00000310483 ERCC6Q03468 1493 aa20.63■□□□□ 0.89
SLC39A1-201ENST00000310483 LAMC1P11047 1609 aa20.63■□□□□ 0.89
SLC39A1-201ENST00000310483 C8orf34Q49A92 452 aa20.62■□□□□ 0.89
SLC39A1-201ENST00000310483 CENPQQ7L2Z9 268 aaPredicted RBP20.61■□□□□ 0.89
SLC39A1-201ENST00000310483 WDR43Q15061 677 aaKnown RBP eCLIP20.61■□□□□ 0.89
SLC39A1-201ENST00000310483 BRPF3Q9ULD4 1205 aa20.61■□□□□ 0.89
SLC39A1-201ENST00000310483 PREX2Q70Z35 1606 aa20.6■□□□□ 0.89
SLC39A1-201ENST00000310483 UNC13BO14795 1591 aa20.6■□□□□ 0.89
SLC39A1-201ENST00000310483 RGS3P49796 1198 aa20.6■□□□□ 0.89
SLC39A1-201ENST00000310483 CCDC146Q8IYE0 955 aa20.59■□□□□ 0.89
SLC39A1-201ENST00000310483 WDR7Q9Y4E6 1490 aa20.59■□□□□ 0.89
SLC39A1-201ENST00000310483 KNSTRNQ9Y448 316 aa20.58■□□□□ 0.89
SLC39A1-201ENST00000310483 FAM161AQ3B820 660 aa20.58■□□□□ 0.88
SLC39A1-201ENST00000310483 ZNF521Q96K83 1311 aa20.58■□□□□ 0.88
SLC39A1-201ENST00000310483 GSE1Q14687 1217 aa20.57■□□□□ 0.88
SLC39A1-201ENST00000310483 GOLGA2Q08379 1002 aa20.57■□□□□ 0.88
SLC39A1-201ENST00000310483 EIF2AK4Q9P2K8 1649 aaKnown RBP20.56■□□□□ 0.88
SLC39A1-201ENST00000310483 AMER1Q5JTC6 1135 aaPredicted RBP20.56■□□□□ 0.88
SLC39A1-201ENST00000310483 SPINK5Q9NQ38 1064 aaPredicted RBP20.56■□□□□ 0.88
SLC39A1-201ENST00000310483 DAXXQ9UER7 740 aaPredicted RBP20.56■□□□□ 0.88
SLC39A1-201ENST00000310483 FRAT1Q92837 279 aaPredicted RBP20.55■□□□□ 0.88
SLC39A1-201ENST00000310483 RSPH4AQ5TD94 716 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms