RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 AQRO60306 1485 aaKnown RBP eCLIP12.49□□□□□ -0.413e-7■■■□□ 15.5
TMOD3-201ENST00000308580 BCL2L13Q9BXK5 485 aa12.49□□□□□ -0.41
TMOD3-201ENST00000308580 UACAQ9BZF9 1416 aa12.49□□□□□ -0.41
TMOD3-201ENST00000308580 GOLGA6L4A6NEF3 574 aa12.49□□□□□ -0.41
TMOD3-201ENST00000308580 CSB-PGBD3P0DP91 1061 aa12.49□□□□□ -0.41
TMOD3-201ENST00000308580 EXOC6Q8TAG9 804 aa12.49□□□□□ -0.41
TMOD3-201ENST00000308580 ARAP1Q96P48 1450 aa12.49□□□□□ -0.41
TMOD3-201ENST00000308580 VGFO15240 615 aaPredicted RBP12.49□□□□□ -0.41
TMOD3-201ENST00000308580 EID1Q9Y6B2 187 aa12.48□□□□□ -0.41
TMOD3-201ENST00000308580 KIF7Q2M1P5 1343 aa12.48□□□□□ -0.41
TMOD3-201ENST00000308580 APAF1O14727 1248 aa12.48□□□□□ -0.41
TMOD3-201ENST00000308580 SLC4A10Q6U841 1118 aa12.47□□□□□ -0.41
TMOD3-201ENST00000308580 RRP1P56182 461 aaKnown RBP12.47□□□□□ -0.41
TMOD3-201ENST00000308580 KIAA1211Q6ZU35 1233 aa12.47□□□□□ -0.41
TMOD3-201ENST00000308580 ELL2O00472 640 aaPredicted RBP12.47□□□□□ -0.41
TMOD3-201ENST00000308580 CCDC7Q96M83 1385 aa12.46□□□□□ -0.41
TMOD3-201ENST00000308580 AMPHP49418 695 aa12.46□□□□□ -0.41
TMOD3-201ENST00000308580 LTV1Q96GA3 475 aaPredicted RBP12.46□□□□□ -0.41
TMOD3-201ENST00000308580 L1TD1Q5T7N2 865 aaKnown RBP12.46□□□□□ -0.41
TMOD3-201ENST00000308580 CGNL1Q0VF96 1302 aa12.46□□□□□ -0.42
TMOD3-201ENST00000308580 GZF1Q9H116 711 aaPredicted RBP12.46□□□□□ -0.42
TMOD3-201ENST00000308580 ZNF330Q9Y3S2 320 aaPredicted RBP12.46□□□□□ -0.42
TMOD3-201ENST00000308580 CASKIN1Q8WXD9 1431 aa12.46□□□□□ -0.42
TMOD3-201ENST00000308580 MINK1Q8N4C8 1332 aaPredicted RBP12.45□□□□□ -0.42
TMOD3-201ENST00000308580 LMOD3Q0VAK6 560 aa12.45□□□□□ -0.42
TMOD3-201ENST00000308580 NCOA2Q15596 1464 aa12.45□□□□□ -0.42
TMOD3-201ENST00000308580 EVC2Q86UK5 1308 aa12.45□□□□□ -0.42
TMOD3-201ENST00000308580 E9PSI1 815 aa12.44□□□□□ -0.42
TMOD3-201ENST00000308580 CRBNQ96SW2 442 aa12.44□□□□□ -0.42
TMOD3-201ENST00000308580 CYB5RLQ6IPT4 315 aa12.44□□□□□ -0.42
TMOD3-201ENST00000308580 HMMRO75330 724 aa12.44□□□□□ -0.42
TMOD3-201ENST00000308580 ANKRD50Q9ULJ7 1429 aa12.44□□□□□ -0.42
TMOD3-201ENST00000308580 GBP4Q96PP9 640 aa12.44□□□□□ -0.42
TMOD3-201ENST00000308580 SYNJ1O43426 1573 aa12.43□□□□□ -0.42
TMOD3-201ENST00000308580 CUX1P39880 1505 aa12.43□□□□□ -0.42
TMOD3-201ENST00000308580 PDE4AP27815 886 aa12.43□□□□□ -0.42
TMOD3-201ENST00000308580 COG6Q9Y2V7 657 aa12.43□□□□□ -0.42
TMOD3-201ENST00000308580 CHMP4AQ9BY43 222 aa12.42□□□□□ -0.42
TMOD3-201ENST00000308580 CENPQQ7L2Z9 268 aaPredicted RBP12.42□□□□□ -0.42
TMOD3-201ENST00000308580 WASHC2AQ641Q2 1341 aa12.42□□□□□ -0.42
TMOD3-201ENST00000308580 CFTRP13569 1480 aa12.41□□□□□ -0.42
TMOD3-201ENST00000308580 TRIM6-TRIM34B2RNG4 842 aa12.41□□□□□ -0.42
TMOD3-201ENST00000308580 FYCO1Q9BQS8 1478 aa12.41□□□□□ -0.42
TMOD3-201ENST00000308580 RRBP1Q9P2E9 1410 aaKnown RBP12.4□□□□□ -0.42
TMOD3-201ENST00000308580 ZKSCAN2Q63HK3 967 aa12.4□□□□□ -0.42
TMOD3-201ENST00000308580 COG3Q96JB2 828 aa12.4□□□□□ -0.42
TMOD3-201ENST00000308580 ERICH3Q5RHP9 1530 aa12.4□□□□□ -0.42
TMOD3-201ENST00000308580 OSCARQ8IYS5 282 aa12.4□□□□□ -0.42
TMOD3-201ENST00000308580 FOXD4L1Q9NU39 408 aa12.39□□□□□ -0.43
TMOD3-201ENST00000308580 PRXQ9BXM0 1461 aa12.39□□□□□ -0.43
TMOD3-201ENST00000308580 CNTLNQ9NXG0 1405 aa12.39□□□□□ -0.43
TMOD3-201ENST00000308580 TULP1O00294 542 aaPredicted RBP12.38□□□□□ -0.43
TMOD3-201ENST00000308580 FAM161AQ3B820 660 aa12.38□□□□□ -0.43
TMOD3-201ENST00000308580 SLC4A3P48751 1232 aa12.38□□□□□ -0.43
TMOD3-201ENST00000308580 MSNP26038 577 aaKnown RBP12.38□□□□□ -0.43
TMOD3-201ENST00000308580 AFAP1Q8N556 730 aa12.38□□□□□ -0.43
TMOD3-201ENST00000308580 GOLGA6L6A8MZA4 724 aa12.37□□□□□ -0.43
TMOD3-201ENST00000308580 CHMP3Q9Y3E7 222 aa12.37□□□□□ -0.43
TMOD3-201ENST00000308580 NRDCO43847 1150 aa12.37□□□□□ -0.43
TMOD3-201ENST00000308580 HDAC5Q9UQL6 1122 aa12.37□□□□□ -0.43
TMOD3-201ENST00000308580 NOL8Q76FK4 1167 aaKnown RBP12.36□□□□□ -0.43
TMOD3-201ENST00000308580 DIAPH1O60610 1272 aaKnown RBP12.36□□□□□ -0.43
TMOD3-201ENST00000308580 ANKRD45Q5TZF3 282 aa12.36□□□□□ -0.43
TMOD3-201ENST00000308580 GRIN2BQ13224 1484 aa12.36□□□□□ -0.43
TMOD3-201ENST00000308580 NESP48681 1621 aa12.35□□□□□ -0.43
TMOD3-201ENST00000308580 STAC3Q96MF2 364 aa12.35□□□□□ -0.43
TMOD3-201ENST00000308580 GORABQ5T7V8 394 aa12.35□□□□□ -0.43
TMOD3-201ENST00000308580 TMEM132EQ6IEE7 984 aa12.34□□□□□ -0.43
TMOD3-201ENST00000308580 RIPK4P57078 832 aa12.34□□□□□ -0.43
TMOD3-201ENST00000308580 PTMSP20962 102 aa12.34□□□□□ -0.43
TMOD3-201ENST00000308580 NGEFQ8N5V2 710 aa12.34□□□□□ -0.43
TMOD3-201ENST00000308580 DRC7Q8IY82 874 aa12.34□□□□□ -0.43
TMOD3-201ENST00000308580 GPATCH3Q96I76 525 aa12.34□□□□□ -0.43
TMOD3-201ENST00000308580 GNL2Q13823 731 aaKnown RBP12.33□□□□□ -0.43
TMOD3-201ENST00000308580 MIA2Q96PC5 1412 aa12.33□□□□□ -0.44
TMOD3-201ENST00000308580 NBPF8Q3BBV2 869 aa12.33□□□□□ -0.44
TMOD3-201ENST00000308580 CFAP70Q5T0N1 1121 aa12.33□□□□□ -0.44
TMOD3-201ENST00000308580 NBPF1Q3BBV0 1214 aa12.32□□□□□ -0.44
TMOD3-201ENST00000308580 GGNBP2Q9H3C7 697 aa12.32□□□□□ -0.44
TMOD3-201ENST00000308580 RUNDC1Q96C34 613 aa12.32□□□□□ -0.44
TMOD3-201ENST00000308580 GOLGA6L3A6NEY3 463 aa12.32□□□□□ -0.44
TMOD3-201ENST00000308580 ADAMTS8Q9UP79 889 aa12.32□□□□□ -0.44
TMOD3-201ENST00000308580 DZIP1LQ8IYY4 767 aaKnown RBP12.32□□□□□ -0.44
TMOD3-201ENST00000308580 TAF7LQ5H9L4 462 aa12.31□□□□□ -0.44
TMOD3-201ENST00000308580 PRDM2Q13029 1718 aa12.31□□□□□ -0.44
TMOD3-201ENST00000308580 CHAF1AQ13111 956 aaPredicted RBP12.31□□□□□ -0.44
TMOD3-201ENST00000308580 DDX19BQ9UMR2 479 aa12.31□□□□□ -0.44
TMOD3-201ENST00000308580 ST18O60284 1047 aa12.3□□□□□ -0.44
TMOD3-201ENST00000308580 FAM69CQ0P6D2 419 aa12.3□□□□□ -0.44
TMOD3-201ENST00000308580 CABP2Q9NPB3 220 aa12.3□□□□□ -0.44
TMOD3-201ENST00000308580 TEFQ10587 303 aa12.3□□□□□ -0.44
TMOD3-201ENST00000308580 CDCA7LQ96GN5 454 aa12.3□□□□□ -0.44
TMOD3-201ENST00000308580 ISY1Q9ULR0 285 aaKnown RBP12.29□□□□□ -0.44
TMOD3-201ENST00000308580 BRD4O60885 1362 aaPredicted RBP12.29□□□□□ -0.44
TMOD3-201ENST00000308580 SYAP1Q96A49 352 aaPredicted RBP12.29□□□□□ -0.44
TMOD3-201ENST00000308580 RILPL2Q969X0 211 aa12.29□□□□□ -0.44
TMOD3-201ENST00000308580 FOXD4L5Q5VV16 416 aaPredicted RBP12.29□□□□□ -0.44
TMOD3-201ENST00000308580 FOXD4L4Q8WXT5 416 aaPredicted RBP12.29□□□□□ -0.44
TMOD3-201ENST00000308580 POLA1P09884 1462 aaPredicted RBP12.29□□□□□ -0.44
TMOD3-201ENST00000308580 PRG4Q92954 1404 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms