RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 CENPQQ7L2Z9 268 aaPredicted RBP16.99■□□□□ 0.31
DDX54-201ENST00000306014 CDCA7LQ96GN5 454 aa16.98■□□□□ 0.31
DDX54-201ENST00000306014 KANK1Q14678 1352 aa16.98■□□□□ 0.31
DDX54-201ENST00000306014 PCF11O94913 1555 aaKnown RBP16.97■□□□□ 0.31
DDX54-201ENST00000306014 HSP90AB1P08238 724 aaKnown RBP16.97■□□□□ 0.31
DDX54-201ENST00000306014 U2AF1L5P0DN76 240 aaPredicted RBP16.97■□□□□ 0.31
DDX54-201ENST00000306014 U2AF1Q01081 240 aaKnown RBP eCLIP16.97■□□□□ 0.31
DDX54-201ENST00000306014 MLECQ14165 292 aa16.97■□□□□ 0.31
DDX54-201ENST00000306014 MAPKBP1O60336 1514 aa16.97■□□□□ 0.31
DDX54-201ENST00000306014 FAM161AQ3B820 660 aa16.97■□□□□ 0.31
DDX54-201ENST00000306014 BIVM-ERCC5R4GMW8 1640 aa16.97■□□□□ 0.31
DDX54-201ENST00000306014 HSCBQ8IWL3 235 aa16.96■□□□□ 0.31
DDX54-201ENST00000306014 GZF1Q9H116 711 aaPredicted RBP16.96■□□□□ 0.31
DDX54-201ENST00000306014 POGKQ9P215 609 aa16.96■□□□□ 0.31
DDX54-201ENST00000306014 PNISRQ8TF01 805 aaKnown RBP16.96■□□□□ 0.31
DDX54-201ENST00000306014 CENPJQ9HC77 1338 aaPredicted RBP16.95■□□□□ 0.3
DDX54-201ENST00000306014 SPAG9O60271 1321 aaKnown RBP16.95■□□□□ 0.3
DDX54-201ENST00000306014 KIAA0586Q9BVV6 1533 aa16.95■□□□□ 0.3
DDX54-201ENST00000306014 ANKRD50Q9ULJ7 1429 aa16.94■□□□□ 0.3
DDX54-201ENST00000306014 L1TD1Q5T7N2 865 aaKnown RBP16.94■□□□□ 0.3
DDX54-201ENST00000306014 RWDD1Q9H446 243 aaPredicted RBP16.94■□□□□ 0.3
DDX54-201ENST00000306014 APAF1O14727 1248 aa16.93■□□□□ 0.3
DDX54-201ENST00000306014 SRPK2P78362 688 aaKnown RBP16.93■□□□□ 0.3
DDX54-201ENST00000306014 RRP7AQ9Y3A4 280 aaKnown RBP16.93■□□□□ 0.3
DDX54-201ENST00000306014 GSE1Q14687 1217 aa16.93■□□□□ 0.3
DDX54-201ENST00000306014 MAP3K1Q13233 1512 aa16.93■□□□□ 0.3
DDX54-201ENST00000306014 SYNJ2O15056 1496 aa16.93■□□□□ 0.3
DDX54-201ENST00000306014 BRD4O60885 1362 aaPredicted RBP16.93■□□□□ 0.3
DDX54-201ENST00000306014 PRDM2Q13029 1718 aa16.92■□□□□ 0.3
DDX54-201ENST00000306014 KIF3BO15066 747 aa16.91■□□□□ 0.3
DDX54-201ENST00000306014 MAGI1Q96QZ7 1491 aaPredicted RBP16.91■□□□□ 0.3
DDX54-201ENST00000306014 EHBP1L1Q8N3D4 1523 aa16.91■□□□□ 0.3
DDX54-201ENST00000306014 BCL2L13Q9BXK5 485 aa16.91■□□□□ 0.3
DDX54-201ENST00000306014 PMFBP1Q8TBY8 1022 aa16.91■□□□□ 0.3
DDX54-201ENST00000306014 ITPRIPQ8IWB1 547 aa16.9■□□□□ 0.3
DDX54-201ENST00000306014 COG6Q9Y2V7 657 aa16.9■□□□□ 0.3
DDX54-201ENST00000306014 MFAP1P55081 439 aaKnown RBP16.89■□□□□ 0.3
DDX54-201ENST00000306014 STK26Q9P289 416 aa16.89■□□□□ 0.3
DDX54-201ENST00000306014 SMG6Q86US8 1419 aaKnown RBP16.89■□□□□ 0.29
DDX54-201ENST00000306014 EIF3AQ14152 1382 aaKnown RBP16.89■□□□□ 0.29
DDX54-201ENST00000306014 GRIN2AQ12879 1464 aa16.88■□□□□ 0.29
DDX54-201ENST00000306014 CUL7Q14999 1698 aa16.88■□□□□ 0.29
DDX54-201ENST00000306014 ADAMTS8Q9UP79 889 aa16.88■□□□□ 0.29
DDX54-201ENST00000306014 MIA2Q96PC5 1412 aa16.88■□□□□ 0.29
DDX54-201ENST00000306014 NBPF1Q3BBV0 1214 aa16.87■□□□□ 0.29
DDX54-201ENST00000306014 TPRNQ4KMQ1 711 aa16.87■□□□□ 0.29
DDX54-201ENST00000306014 SMC4Q9NTJ3 1288 aa16.87■□□□□ 0.29
DDX54-201ENST00000306014 E9PSI1 815 aa16.86■□□□□ 0.29
DDX54-201ENST00000306014 CASC1Q6TDU7 716 aa16.86■□□□□ 0.29
DDX54-201ENST00000306014 CHMP4BQ9H444 224 aaKnown RBP16.85■□□□□ 0.29
DDX54-201ENST00000306014 TRAK1Q9UPV9 953 aa16.85■□□□□ 0.29
DDX54-201ENST00000306014 FAM69CQ0P6D2 419 aa16.84■□□□□ 0.29
DDX54-201ENST00000306014 KIAA1107Q9UPP5 1409 aa16.84■□□□□ 0.29
DDX54-201ENST00000306014 SUPT6HQ7KZ85 1726 aaKnown RBP16.84■□□□□ 0.29
DDX54-201ENST00000306014 PNNQ9H307 717 aaKnown RBP16.84■□□□□ 0.29
DDX54-201ENST00000306014 IQGAP2Q13576 1575 aa16.84■□□□□ 0.29
DDX54-201ENST00000306014 IPO8O15397 1037 aaKnown RBP16.83■□□□□ 0.28
DDX54-201ENST00000306014 NFKBIBQ15653 356 aa16.83■□□□□ 0.28
DDX54-201ENST00000306014 DAPK1P53355 1430 aa16.82■□□□□ 0.28
DDX54-201ENST00000306014 CGNL1Q0VF96 1302 aa16.82■□□□□ 0.28
DDX54-201ENST00000306014 NUTM2DQ5VT03 806 aaPredicted RBP16.82■□□□□ 0.28
DDX54-201ENST00000306014 BACH2Q9BYV9 841 aa16.82■□□□□ 0.28
DDX54-201ENST00000306014 ANKRD30BQ9BXX2 1392 aa16.82■□□□□ 0.28
DDX54-201ENST00000306014 PTMAP06454 111 aaKnown RBP16.82■□□□□ 0.28
DDX54-201ENST00000306014 PTPRKQ15262 1439 aa16.8■□□□□ 0.28
DDX54-201ENST00000306014 CDK13Q14004 1512 aaKnown RBP16.8■□□□□ 0.28
DDX54-201ENST00000306014 GOLGA6L3A6NEY3 463 aa16.8■□□□□ 0.28
DDX54-201ENST00000306014 APBB1O00213 710 aa16.8■□□□□ 0.28
DDX54-201ENST00000306014 NCOA1Q15788 1441 aa16.79■□□□□ 0.28
DDX54-201ENST00000306014 PLEKHG5O94827 1062 aa16.78■□□□□ 0.28
DDX54-201ENST00000306014 KIF21AQ7Z4S6 1674 aa16.78■□□□□ 0.28
DDX54-201ENST00000306014 EPRSP07814 1512 aaKnown RBP16.77■□□□□ 0.28
DDX54-201ENST00000306014 PTPN23Q9H3S7 1636 aa16.77■□□□□ 0.28
DDX54-201ENST00000306014 IL27Q8NEV9 243 aa16.77■□□□□ 0.27
DDX54-201ENST00000306014 GBP4Q96PP9 640 aa16.77■□□□□ 0.27
DDX54-201ENST00000306014 WASHC2CQ9Y4E1 1318 aa16.76■□□□□ 0.27
DDX54-201ENST00000306014 PANK1Q8TE04 598 aa16.76■□□□□ 0.27
DDX54-201ENST00000306014 FOXD4L1Q9NU39 408 aa16.76■□□□□ 0.27
DDX54-201ENST00000306014 DNTTIP2Q5QJE6 756 aaKnown RBP16.75■□□□□ 0.27
DDX54-201ENST00000306014 C14orf37Q86TY3 774 aa16.75■□□□□ 0.27
DDX54-201ENST00000306014 SKAP1Q86WV1 359 aa16.75■□□□□ 0.27
DDX54-201ENST00000306014 SOX12O15370 315 aa16.75■□□□□ 0.27
DDX54-201ENST00000306014 PPP2R1AP30153 589 aa16.75■□□□□ 0.27
DDX54-201ENST00000306014 ZBTB7CA1YPR0 619 aa16.74■□□□□ 0.27
DDX54-201ENST00000306014 HDGFL2Q7Z4V5 671 aaPredicted RBP16.74■□□□□ 0.27
DDX54-201ENST00000306014 HECW1Q76N89 1606 aa16.74■□□□□ 0.27
DDX54-201ENST00000306014 ROCK1Q13464 1354 aa16.73■□□□□ 0.27
DDX54-201ENST00000306014 TROQ12816 1431 aaPredicted RBP16.72■□□□□ 0.27
DDX54-201ENST00000306014 ZKSCAN2Q63HK3 967 aa16.72■□□□□ 0.27
DDX54-201ENST00000306014 C9orf84Q5VXU9 1444 aa16.71■□□□□ 0.27
DDX54-201ENST00000306014 PLCB2Q00722 1185 aa16.71■□□□□ 0.27
DDX54-201ENST00000306014 BRPF3Q9ULD4 1205 aa16.71■□□□□ 0.27
DDX54-201ENST00000306014 HDGFP51858 240 aaKnown RBP16.7■□□□□ 0.26
DDX54-201ENST00000306014 FRAT2O75474 233 aaPredicted RBP16.7■□□□□ 0.26
DDX54-201ENST00000306014 ABCC5O15440 1437 aa16.7■□□□□ 0.26
DDX54-201ENST00000306014 MSNP26038 577 aaKnown RBP16.7■□□□□ 0.26
DDX54-201ENST00000306014 AFAP1Q8N556 730 aa16.7■□□□□ 0.26
DDX54-201ENST00000306014 RPRD2Q5VT52 1461 aaKnown RBP16.69■□□□□ 0.26
DDX54-201ENST00000306014 PLB1Q6P1J6 1458 aa16.69■□□□□ 0.26
DDX54-201ENST00000306014 BCAR3O75815 825 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms