RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 MROH1Q8NDA8 1641 aa40.52■■■■■ 4.08
HDAC3-201ENST00000305264 ARID4BQ4LE39 1312 aaPredicted RBP40.49■■■■■ 4.07
HDAC3-201ENST00000305264 PRDM15P57071 1507 aaPredicted RBP40.46■■■■■ 4.07
HDAC3-201ENST00000305264 GGT6Q6P531 493 aa40.43■■■■■ 4.06
HDAC3-201ENST00000305264 MLECQ14165 292 aa40.4■■■■■ 4.06
HDAC3-201ENST00000305264 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.4■■■■■ 4.064e-9■■□□□ 11.7
HDAC3-201ENST00000305264 HRCP23327 699 aa40.39■■■■■ 4.06
HDAC3-201ENST00000305264 KDM5DQ9BY66 1539 aa40.36■■■■■ 4.05
HDAC3-201ENST00000305264 TRIM52Q96A61 297 aa40.36■■■■■ 4.05
HDAC3-201ENST00000305264 VWDEQ8N2E2 1590 aa40.36■■■■■ 4.05
HDAC3-201ENST00000305264 NUP155O75694 1391 aa40.35■■■■■ 4.05
HDAC3-201ENST00000305264 IQGAP3Q86VI3 1631 aa40.34■■■■■ 4.05
HDAC3-201ENST00000305264 CEP152O94986 1710 aa40.32■■■■■ 4.05
HDAC3-201ENST00000305264 FAM135AQ9P2D6 1515 aa40.3■■■■■ 4.04
HDAC3-201ENST00000305264 PZPP20742 1482 aa40.29■■■■■ 4.04
HDAC3-201ENST00000305264 KANK1Q14678 1352 aa40.29■■■■■ 4.04
HDAC3-201ENST00000305264 ABCC3O15438 1527 aa40.28■■■■■ 4.04
HDAC3-201ENST00000305264 ZC3H13Q5T200 1668 aaKnown RBP40.27■■■■■ 4.04
HDAC3-201ENST00000305264 ACIN1Q9UKV3 1341 aaKnown RBP40.25■■■■■ 4.03
HDAC3-201ENST00000305264 FER1L4A9Z1Z3 1794 aa40.24■■■■■ 4.03
HDAC3-201ENST00000305264 CLTCQ00610 1675 aaKnown RBP40.24■■■■■ 4.03
HDAC3-201ENST00000305264 WASHC2CQ9Y4E1 1318 aa40.22■■■■■ 4.03
HDAC3-201ENST00000305264 ADAMTSL3P82987 1691 aa40.21■■■■■ 4.03
HDAC3-201ENST00000305264 LMTK2Q8IWU2 1503 aa40.21■■■■■ 4.03
HDAC3-201ENST00000305264 TET3O43151 1660 aa40.2■■■■■ 4.03
HDAC3-201ENST00000305264 PPP6R1Q9UPN7 881 aa40.19■■■■■ 4.02
HDAC3-201ENST00000305264 MADDQ8WXG6 1647 aa40.19■■■■■ 4.02
HDAC3-201ENST00000305264 CAMSAP1Q5T5Y3 1602 aa40.18■■■■■ 4.02
HDAC3-201ENST00000305264 SLC4A1APQ9BWU0 796 aaKnown RBP40.15■■■■■ 4.02
HDAC3-201ENST00000305264 EFCAB6Q5THR3 1501 aa40.15■■■■■ 4.02
HDAC3-201ENST00000305264 MPHOSPH9Q99550 1183 aa40.14■■■■■ 4.02
HDAC3-201ENST00000305264 E9PCH4 1651 aa40.11■■■■■ 4.01
HDAC3-201ENST00000305264 DHX57Q6P158 1386 aaKnown RBP40.1■■■■■ 4.01
HDAC3-201ENST00000305264 RIMS1Q86UR5 1692 aaKnown RBP40.1■■■■■ 4.01
HDAC3-201ENST00000305264 ESF1Q9H501 851 aaKnown RBP40.1■■■■■ 4.01
HDAC3-201ENST00000305264 CNTLNQ9NXG0 1405 aa40.09■■■■■ 4.01
HDAC3-201ENST00000305264 MROH2AA6NES4 1674 aa40.09■■■■■ 4.01
HDAC3-201ENST00000305264 PKD2Q13563 968 aa40.04■■■■■ 4
HDAC3-201ENST00000305264 NPATQ14207 1427 aa40.03■■■■■ 4
HDAC3-201ENST00000305264 FOXD1Q16676 465 aa40.01■■■■■ 4
HDAC3-201ENST00000305264 ARHGAP31Q2M1Z3 1444 aa40.01■■■■□ 3.99
HDAC3-201ENST00000305264 ZMYM3Q14202 1370 aa39.99■■■■□ 3.99
HDAC3-201ENST00000305264 C3P01024 1663 aa39.99■■■■□ 3.99
HDAC3-201ENST00000305264 CFAP65Q6ZU64 1925 aaKnown RBP39.98■■■■□ 3.99
HDAC3-201ENST00000305264 RPRD2Q5VT52 1461 aaKnown RBP39.97■■■■□ 3.99
HDAC3-201ENST00000305264 PREX1Q8TCU6 1659 aa39.92■■■■□ 3.98
HDAC3-201ENST00000305264 KDM4FA0A1W2PPD8 638 aa39.92■■■■□ 3.98
HDAC3-201ENST00000305264 SPHKAPQ2M3C7 1700 aa39.9■■■■□ 3.98
HDAC3-201ENST00000305264 CEBPAP49715 358 aaPredicted RBP39.88■■■■□ 3.98
HDAC3-201ENST00000305264 PTPRMP28827 1452 aa39.87■■■■□ 3.97
HDAC3-201ENST00000305264 ERVK-7P63135 1459 aa39.87■■■■□ 3.97
HDAC3-201ENST00000305264 FBXO31Q5XUX0 539 aaPredicted RBP39.86■■■■□ 3.97
HDAC3-201ENST00000305264 PLA2R1Q13018 1463 aa39.85■■■■□ 3.97
HDAC3-201ENST00000305264 PLPPR3Q6T4P5 718 aa39.84■■■■□ 3.97
HDAC3-201ENST00000305264 SPATA31D1Q6ZQQ2 1576 aa39.84■■■■□ 3.97
HDAC3-201ENST00000305264 PTPRTO14522 1441 aa39.83■■■■□ 3.97
HDAC3-201ENST00000305264 NOS1P29475 1434 aa39.83■■■■□ 3.97
HDAC3-201ENST00000305264 SYNMO15061 1565 aa39.82■■■■□ 3.96
HDAC3-201ENST00000305264 ANKRD30BQ9BXX2 1392 aa39.81■■■■□ 3.96
HDAC3-201ENST00000305264 CCER1Q8TC90 406 aaPredicted RBP39.81■■■■□ 3.96
HDAC3-201ENST00000305264 TRPM2O94759 1503 aa39.81■■■■□ 3.96
HDAC3-201ENST00000305264 UGGT1Q9NYU2 1555 aa39.76■■■■□ 3.96
HDAC3-201ENST00000305264 CLTCL1P53675 1640 aa39.72■■■■□ 3.95
HDAC3-201ENST00000305264 PIK3C2BO00750 1634 aa39.7■■■■□ 3.95
HDAC3-201ENST00000305264 TNRQ92752 1358 aa39.69■■■■□ 3.94
HDAC3-201ENST00000305264 CCDC144AA2RUR9 1427 aa39.66■■■■□ 3.94
HDAC3-201ENST00000305264 CLSPNQ9HAW4 1339 aa39.62■■■■□ 3.93
HDAC3-201ENST00000305264 MYO3AQ8NEV4 1616 aa39.62■■■■□ 3.93
HDAC3-201ENST00000305264 SIN3AQ96ST3 1273 aa39.61■■■■□ 3.93
HDAC3-201ENST00000305264 IDI1Q13907 227 aa39.57■■■■□ 3.92
HDAC3-201ENST00000305264 SLC52A1Q9NWF4 448 aa39.57■■■■□ 3.92
HDAC3-201ENST00000305264 SETD1BQ9UPS6 1966 aaKnown RBP39.56■■■■□ 3.92
HDAC3-201ENST00000305264 KIF1BO60333 1816 aa39.54■■■■□ 3.92
HDAC3-201ENST00000305264 NLRP1Q9C000 1473 aa39.54■■■■□ 3.92
HDAC3-201ENST00000305264 NEUROD1Q13562 356 aa39.51■■■■□ 3.92
HDAC3-201ENST00000305264 MYO5BQ9ULV0 1848 aa39.49■■■■□ 3.91
HDAC3-201ENST00000305264 ADGRB3O60242 1522 aa39.48■■■■□ 3.91
HDAC3-201ENST00000305264 TMEM131LA2VDJ0 1609 aa39.48■■■■□ 3.91
HDAC3-201ENST00000305264 CEP170BQ9Y4F5 1589 aaPredicted RBP39.47■■■■□ 3.91
HDAC3-201ENST00000305264 ZNF142P52746 1687 aaPredicted RBP39.47■■■■□ 3.91
HDAC3-201ENST00000305264 UBR1Q8IWV7 1749 aa39.45■■■■□ 3.91
HDAC3-201ENST00000305264 SPATA31E1Q6ZUB1 1445 aa39.45■■■■□ 3.91
HDAC3-201ENST00000305264 A2ML1A8K2U0 1454 aa39.44■■■■□ 3.9
HDAC3-201ENST00000305264 CHGAP10645 457 aaKnown RBP39.42■■■■□ 3.9
HDAC3-201ENST00000305264 KDM5AP29375 1690 aaKnown RBP39.42■■■■□ 3.9
HDAC3-201ENST00000305264 UHRF1BP1Q6BDS2 1440 aa39.42■■■■□ 3.9
HDAC3-201ENST00000305264 NEURL4Q96JN8 1562 aa39.4■■■■□ 3.9
HDAC3-201ENST00000305264 STAG3Q9UJ98 1225 aa39.36■■■■□ 3.89
HDAC3-201ENST00000305264 RGL3Q3MIN7 710 aa39.35■■■■□ 3.89
HDAC3-201ENST00000305264 TONSLQ96HA7 1378 aa39.29■■■■□ 3.88
HDAC3-201ENST00000305264 ZNF326Q5BKZ1 582 aaKnown RBP39.28■■■■□ 3.88
HDAC3-201ENST00000305264 IFT172Q9UG01 1749 aa39.27■■■■□ 3.88
HDAC3-201ENST00000305264 LMTK3Q96Q04 1460 aa39.26■■■■□ 3.88
HDAC3-201ENST00000305264 NEXMIFQ5QGS0 1516 aa39.25■■■■□ 3.87
HDAC3-201ENST00000305264 PPLO60437 1756 aa39.25■■■■□ 3.87
HDAC3-201ENST00000305264 L3MBTL2Q969R5 705 aa39.23■■■■□ 3.87
HDAC3-201ENST00000305264 THEMISQ8N1K5 641 aaPredicted RBP39.21■■■■□ 3.87
HDAC3-201ENST00000305264 TMEM2Q9UHN6 1383 aa39.2■■■■□ 3.87
HDAC3-201ENST00000305264 SLIT1O75093 1534 aa39.2■■■■□ 3.87
HDAC3-201ENST00000305264 ZFYVE9O95405 1425 aa39.19■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 540.3 ms