RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 CARMIL1Q5VZK9 1371 aa20.9■□□□□ 0.94
PDS5A-201ENST00000303538 CUX2O14529 1486 aa20.9■□□□□ 0.94
PDS5A-201ENST00000303538 CHMP4AQ9BY43 222 aa20.9■□□□□ 0.94
PDS5A-201ENST00000303538 NUP155O75694 1391 aa20.9■□□□□ 0.94
PDS5A-201ENST00000303538 TRAK1Q9UPV9 953 aa20.89■□□□□ 0.94
PDS5A-201ENST00000303538 HMMRO75330 724 aa20.89■□□□□ 0.93
PDS5A-201ENST00000303538 GBP4Q96PP9 640 aa20.88■□□□□ 0.93
PDS5A-201ENST00000303538 ELL2O00472 640 aaPredicted RBP20.87■□□□□ 0.93
PDS5A-201ENST00000303538 PIP4K2BP78356 416 aa20.87■□□□□ 0.93
PDS5A-201ENST00000303538 C1orf141Q5JVX7 400 aa20.87■□□□□ 0.93
PDS5A-201ENST00000303538 SF3A1Q15459 793 aaKnown RBP20.87■□□□□ 0.93
PDS5A-201ENST00000303538 HDAC5Q9UQL6 1122 aa20.86■□□□□ 0.93
PDS5A-201ENST00000303538 FHAD1B1AJZ9 1412 aa20.86■□□□□ 0.93
PDS5A-201ENST00000303538 CECR2Q9BXF3 1484 aa20.86■□□□□ 0.93
PDS5A-201ENST00000303538 CARMIL2Q6F5E8 1435 aa20.86■□□□□ 0.93
PDS5A-201ENST00000303538 RCAN3Q9UKA8 241 aa20.85■□□□□ 0.93
PDS5A-201ENST00000303538 NUTM2BA6NNL0 878 aaPredicted RBP20.84■□□□□ 0.93
PDS5A-201ENST00000303538 NUTM2EB1AL46 878 aaPredicted RBP20.84■□□□□ 0.93
PDS5A-201ENST00000303538 NUTM2AQ8IVF1 878 aaPredicted RBP20.84■□□□□ 0.93
PDS5A-201ENST00000303538 RRP7AQ9Y3A4 280 aaKnown RBP20.84■□□□□ 0.93
PDS5A-201ENST00000303538 RILPL2Q969X0 211 aa20.83■□□□□ 0.92
PDS5A-201ENST00000303538 TPD52L1Q16890 204 aaPredicted RBP20.82■□□□□ 0.92
PDS5A-201ENST00000303538 NOL10Q9BSC4 688 aaKnown RBP20.82■□□□□ 0.92
PDS5A-201ENST00000303538 NECTIN2Q92692 538 aa20.81■□□□□ 0.92
PDS5A-201ENST00000303538 AKAP17AQ02040 695 aaKnown RBP20.81■□□□□ 0.92
PDS5A-201ENST00000303538 EIF2S2P20042 333 aaKnown RBP20.81■□□□□ 0.92
PDS5A-201ENST00000303538 SYAP1Q96A49 352 aaPredicted RBP20.81■□□□□ 0.92
PDS5A-201ENST00000303538 FOXD4L6Q3SYB3 417 aaPredicted RBP20.8■□□□□ 0.92
PDS5A-201ENST00000303538 FOXD4L3Q6VB84 417 aaPredicted RBP20.8■□□□□ 0.92
PDS5A-201ENST00000303538 DHX16O60231 1041 aaKnown RBP20.8■□□□□ 0.92
PDS5A-201ENST00000303538 VPS37DQ86XT2 251 aa20.79■□□□□ 0.92
PDS5A-201ENST00000303538 KIF16BQ96L93 1317 aa20.79■□□□□ 0.92
PDS5A-201ENST00000303538 EIF3AQ14152 1382 aaKnown RBP20.78■□□□□ 0.92
PDS5A-201ENST00000303538 TTC5Q8N0Z6 440 aa20.78■□□□□ 0.92
PDS5A-201ENST00000303538 H3BQV1 296 aa20.78■□□□□ 0.92
PDS5A-201ENST00000303538 IFFO2Q5TF58 517 aa20.78■□□□□ 0.92
PDS5A-201ENST00000303538 PMFBP1Q8TBY8 1022 aa20.78■□□□□ 0.92
PDS5A-201ENST00000303538 MPHOSPH9Q99550 1183 aa20.78■□□□□ 0.92
PDS5A-201ENST00000303538 TNIKQ9UKE5 1360 aa20.78■□□□□ 0.92
PDS5A-201ENST00000303538 USP35Q9P2H5 1018 aa20.77■□□□□ 0.92
PDS5A-201ENST00000303538 TPM3P06753 285 aa20.77■□□□□ 0.91
PDS5A-201ENST00000303538 TEFQ10587 303 aa20.76■□□□□ 0.91
PDS5A-201ENST00000303538 SF3B2Q13435 895 aaKnown RBP20.76■□□□□ 0.91
PDS5A-201ENST00000303538 AMOTL1Q8IY63 956 aa20.76■□□□□ 0.91
PDS5A-201ENST00000303538 LMOD3Q0VAK6 560 aa20.76■□□□□ 0.91
PDS5A-201ENST00000303538 ARHGAP35Q9NRY4 1499 aa20.76■□□□□ 0.91
PDS5A-201ENST00000303538 APPP05067 770 aa20.75■□□□□ 0.91
PDS5A-201ENST00000303538 TDRD9Q8NDG6 1382 aaKnown RBP20.74■□□□□ 0.91
PDS5A-201ENST00000303538 GOLGA6L1Q8N7Z2 621 aa20.74■□□□□ 0.91
PDS5A-201ENST00000303538 PSME1Q06323 249 aa20.74■□□□□ 0.91
PDS5A-201ENST00000303538 FAM69CQ0P6D2 419 aa20.74■□□□□ 0.91
PDS5A-201ENST00000303538 FAM184AQ8NB25 1140 aa20.73■□□□□ 0.91
PDS5A-201ENST00000303538 NUTM2GQ5VZR2 741 aa20.73■□□□□ 0.91
PDS5A-201ENST00000303538 BCL2L13Q9BXK5 485 aa20.73■□□□□ 0.91
PDS5A-201ENST00000303538 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.72■□□□□ 0.91
PDS5A-201ENST00000303538 MCTP1Q6DN14 999 aa20.72■□□□□ 0.91
PDS5A-201ENST00000303538 SYNE3Q6ZMZ3 975 aa20.71■□□□□ 0.91
PDS5A-201ENST00000303538 COG3Q96JB2 828 aa20.71■□□□□ 0.91
PDS5A-201ENST00000303538 CSPP1Q1MSJ5 1256 aa20.71■□□□□ 0.91
PDS5A-201ENST00000303538 RALBP1Q15311 655 aa20.71■□□□□ 0.91
PDS5A-201ENST00000303538 ANKRD30AQ9BXX3 1397 aa20.7■□□□□ 0.9
PDS5A-201ENST00000303538 SETD5Q9C0A6 1442 aa20.7■□□□□ 0.9
PDS5A-201ENST00000303538 CENPJQ9HC77 1338 aaPredicted RBP20.69■□□□□ 0.9
PDS5A-201ENST00000303538 C9orf78Q9NZ63 289 aaPredicted RBP20.69■□□□□ 0.9
PDS5A-201ENST00000303538 ATF3P18847 181 aa20.69■□□□□ 0.9
PDS5A-201ENST00000303538 MYO15BQ96JP2 1530 aa20.69■□□□□ 0.9
PDS5A-201ENST00000303538 TSR1Q2NL82 804 aaKnown RBP20.68■□□□□ 0.9
PDS5A-201ENST00000303538 FAM177BA6PVY3 158 aa20.68■□□□□ 0.9
PDS5A-201ENST00000303538 NEXNQ0ZGT2 675 aa20.68■□□□□ 0.9
PDS5A-201ENST00000303538 KIF3AQ9Y496 699 aa20.68■□□□□ 0.9
PDS5A-201ENST00000303538 MINK1Q8N4C8 1332 aaPredicted RBP20.68■□□□□ 0.9
PDS5A-201ENST00000303538 CCAR2Q8N163 923 aaKnown RBP20.68■□□□□ 0.9
PDS5A-201ENST00000303538 PTMSP20962 102 aa20.68■□□□□ 0.9
PDS5A-201ENST00000303538 PCMTD1Q96MG8 357 aaPredicted RBP20.67■□□□□ 0.9
PDS5A-201ENST00000303538 ANKRD45Q5TZF3 282 aa20.66■□□□□ 0.9
PDS5A-201ENST00000303538 DEKP35659 375 aaKnown RBP20.65■□□□□ 0.9
PDS5A-201ENST00000303538 ST18O60284 1047 aa20.65■□□□□ 0.9
PDS5A-201ENST00000303538 SMARCA2P51531 1590 aa20.65■□□□□ 0.9
PDS5A-201ENST00000303538 FYB1O15117 783 aa20.65■□□□□ 0.9
PDS5A-201ENST00000303538 RBM33Q96EV2 1170 aaKnown RBP20.65■□□□□ 0.9
PDS5A-201ENST00000303538 CCDC43Q96MW1 224 aaKnown RBP20.65■□□□□ 0.9
PDS5A-201ENST00000303538 TCERG1O14776 1098 aaKnown RBP20.64■□□□□ 0.89
PDS5A-201ENST00000303538 KANK4Q5T7N3 995 aaPredicted RBP20.64■□□□□ 0.89
PDS5A-201ENST00000303538 CCDC180Q9P1Z9 1646 aa20.64■□□□□ 0.89
PDS5A-201ENST00000303538 SLC4A3P48751 1232 aa20.64■□□□□ 0.89
PDS5A-201ENST00000303538 OSCARQ8IYS5 282 aa20.63■□□□□ 0.89
PDS5A-201ENST00000303538 MTMR7Q9Y216 660 aa20.63■□□□□ 0.89
PDS5A-201ENST00000303538 SOGA1O94964 1423 aa20.63■□□□□ 0.89
PDS5A-201ENST00000303538 TPM2P07951 284 aa20.62■□□□□ 0.89
PDS5A-201ENST00000303538 PATL2C9JE40 543 aaKnown RBP20.62■□□□□ 0.89
PDS5A-201ENST00000303538 TNNT3P45378 269 aaPredicted RBP20.62■□□□□ 0.89
PDS5A-201ENST00000303538 PDS5BQ9NTI5 1447 aa20.61■□□□□ 0.89
PDS5A-201ENST00000303538 TRIM29Q14134 588 aa20.6■□□□□ 0.89
PDS5A-201ENST00000303538 DIAPH3Q9NSV4 1193 aa20.6■□□□□ 0.89
PDS5A-201ENST00000303538 STRN4Q9NRL3 753 aa20.59■□□□□ 0.89
PDS5A-201ENST00000303538 FOSBP53539 338 aa20.58■□□□□ 0.89
PDS5A-201ENST00000303538 CCER2I3L3R5 266 aa20.58■□□□□ 0.89
PDS5A-201ENST00000303538 NFXL1Q6ZNB6 911 aa20.58■□□□□ 0.88
PDS5A-201ENST00000303538 PLIN1O60240 522 aa20.57■□□□□ 0.88
PDS5A-201ENST00000303538 ZNF428Q96B54 188 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms