RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 UHRF1BP1Q6BDS2 1440 aa14.36□□□□□ -0.11
ZNF558-201ENST00000301475 KTN1Q86UP2 1357 aaKnown RBP14.36□□□□□ -0.11
ZNF558-201ENST00000301475 PDE3BQ13370 1112 aa14.36□□□□□ -0.11
ZNF558-201ENST00000301475 CARD11Q9BXL7 1154 aa14.35□□□□□ -0.11
ZNF558-201ENST00000301475 ST20-MTHFSA0A0A6YYL1 179 aa14.35□□□□□ -0.11
ZNF558-201ENST00000301475 JPH4Q96JJ6 628 aa14.34□□□□□ -0.11
ZNF558-201ENST00000301475 PKD2Q13563 968 aa14.33□□□□□ -0.11
ZNF558-201ENST00000301475 SYNJ2O15056 1496 aa14.33□□□□□ -0.11
ZNF558-201ENST00000301475 PARD3Q8TEW0 1356 aa14.33□□□□□ -0.12
ZNF558-201ENST00000301475 NLRP13Q86W25 1043 aa14.33□□□□□ -0.12
ZNF558-201ENST00000301475 EIF5BO60841 1220 aaKnown RBP14.33□□□□□ -0.12
ZNF558-201ENST00000301475 MAGI1Q96QZ7 1491 aaPredicted RBP14.33□□□□□ -0.12
ZNF558-201ENST00000301475 KIAA0586Q9BVV6 1533 aa14.32□□□□□ -0.12
ZNF558-201ENST00000301475 KDM2BQ8NHM5 1336 aa14.32□□□□□ -0.12
ZNF558-201ENST00000301475 C20orf194Q5TEA3 1177 aa14.32□□□□□ -0.12
ZNF558-201ENST00000301475 ADGBQ8N7X0 1667 aa14.32□□□□□ -0.12
ZNF558-201ENST00000301475 FRAT2O75474 233 aaPredicted RBP14.3□□□□□ -0.12
ZNF558-201ENST00000301475 ARHGEF12Q9NZN5 1544 aa14.29□□□□□ -0.12
ZNF558-201ENST00000301475 CAMSAP2Q08AD1 1489 aa14.29□□□□□ -0.12
ZNF558-201ENST00000301475 BLMP54132 1417 aaPredicted RBP14.29□□□□□ -0.12
ZNF558-201ENST00000301475 C8orf34Q49A92 452 aa14.29□□□□□ -0.12
ZNF558-201ENST00000301475 DCAF11Q8TEB1 546 aa14.28□□□□□ -0.12
ZNF558-201ENST00000301475 CEP170Q5SW79 1584 aa14.27□□□□□ -0.12
ZNF558-201ENST00000301475 CROCC2H7BZ55 1655 aa14.26□□□□□ -0.13
ZNF558-201ENST00000301475 ADGRL2O95490 1459 aa14.26□□□□□ -0.13
ZNF558-201ENST00000301475 DAXXQ9UER7 740 aaPredicted RBP14.26□□□□□ -0.13
ZNF558-201ENST00000301475 DISP1Q96F81 1524 aa14.26□□□□□ -0.13
ZNF558-201ENST00000301475 NUP153P49790 1475 aaKnown RBP14.26□□□□□ -0.13
ZNF558-201ENST00000301475 FAM161AQ3B820 660 aa14.25□□□□□ -0.13
ZNF558-201ENST00000301475 KDM2AQ9Y2K7 1162 aa14.25□□□□□ -0.13
ZNF558-201ENST00000301475 PER1O15534 1290 aaPredicted RBP14.25□□□□□ -0.13
ZNF558-201ENST00000301475 ZMYM4Q5VZL5 1548 aa14.24□□□□□ -0.13
ZNF558-201ENST00000301475 CENPQQ7L2Z9 268 aaPredicted RBP14.23□□□□□ -0.13
ZNF558-201ENST00000301475 FAM43AQ8N2R8 423 aa14.23□□□□□ -0.13
ZNF558-201ENST00000301475 ANKRD50Q9ULJ7 1429 aa14.23□□□□□ -0.13
ZNF558-201ENST00000301475 PLB1Q6P1J6 1458 aa14.22□□□□□ -0.13
ZNF558-201ENST00000301475 PLEKHH2Q8IVE3 1493 aa14.22□□□□□ -0.13
ZNF558-201ENST00000301475 INSRP06213 1382 aa14.21□□□□□ -0.13
ZNF558-201ENST00000301475 CC2D1BQ5T0F9 858 aaKnown RBP14.21□□□□□ -0.13
ZNF558-201ENST00000301475 RSPH6AQ9H0K4 717 aa14.21□□□□□ -0.13
ZNF558-201ENST00000301475 KIAA0556O60303 1618 aa14.21□□□□□ -0.14
ZNF558-201ENST00000301475 PRG4Q92954 1404 aaPredicted RBP14.21□□□□□ -0.14
ZNF558-201ENST00000301475 CFDP1Q9UEE9 299 aaPredicted RBP14.2□□□□□ -0.14
ZNF558-201ENST00000301475 ITSN2Q9NZM3 1697 aa14.2□□□□□ -0.14
ZNF558-201ENST00000301475 NUP160Q12769 1436 aa14.2□□□□□ -0.14
ZNF558-201ENST00000301475 NUP155O75694 1391 aa14.2□□□□□ -0.14
ZNF558-201ENST00000301475 CARMIL2Q6F5E8 1435 aa14.19□□□□□ -0.14
ZNF558-201ENST00000301475 GPATCH8Q9UKJ3 1502 aaKnown RBP14.19□□□□□ -0.14
ZNF558-201ENST00000301475 ANKRD30AQ9BXX3 1397 aa14.19□□□□□ -0.14
ZNF558-201ENST00000301475 RAPGEF6Q8TEU7 1601 aa14.19□□□□□ -0.14
ZNF558-201ENST00000301475 RGS3P49796 1198 aa14.19□□□□□ -0.14
ZNF558-201ENST00000301475 TRPM1Q7Z4N2 1603 aa14.19□□□□□ -0.14
ZNF558-201ENST00000301475 KDM5DQ9BY66 1539 aa14.19□□□□□ -0.14
ZNF558-201ENST00000301475 ZNF777Q9ULD5 760 aaPredicted RBP14.19□□□□□ -0.14
ZNF558-201ENST00000301475 PLEKHH1Q9ULM0 1364 aa14.18□□□□□ -0.14
ZNF558-201ENST00000301475 COL17A1Q9UMD9 1497 aaPredicted RBP14.18□□□□□ -0.14
ZNF558-201ENST00000301475 POGKQ9P215 609 aa14.17□□□□□ -0.14
ZNF558-201ENST00000301475 VIRMAQ69YN4 1812 aaKnown RBP14.17□□□□□ -0.14
ZNF558-201ENST00000301475 TROQ12816 1431 aaPredicted RBP14.17□□□□□ -0.14
ZNF558-201ENST00000301475 DUSP27Q5VZP5 1158 aa14.17□□□□□ -0.14
ZNF558-201ENST00000301475 DISP3Q9P2K9 1392 aa14.16□□□□□ -0.14
ZNF558-201ENST00000301475 PRAG1Q86YV5 1406 aa14.15□□□□□ -0.14
ZNF558-201ENST00000301475 USP19O94966 1318 aa14.15□□□□□ -0.14
ZNF558-201ENST00000301475 NBPF1Q3BBV0 1214 aa14.15□□□□□ -0.15
ZNF558-201ENST00000301475 RRAGDQ9NQL2 400 aaPredicted RBP14.15□□□□□ -0.15
ZNF558-201ENST00000301475 ADAMTS8Q9UP79 889 aa14.15□□□□□ -0.15
ZNF558-201ENST00000301475 CDC42BPAQ5VT25 1732 aa14.13□□□□□ -0.15
ZNF558-201ENST00000301475 PANK3Q9H999 370 aa14.13□□□□□ -0.15
ZNF558-201ENST00000301475 TESK2Q96S53 571 aa14.12□□□□□ -0.15
ZNF558-201ENST00000301475 PTPRGP23470 1445 aa14.12□□□□□ -0.15
ZNF558-201ENST00000301475 ZNF521Q96K83 1311 aa14.12□□□□□ -0.15
ZNF558-201ENST00000301475 ADCY10Q96PN6 1610 aa14.12□□□□□ -0.15
ZNF558-201ENST00000301475 C9orf84Q5VXU9 1444 aa14.11□□□□□ -0.15
ZNF558-201ENST00000301475 GPRASP1Q5JY77 1395 aa14.11□□□□□ -0.15
ZNF558-201ENST00000301475 PRDM15P57071 1507 aaPredicted RBP14.1□□□□□ -0.15
ZNF558-201ENST00000301475 CHD1O14646 1710 aa14.1□□□□□ -0.15
ZNF558-201ENST00000301475 PLEKHD1A6NEE1 506 aa14.09□□□□□ -0.15
ZNF558-201ENST00000301475 SHANK2Q9UPX8 1470 aa14.09□□□□□ -0.15
ZNF558-201ENST00000301475 SEC24BO95487 1268 aa14.09□□□□□ -0.15
ZNF558-201ENST00000301475 NLRP1Q9C000 1473 aa14.09□□□□□ -0.15
ZNF558-201ENST00000301475 SLKQ9H2G2 1235 aaPredicted RBP14.08□□□□□ -0.16
ZNF558-201ENST00000301475 EIF3AQ14152 1382 aaKnown RBP14.08□□□□□ -0.16
ZNF558-201ENST00000301475 ERBINQ96RT1 1412 aa14.08□□□□□ -0.16
ZNF558-201ENST00000301475 GOLGA2Q08379 1002 aa14.07□□□□□ -0.16
ZNF558-201ENST00000301475 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.07□□□□□ -0.16
ZNF558-201ENST00000301475 LAMC1P11047 1609 aa14.07□□□□□ -0.16
ZNF558-201ENST00000301475 A2MP01023 1474 aa14.06□□□□□ -0.16
ZNF558-201ENST00000301475 IGHDP01880 384 aa14.06□□□□□ -0.16
ZNF558-201ENST00000301475 CLASP1Q7Z460 1538 aa14.06□□□□□ -0.16
ZNF558-201ENST00000301475 RGL3Q3MIN7 710 aa14.06□□□□□ -0.16
ZNF558-201ENST00000301475 FAM135AQ9P2D6 1515 aa14.05□□□□□ -0.16
ZNF558-201ENST00000301475 SLFN5Q08AF3 891 aa14.05□□□□□ -0.16
ZNF558-201ENST00000301475 SPINK5Q9NQ38 1064 aaPredicted RBP14.05□□□□□ -0.16
ZNF558-201ENST00000301475 MAGI2Q86UL8 1455 aa14.05□□□□□ -0.16
ZNF558-201ENST00000301475 CCDC144AA2RUR9 1427 aa14.04□□□□□ -0.16
ZNF558-201ENST00000301475 PPP2R1AP30153 589 aa14.04□□□□□ -0.16
ZNF558-201ENST00000301475 ERCC6L2Q5T890 1561 aa14.04□□□□□ -0.16
ZNF558-201ENST00000301475 WDR43Q15061 677 aaKnown RBP eCLIP14.04□□□□□ -0.16
ZNF558-201ENST00000301475 ANTXR1Q9H6X2 564 aa14.04□□□□□ -0.16
ZNF558-201ENST00000301475 ABCC10Q5T3U5 1492 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 187.2 ms