RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 KDM5DQ9BY66 1539 aa21.66■■□□□ 1.06
TMEM41B-201ENST00000299596 CAMSAP1Q5T5Y3 1602 aa21.64■■□□□ 1.06
TMEM41B-201ENST00000299596 FBXO31Q5XUX0 539 aaPredicted RBP21.63■■□□□ 1.05
TMEM41B-201ENST00000299596 MYO3AQ8NEV4 1616 aa21.62■■□□□ 1.05
TMEM41B-201ENST00000299596 PZPP20742 1482 aa21.62■■□□□ 1.05
TMEM41B-201ENST00000299596 PKD2Q13563 968 aa21.62■■□□□ 1.05
TMEM41B-201ENST00000299596 CEP170BQ9Y4F5 1589 aaPredicted RBP21.61■■□□□ 1.05
TMEM41B-201ENST00000299596 TNRQ92752 1358 aa21.6■■□□□ 1.05
TMEM41B-201ENST00000299596 NCKAP5LQ9HCH0 1330 aa21.6■■□□□ 1.05
TMEM41B-201ENST00000299596 PLA2R1Q13018 1463 aa21.6■■□□□ 1.05
TMEM41B-201ENST00000299596 ABCC5O15440 1437 aa21.6■■□□□ 1.05
TMEM41B-201ENST00000299596 FGD6Q6ZV73 1430 aa21.6■■□□□ 1.05
TMEM41B-201ENST00000299596 PTPN23Q9H3S7 1636 aa21.59■■□□□ 1.05
TMEM41B-201ENST00000299596 A2ML1A8K2U0 1454 aa21.59■■□□□ 1.05
TMEM41B-201ENST00000299596 ZNF142P52746 1687 aaPredicted RBP21.59■■□□□ 1.05
TMEM41B-201ENST00000299596 DUOX2Q9NRD8 1548 aa21.58■■□□□ 1.05
TMEM41B-201ENST00000299596 SHANK2Q9UPX8 1470 aa21.58■■□□□ 1.04
TMEM41B-201ENST00000299596 TCOF1Q13428 1488 aaKnown RBP21.57■■□□□ 1.04
TMEM41B-201ENST00000299596 EIF2AK4Q9P2K8 1649 aaKnown RBP21.57■■□□□ 1.04
TMEM41B-201ENST00000299596 RRP7BPQ9NSQ0 103 aa21.56■■□□□ 1.04
TMEM41B-201ENST00000299596 KIF15Q9NS87 1388 aa21.56■■□□□ 1.04
TMEM41B-201ENST00000299596 RNF17Q9BXT8 1623 aaKnown RBP21.56■■□□□ 1.04
TMEM41B-201ENST00000299596 DAPK1P53355 1430 aa21.56■■□□□ 1.04
TMEM41B-201ENST00000299596 ABCC3O15438 1527 aa21.52■■□□□ 1.04
TMEM41B-201ENST00000299596 ERBINQ96RT1 1412 aa21.52■■□□□ 1.04
TMEM41B-201ENST00000299596 THEMISQ8N1K5 641 aaPredicted RBP21.52■■□□□ 1.04
TMEM41B-201ENST00000299596 DNMT1P26358 1616 aaKnown RBP21.52■■□□□ 1.04
TMEM41B-201ENST00000299596 NLRP1Q9C000 1473 aa21.51■■□□□ 1.03
TMEM41B-201ENST00000299596 ANKRD30AQ9BXX3 1397 aa21.5■■□□□ 1.03
TMEM41B-201ENST00000299596 ZC3H13Q5T200 1668 aaKnown RBP21.5■■□□□ 1.03
TMEM41B-201ENST00000299596 CHIC2Q9UKJ5 165 aa21.5■■□□□ 1.03
TMEM41B-201ENST00000299596 CROCC2H7BZ55 1655 aa21.49■■□□□ 1.03
TMEM41B-201ENST00000299596 LTBP4Q8N2S1 1624 aa21.49■■□□□ 1.03
TMEM41B-201ENST00000299596 MROH1Q8NDA8 1641 aa21.47■■□□□ 1.03
TMEM41B-201ENST00000299596 FAM50AQ14320 339 aaKnown RBP21.47■■□□□ 1.03
TMEM41B-201ENST00000299596 ANKLE2Q86XL3 938 aa21.47■■□□□ 1.03
TMEM41B-201ENST00000299596 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.46■■□□□ 1.03
TMEM41B-201ENST00000299596 ZNF335Q9H4Z2 1342 aaPredicted RBP21.46■■□□□ 1.03
TMEM41B-201ENST00000299596 SPATA31D1Q6ZQQ2 1576 aa21.45■■□□□ 1.02
TMEM41B-201ENST00000299596 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.45■■□□□ 1.026e-6■□□□□ 11
TMEM41B-201ENST00000299596 UGGT1Q9NYU2 1555 aa21.44■■□□□ 1.02
TMEM41B-201ENST00000299596 ERVK-7P63135 1459 aa21.44■■□□□ 1.02
TMEM41B-201ENST00000299596 IQSEC2Q5JU85 1478 aa21.44■■□□□ 1.02
TMEM41B-201ENST00000299596 KANK1Q14678 1352 aa21.44■■□□□ 1.02
TMEM41B-201ENST00000299596 ARHGAP31Q2M1Z3 1444 aa21.43■■□□□ 1.02
TMEM41B-201ENST00000299596 PRDM15P57071 1507 aaPredicted RBP21.42■■□□□ 1.02
TMEM41B-201ENST00000299596 ADGRL2O95490 1459 aa21.4■■□□□ 1.02
TMEM41B-201ENST00000299596 CEP152O94986 1710 aa21.39■■□□□ 1.01
TMEM41B-201ENST00000299596 DEPDC5O75140 1603 aa21.37■■□□□ 1.01
TMEM41B-201ENST00000299596 NEURL4Q96JN8 1562 aa21.36■■□□□ 1.01
TMEM41B-201ENST00000299596 MED14O60244 1454 aa21.35■■□□□ 1.01
TMEM41B-201ENST00000299596 POLR1AO95602 1720 aaPredicted RBP21.35■■□□□ 1.01
TMEM41B-201ENST00000299596 NPHP4O75161 1426 aaPredicted RBP21.34■■□□□ 1.01
TMEM41B-201ENST00000299596 LMTK2Q8IWU2 1503 aa21.33■■□□□ 1.01
TMEM41B-201ENST00000299596 ANKRD50Q9ULJ7 1429 aa21.33■■□□□ 1
TMEM41B-201ENST00000299596 VWDEQ8N2E2 1590 aa21.31■■□□□ 1
TMEM41B-201ENST00000299596 UBAP1LF5GYI3 381 aa21.3■■□□□ 1
TMEM41B-201ENST00000299596 CFAP65Q6ZU64 1925 aaKnown RBP21.29■■□□□ 1
TMEM41B-201ENST00000299596 CPS1P31327 1500 aa21.28■■□□□ 1
TMEM41B-201ENST00000299596 TXNDC2Q86VQ3 553 aa21.28■■□□□ 1
TMEM41B-201ENST00000299596 STAG3Q9UJ98 1225 aa21.28■■□□□ 1
TMEM41B-201ENST00000299596 ROCK1Q13464 1354 aa21.27■■□□□ 1
TMEM41B-201ENST00000299596 IDI1Q13907 227 aa21.27■■□□□ 1
TMEM41B-201ENST00000299596 PPARGC1BQ86YN6 1023 aaKnown RBP21.27■■□□□ 1
TMEM41B-201ENST00000299596 EID1Q9Y6B2 187 aa21.27■■□□□ 1
TMEM41B-201ENST00000299596 UBR1Q8IWV7 1749 aa21.26■□□□□ 0.99
TMEM41B-201ENST00000299596 SCAF11Q99590 1463 aaKnown RBP21.25■□□□□ 0.99
TMEM41B-201ENST00000299596 ARHGAP23Q9P227 1491 aa21.25■□□□□ 0.99
TMEM41B-201ENST00000299596 SLIT1O75093 1534 aa21.24■□□□□ 0.99
TMEM41B-201ENST00000299596 LTKP29376 864 aa21.24■□□□□ 0.99
TMEM41B-201ENST00000299596 SLC52A1Q9NWF4 448 aa21.24■□□□□ 0.99
TMEM41B-201ENST00000299596 NOS1P29475 1434 aa21.24■□□□□ 0.99
TMEM41B-201ENST00000299596 EFCAB6Q5THR3 1501 aa21.24■□□□□ 0.99
TMEM41B-201ENST00000299596 IQGAP1P46940 1657 aa21.24■□□□□ 0.99
TMEM41B-201ENST00000299596 TMEM2Q9UHN6 1383 aa21.22■□□□□ 0.99
TMEM41B-201ENST00000299596 RPRD2Q5VT52 1461 aaKnown RBP21.21■□□□□ 0.99
TMEM41B-201ENST00000299596 ITGAEP38570 1179 aa21.21■□□□□ 0.99
TMEM41B-201ENST00000299596 TOM1O60784 492 aa21.21■□□□□ 0.99
TMEM41B-201ENST00000299596 PIK3C2BO00750 1634 aa21.2■□□□□ 0.98
TMEM41B-201ENST00000299596 SYNMO15061 1565 aa21.18■□□□□ 0.98
TMEM41B-201ENST00000299596 KDM5AP29375 1690 aaKnown RBP21.17■□□□□ 0.98
TMEM41B-201ENST00000299596 UNC13BO14795 1591 aa21.14■□□□□ 0.98
TMEM41B-201ENST00000299596 TET3O43151 1660 aa21.14■□□□□ 0.97
TMEM41B-201ENST00000299596 SCAF1Q9H7N4 1312 aaKnown RBP21.13■□□□□ 0.97
TMEM41B-201ENST00000299596 PIP4K2BP78356 416 aa21.12■□□□□ 0.97
TMEM41B-201ENST00000299596 NUP155O75694 1391 aa21.12■□□□□ 0.97
TMEM41B-201ENST00000299596 ADGRB3O60242 1522 aa21.11■□□□□ 0.97
TMEM41B-201ENST00000299596 LRRC7Q96NW7 1537 aa21.11■□□□□ 0.97
TMEM41B-201ENST00000299596 HDGFP51858 240 aaKnown RBP21.11■□□□□ 0.97
TMEM41B-201ENST00000299596 DISP3Q9P2K9 1392 aa21.1■□□□□ 0.97
TMEM41B-201ENST00000299596 RRBP1Q9P2E9 1410 aaKnown RBP21.09■□□□□ 0.97
TMEM41B-201ENST00000299596 GCC2Q8IWJ2 1684 aa21.08■□□□□ 0.96
TMEM41B-201ENST00000299596 STRCP1A6NGW2 1772 aa21.07■□□□□ 0.96
TMEM41B-201ENST00000299596 BCANQ96GW7 911 aa21.06■□□□□ 0.96
TMEM41B-201ENST00000299596 SLC26A8Q96RN1 970 aa21.06■□□□□ 0.96
TMEM41B-201ENST00000299596 IQGAP3Q86VI3 1631 aa21.06■□□□□ 0.96
TMEM41B-201ENST00000299596 KCNA6P17658 529 aa21.05■□□□□ 0.96
TMEM41B-201ENST00000299596 HSPA1LP34931 641 aa21.05■□□□□ 0.96
TMEM41B-201ENST00000299596 CHGAP10645 457 aaKnown RBP21.04■□□□□ 0.96
TMEM41B-201ENST00000299596 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms