RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 HSP90AA2PQ14568 343 aaPredicted RBP18.43■□□□□ 0.54
FUBP1-201ENST00000294623 PNNQ9H307 717 aaKnown RBP18.43■□□□□ 0.54
FUBP1-201ENST00000294623 RRAGDQ9NQL2 400 aaPredicted RBP18.43■□□□□ 0.54
FUBP1-201ENST00000294623 ISY1Q9ULR0 285 aaKnown RBP18.43■□□□□ 0.54
FUBP1-201ENST00000294623 ADGRL2O95490 1459 aa18.43■□□□□ 0.54
FUBP1-201ENST00000294623 CLASP1Q7Z460 1538 aa18.43■□□□□ 0.54
FUBP1-201ENST00000294623 TOPBP1Q92547 1522 aa18.43■□□□□ 0.54
FUBP1-201ENST00000294623 FANCD2Q9BXW9 1451 aa18.41■□□□□ 0.54
FUBP1-201ENST00000294623 LAMC1P11047 1609 aa18.4■□□□□ 0.54
FUBP1-201ENST00000294623 WDR62O43379 1518 aa18.4■□□□□ 0.54
FUBP1-201ENST00000294623 SLC4A3P48751 1232 aa18.39■□□□□ 0.54
FUBP1-201ENST00000294623 FOXD1Q16676 465 aa18.39■□□□□ 0.54
FUBP1-201ENST00000294623 ZMYND15Q9H091 742 aa18.39■□□□□ 0.54
FUBP1-201ENST00000294623 CENPJQ9HC77 1338 aaPredicted RBP18.39■□□□□ 0.53
FUBP1-201ENST00000294623 RAD54L2Q9Y4B4 1467 aa18.37■□□□□ 0.53
FUBP1-201ENST00000294623 ZNF608Q9ULD9 1512 aaPredicted RBP18.37■□□□□ 0.53
FUBP1-201ENST00000294623 CROCC2H7BZ55 1655 aa18.37■□□□□ 0.53
FUBP1-201ENST00000294623 FSD2A1L4K1 749 aa18.37■□□□□ 0.53
FUBP1-201ENST00000294623 VSIG10Q8N0Z9 540 aa18.37■□□□□ 0.53
FUBP1-201ENST00000294623 KDM5DQ9BY66 1539 aa18.36■□□□□ 0.53
FUBP1-201ENST00000294623 ITSN2Q9NZM3 1697 aa18.36■□□□□ 0.53
FUBP1-201ENST00000294623 MAPK8IP3Q9UPT6 1336 aa18.36■□□□□ 0.53
FUBP1-201ENST00000294623 NAP1L5Q96NT1 182 aaPredicted RBP18.35■□□□□ 0.53
FUBP1-201ENST00000294623 POLR3GLQ9BT43 218 aa18.35■□□□□ 0.53
FUBP1-201ENST00000294623 NINLQ9Y2I6 1382 aa18.35■□□□□ 0.53
FUBP1-201ENST00000294623 CEP170Q5SW79 1584 aa18.35■□□□□ 0.53
FUBP1-201ENST00000294623 GOLGA6L3A6NEY3 463 aa18.35■□□□□ 0.53
FUBP1-201ENST00000294623 CARD11Q9BXL7 1154 aa18.34■□□□□ 0.53
FUBP1-201ENST00000294623 TPM2P07951 284 aa18.34■□□□□ 0.53
FUBP1-201ENST00000294623 LAMC3Q9Y6N6 1575 aa18.33■□□□□ 0.53
FUBP1-201ENST00000294623 POGKQ9P215 609 aa18.33■□□□□ 0.53
FUBP1-201ENST00000294623 CDCA7LQ96GN5 454 aa18.31■□□□□ 0.52
FUBP1-201ENST00000294623 PLIN1O60240 522 aa18.3■□□□□ 0.52
FUBP1-201ENST00000294623 MRE11P49959 708 aa18.3■□□□□ 0.52
FUBP1-201ENST00000294623 AAMPQ13685 434 aa18.3■□□□□ 0.52
FUBP1-201ENST00000294623 COL17A1Q9UMD9 1497 aaPredicted RBP18.29■□□□□ 0.52
FUBP1-201ENST00000294623 ANKRD30AQ9BXX3 1397 aa18.28■□□□□ 0.52
FUBP1-201ENST00000294623 ANTXR1Q9H6X2 564 aa18.28■□□□□ 0.52
FUBP1-201ENST00000294623 IQGAP2Q13576 1575 aa18.28■□□□□ 0.52
FUBP1-201ENST00000294623 TRPM1Q7Z4N2 1603 aa18.28■□□□□ 0.52
FUBP1-201ENST00000294623 USP19O94966 1318 aa18.27■□□□□ 0.52
FUBP1-201ENST00000294623 CAMSAP2Q08AD1 1489 aa18.27■□□□□ 0.51
FUBP1-201ENST00000294623 CDK13Q14004 1512 aaKnown RBP18.26■□□□□ 0.51
FUBP1-201ENST00000294623 NLRP1Q9C000 1473 aa18.26■□□□□ 0.51
FUBP1-201ENST00000294623 PER1O15534 1290 aaPredicted RBP18.26■□□□□ 0.51
FUBP1-201ENST00000294623 XRCC6P12956 609 aaKnown RBP eCLIP18.26■□□□□ 0.512e-11■■■□□ 19
FUBP1-201ENST00000294623 UPF2Q9HAU5 1272 aaKnown RBP18.26■□□□□ 0.51
FUBP1-201ENST00000294623 KIAA0586Q9BVV6 1533 aa18.25■□□□□ 0.51
FUBP1-201ENST00000294623 SCAPERQ9BY12 1400 aa18.25■□□□□ 0.51
FUBP1-201ENST00000294623 NGEFQ8N5V2 710 aa18.25■□□□□ 0.51
FUBP1-201ENST00000294623 GPRASP1Q5JY77 1395 aa18.25■□□□□ 0.51
FUBP1-201ENST00000294623 ST20-MTHFSA0A0A6YYL1 179 aa18.25■□□□□ 0.51
FUBP1-201ENST00000294623 SHANK2Q9UPX8 1470 aa18.24■□□□□ 0.51
FUBP1-201ENST00000294623 PDCL3Q9H2J4 239 aa18.24■□□□□ 0.51
FUBP1-201ENST00000294623 EIF4G3O43432 1585 aaKnown RBP18.24■□□□□ 0.51
FUBP1-201ENST00000294623 PLXNC1O60486 1568 aa18.24■□□□□ 0.51
FUBP1-201ENST00000294623 ZNF521Q96K83 1311 aa18.24■□□□□ 0.51
FUBP1-201ENST00000294623 DUSP27Q5VZP5 1158 aa18.23■□□□□ 0.51
FUBP1-201ENST00000294623 CGNL1Q0VF96 1302 aa18.23■□□□□ 0.51
FUBP1-201ENST00000294623 ADCY10Q96PN6 1610 aa18.22■□□□□ 0.51
FUBP1-201ENST00000294623 EIF2AK4Q9P2K8 1649 aaKnown RBP18.22■□□□□ 0.51
FUBP1-201ENST00000294623 CNGB1Q14028 1251 aaPredicted RBP18.22■□□□□ 0.51
FUBP1-201ENST00000294623 C20orf194Q5TEA3 1177 aa18.22■□□□□ 0.51
FUBP1-201ENST00000294623 PTMSP20962 102 aa18.21■□□□□ 0.51
FUBP1-201ENST00000294623 TERF1P54274 439 aa18.21■□□□□ 0.51
FUBP1-201ENST00000294623 PKD2Q13563 968 aa18.21■□□□□ 0.51
FUBP1-201ENST00000294623 PRDM15P57071 1507 aaPredicted RBP18.21■□□□□ 0.5
FUBP1-201ENST00000294623 GOLGA2Q08379 1002 aa18.21■□□□□ 0.5
FUBP1-201ENST00000294623 MCM4P33991 863 aa18.2■□□□□ 0.5
FUBP1-201ENST00000294623 SKAP1Q86WV1 359 aa18.2■□□□□ 0.5
FUBP1-201ENST00000294623 CALD1Q05682 793 aaKnown RBP18.19■□□□□ 0.5
FUBP1-201ENST00000294623 ZNF326Q5BKZ1 582 aaKnown RBP18.19■□□□□ 0.5
FUBP1-201ENST00000294623 DDX11L8A8MPP1 907 aa18.19■□□□□ 0.5
FUBP1-201ENST00000294623 MAP7D2Q96T17 732 aa18.19■□□□□ 0.5
FUBP1-201ENST00000294623 ABCC2Q92887 1545 aa18.19■□□□□ 0.5
FUBP1-201ENST00000294623 NKTRP30414 1462 aaKnown RBP18.18■□□□□ 0.5
FUBP1-201ENST00000294623 ESPNB1AK53 854 aa18.18■□□□□ 0.5
FUBP1-201ENST00000294623 RGS3P49796 1198 aa18.18■□□□□ 0.5
FUBP1-201ENST00000294623 PDE3AQ14432 1141 aa18.18■□□□□ 0.5
FUBP1-201ENST00000294623 TRMT2AQ8IZ69 625 aaKnown RBP18.18■□□□□ 0.5
FUBP1-201ENST00000294623 PTPRGP23470 1445 aa18.18■□□□□ 0.5
FUBP1-201ENST00000294623 MYH16Q9H6N6 1097 aa18.18■□□□□ 0.5
FUBP1-201ENST00000294623 CHMP5Q9NZZ3 219 aa18.17■□□□□ 0.5
FUBP1-201ENST00000294623 ANKRD50Q9ULJ7 1429 aa18.17■□□□□ 0.5
FUBP1-201ENST00000294623 TBC1D32Q96NH3 1257 aa18.17■□□□□ 0.5
FUBP1-201ENST00000294623 PRAG1Q86YV5 1406 aa18.16■□□□□ 0.5
FUBP1-201ENST00000294623 NUP160Q12769 1436 aa18.16■□□□□ 0.5
FUBP1-201ENST00000294623 SENP3-EIF4A1A0A087X0R7 540 aa18.15■□□□□ 0.5
FUBP1-201ENST00000294623 SLFN5Q08AF3 891 aa18.15■□□□□ 0.5
FUBP1-201ENST00000294623 PIK3C2GO75747 1445 aa18.14■□□□□ 0.49
FUBP1-201ENST00000294623 PLEKHH1Q9ULM0 1364 aa18.13■□□□□ 0.49
FUBP1-201ENST00000294623 ABCC10Q5T3U5 1492 aa18.13■□□□□ 0.49
FUBP1-201ENST00000294623 RAPGEF6Q8TEU7 1601 aa18.13■□□□□ 0.49
FUBP1-201ENST00000294623 GRPEL1Q9HAV7 217 aa18.13■□□□□ 0.49
FUBP1-201ENST00000294623 TROQ12816 1431 aaPredicted RBP18.12■□□□□ 0.49
FUBP1-201ENST00000294623 WDR43Q15061 677 aaKnown RBP eCLIP18.12■□□□□ 0.49
FUBP1-201ENST00000294623 PMFBP1Q8TBY8 1022 aa18.12■□□□□ 0.49
FUBP1-201ENST00000294623 TRIM44Q96DX7 344 aaPredicted RBP18.12■□□□□ 0.49
FUBP1-201ENST00000294623 SLKQ9H2G2 1235 aaPredicted RBP18.11■□□□□ 0.49
FUBP1-201ENST00000294623 TRAK2O60296 914 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms