RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 ARID4BQ4LE39 1312 aaPredicted RBP27.6■■■□□ 2.01
CXCL16-201ENST00000293778 HNRNPUQ00839 825 aaKnown RBP eCLIP27.6■■■□□ 2.01
CXCL16-201ENST00000293778 TRAPPC8Q9Y2L5 1435 aa27.59■■■□□ 2.01
CXCL16-201ENST00000293778 ARAP3Q8WWN8 1544 aa27.59■■■□□ 2.01
CXCL16-201ENST00000293778 MAGI2Q86UL8 1455 aa27.59■■■□□ 2.01
CXCL16-201ENST00000293778 PLA2R1Q13018 1463 aa27.58■■■□□ 2
CXCL16-201ENST00000293778 CCDC184Q52MB2 194 aa27.56■■■□□ 2
CXCL16-201ENST00000293778 WDR7Q9Y4E6 1490 aa27.55■■■□□ 2
CXCL16-201ENST00000293778 FKBP8Q14318 412 aa27.53■■■□□ 2
CXCL16-201ENST00000293778 POLR3GLQ9BT43 218 aa27.52■■■□□ 2
CXCL16-201ENST00000293778 MRS2Q9HD23 443 aa27.51■■□□□ 1.99
CXCL16-201ENST00000293778 DHX29Q7Z478 1369 aaKnown RBP27.51■■□□□ 1.99
CXCL16-201ENST00000293778 NEFLP07196 543 aa27.51■■□□□ 1.99
CXCL16-201ENST00000293778 ROCK2O75116 1388 aaKnown RBP27.5■■□□□ 1.99
CXCL16-201ENST00000293778 PRAG1Q86YV5 1406 aa27.5■■□□□ 1.99
CXCL16-201ENST00000293778 SPAG9O60271 1321 aaKnown RBP27.5■■□□□ 1.99
CXCL16-201ENST00000293778 RTEL1-TNFRSF6BF6WH68 1400 aa27.49■■□□□ 1.99
CXCL16-201ENST00000293778 ATP10AO60312 1499 aa27.49■■□□□ 1.99
CXCL16-201ENST00000293778 TRPM1Q7Z4N2 1603 aa27.48■■□□□ 1.99
CXCL16-201ENST00000293778 RGL3Q3MIN7 710 aa27.47■■□□□ 1.99
CXCL16-201ENST00000293778 ZFYVE16Q7Z3T8 1539 aa27.47■■□□□ 1.99
CXCL16-201ENST00000293778 ST20-MTHFSA0A0A6YYL1 179 aa27.47■■□□□ 1.99
CXCL16-201ENST00000293778 A2MP01023 1474 aa27.46■■□□□ 1.99
CXCL16-201ENST00000293778 AFAP1Q8N556 730 aa27.45■■□□□ 1.99
CXCL16-201ENST00000293778 ABCA9Q8IUA7 1624 aa27.44■■□□□ 1.98
CXCL16-201ENST00000293778 FAM9BQ8IZU0 186 aa27.44■■□□□ 1.98
CXCL16-201ENST00000293778 FANCAO15360 1455 aa27.43■■□□□ 1.98
CXCL16-201ENST00000293778 BCANQ96GW7 911 aa27.41■■□□□ 1.98
CXCL16-201ENST00000293778 GPRASP1Q5JY77 1395 aa27.38■■□□□ 1.97
CXCL16-201ENST00000293778 ASXL2Q76L83 1435 aa27.37■■□□□ 1.97
CXCL16-201ENST00000293778 INO80Q9ULG1 1556 aaPredicted RBP27.36■■□□□ 1.97
CXCL16-201ENST00000293778 ATP7AQ04656 1500 aa27.36■■□□□ 1.97
CXCL16-201ENST00000293778 EIF2AK4Q9P2K8 1649 aaKnown RBP27.36■■□□□ 1.97
CXCL16-201ENST00000293778 LAMC1P11047 1609 aa27.35■■□□□ 1.97
CXCL16-201ENST00000293778 NBPF1Q3BBV0 1214 aa27.35■■□□□ 1.97
CXCL16-201ENST00000293778 E9PCH4 1651 aa27.34■■□□□ 1.97
CXCL16-201ENST00000293778 ADGRL1O94910 1474 aa27.34■■□□□ 1.97
CXCL16-201ENST00000293778 DEPDC5O75140 1603 aa27.34■■□□□ 1.97
CXCL16-201ENST00000293778 CNGB1Q14028 1251 aaPredicted RBP27.32■■□□□ 1.96
CXCL16-201ENST00000293778 SCAPERQ9BY12 1400 aa27.31■■□□□ 1.96
CXCL16-201ENST00000293778 ZBED9Q6R2W3 1325 aa27.31■■□□□ 1.96
CXCL16-201ENST00000293778 PRDM15P57071 1507 aaPredicted RBP27.31■■□□□ 1.96
CXCL16-201ENST00000293778 TRPM2O94759 1503 aa27.28■■□□□ 1.96
CXCL16-201ENST00000293778 OSCARQ8IYS5 282 aa27.28■■□□□ 1.96
CXCL16-201ENST00000293778 TET3O43151 1660 aa27.26■■□□□ 1.95
CXCL16-201ENST00000293778 MYT1LQ9UL68 1186 aa27.26■■□□□ 1.95
CXCL16-201ENST00000293778 KANK1Q14678 1352 aa27.26■■□□□ 1.95
CXCL16-201ENST00000293778 SPHKAPQ2M3C7 1700 aa27.25■■□□□ 1.95
CXCL16-201ENST00000293778 PTPRTO14522 1441 aa27.25■■□□□ 1.95
CXCL16-201ENST00000293778 VWDEQ8N2E2 1590 aa27.23■■□□□ 1.95
CXCL16-201ENST00000293778 NPM1P06748 294 aaKnown RBP eCLIP27.23■■□□□ 1.95
CXCL16-201ENST00000293778 KTN1Q86UP2 1357 aaKnown RBP27.23■■□□□ 1.95
CXCL16-201ENST00000293778 RNF17Q9BXT8 1623 aaKnown RBP27.22■■□□□ 1.95
CXCL16-201ENST00000293778 COL17A1Q9UMD9 1497 aaPredicted RBP27.21■■□□□ 1.95
CXCL16-201ENST00000293778 KIF3BO15066 747 aa27.21■■□□□ 1.95
CXCL16-201ENST00000293778 CEP152O94986 1710 aa27.21■■□□□ 1.95
CXCL16-201ENST00000293778 CLTCL1P53675 1640 aa27.2■■□□□ 1.94
CXCL16-201ENST00000293778 TESK2Q96S53 571 aa27.19■■□□□ 1.94
CXCL16-201ENST00000293778 RALBP1Q15311 655 aa27.18■■□□□ 1.94
CXCL16-201ENST00000293778 MADDQ8WXG6 1647 aa27.18■■□□□ 1.94
CXCL16-201ENST00000293778 TMC1Q8TDI8 760 aa27.17■■□□□ 1.94
CXCL16-201ENST00000293778 TSHZ2Q9NRE2 1034 aa27.17■■□□□ 1.94
CXCL16-201ENST00000293778 MYBBP1AQ9BQG0 1328 aaKnown RBP27.16■■□□□ 1.94
CXCL16-201ENST00000293778 MROH1Q8NDA8 1641 aa27.16■■□□□ 1.94
CXCL16-201ENST00000293778 DISP3Q9P2K9 1392 aa27.16■■□□□ 1.94
CXCL16-201ENST00000293778 PNISRQ8TF01 805 aaKnown RBP27.15■■□□□ 1.94
CXCL16-201ENST00000293778 KIDINS220Q9ULH0 1771 aa27.15■■□□□ 1.94
CXCL16-201ENST00000293778 STAC3Q96MF2 364 aa27.14■■□□□ 1.94
CXCL16-201ENST00000293778 ZNF518AQ6AHZ1 1483 aa27.14■■□□□ 1.94
CXCL16-201ENST00000293778 BRD4O60885 1362 aaPredicted RBP27.13■■□□□ 1.93
CXCL16-201ENST00000293778 TMF1P82094 1093 aa27.11■■□□□ 1.93
CXCL16-201ENST00000293778 CFAP74Q9C0B2 1584 aa27.1■■□□□ 1.93
CXCL16-201ENST00000293778 IRX6P78412 446 aaPredicted RBP27.1■■□□□ 1.93
CXCL16-201ENST00000293778 CD109Q6YHK3 1445 aa27.1■■□□□ 1.93
CXCL16-201ENST00000293778 PER1O15534 1290 aaPredicted RBP27.08■■□□□ 1.93
CXCL16-201ENST00000293778 IQGAP1P46940 1657 aa27.08■■□□□ 1.93
CXCL16-201ENST00000293778 PARD3Q8TEW0 1356 aa27.08■■□□□ 1.93
CXCL16-201ENST00000293778 NEURL4Q96JN8 1562 aa27.07■■□□□ 1.92
CXCL16-201ENST00000293778 ERICH6BQ5W0A0 696 aa27.06■■□□□ 1.92
CXCL16-201ENST00000293778 EFCAB6Q5THR3 1501 aa27.06■■□□□ 1.92
CXCL16-201ENST00000293778 LRPPRCP42704 1394 aaKnown RBP27.05■■□□□ 1.92
CXCL16-201ENST00000293778 POGZQ7Z3K3 1410 aa27.05■■□□□ 1.92
CXCL16-201ENST00000293778 SMG6Q86US8 1419 aaKnown RBP27.05■■□□□ 1.92
CXCL16-201ENST00000293778 WASHC2CQ9Y4E1 1318 aa27.04■■□□□ 1.92
CXCL16-201ENST00000293778 NLRP13Q86W25 1043 aa27.02■■□□□ 1.92
CXCL16-201ENST00000293778 SCAF11Q99590 1463 aaKnown RBP27.02■■□□□ 1.92
CXCL16-201ENST00000293778 LMTK2Q8IWU2 1503 aa27.02■■□□□ 1.92
CXCL16-201ENST00000293778 PPRC1Q5VV67 1664 aaKnown RBP27.01■■□□□ 1.91
CXCL16-201ENST00000293778 PANK3Q9H999 370 aa27.01■■□□□ 1.91
CXCL16-201ENST00000293778 UGGT1Q9NYU2 1555 aa27■■□□□ 1.91
CXCL16-201ENST00000293778 MLH3Q9UHC1 1453 aa27■■□□□ 1.91
CXCL16-201ENST00000293778 KIAA1210Q9ULL0 1709 aa26.98■■□□□ 1.91
CXCL16-201ENST00000293778 HECW2Q9P2P5 1572 aa26.97■■□□□ 1.91
CXCL16-201ENST00000293778 NUDCQ9Y266 331 aa26.97■■□□□ 1.91
CXCL16-201ENST00000293778 KIF1BO60333 1816 aa26.97■■□□□ 1.91
CXCL16-201ENST00000293778 MYOM2P54296 1465 aa26.96■■□□□ 1.91
CXCL16-201ENST00000293778 FRMPD1Q5SYB0 1578 aa26.95■■□□□ 1.91
CXCL16-201ENST00000293778 CC2D1BQ5T0F9 858 aaKnown RBP26.94■■□□□ 1.9
CXCL16-201ENST00000293778 MAP3K4Q9Y6R4 1608 aa26.94■■□□□ 1.9
CXCL16-201ENST00000293778 PPP4R2Q9NY27 417 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms