RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 CLTCQ00610 1675 aaKnown RBP15.33■□□□□ 0.04
CCDC58-201ENST00000291458 ESF1Q9H501 851 aaKnown RBP15.33■□□□□ 0.04
CCDC58-201ENST00000291458 PREX1Q8TCU6 1659 aa15.32■□□□□ 0.04
CCDC58-201ENST00000291458 ARHGEF5Q12774 1597 aa15.32■□□□□ 0.04
CCDC58-201ENST00000291458 HSPA2P54652 639 aa15.31■□□□□ 0.04
CCDC58-201ENST00000291458 PTPN23Q9H3S7 1636 aa15.3■□□□□ 0.04
CCDC58-201ENST00000291458 GGT6Q6P531 493 aa15.28■□□□□ 0.04
CCDC58-201ENST00000291458 SPINK5Q9NQ38 1064 aaPredicted RBP15.28■□□□□ 0.04
CCDC58-201ENST00000291458 CROCC2H7BZ55 1655 aa15.28■□□□□ 0.04
CCDC58-201ENST00000291458 RTEL1-TNFRSF6BF6WH68 1400 aa15.26■□□□□ 0.03
CCDC58-201ENST00000291458 MROH2AA6NES4 1674 aa15.26■□□□□ 0.03
CCDC58-201ENST00000291458 CAPN15O75808 1086 aa15.25■□□□□ 0.03
CCDC58-201ENST00000291458 MIA2Q96PC5 1412 aa15.25■□□□□ 0.03
CCDC58-201ENST00000291458 CNTLNQ9NXG0 1405 aa15.25■□□□□ 0.03
CCDC58-201ENST00000291458 UHRF1BP1Q6BDS2 1440 aa15.24■□□□□ 0.03
CCDC58-201ENST00000291458 FGD6Q6ZV73 1430 aa15.24■□□□□ 0.03
CCDC58-201ENST00000291458 MAST1Q9Y2H9 1570 aa15.24■□□□□ 0.03
CCDC58-201ENST00000291458 TSPY4P0CV99 314 aa15.23■□□□□ 0.03
CCDC58-201ENST00000291458 TSPY10P0CW01 314 aa15.23■□□□□ 0.03
CCDC58-201ENST00000291458 ZNF219Q9P2Y4 722 aaPredicted RBP15.23■□□□□ 0.03
CCDC58-201ENST00000291458 KIF3BO15066 747 aa15.22■□□□□ 0.03
CCDC58-201ENST00000291458 DHX29Q7Z478 1369 aaKnown RBP15.22■□□□□ 0.03
CCDC58-201ENST00000291458 DNMT1P26358 1616 aaKnown RBP15.21■□□□□ 0.03
CCDC58-201ENST00000291458 PPARGC1BQ86YN6 1023 aaKnown RBP15.21■□□□□ 0.03
CCDC58-201ENST00000291458 ATF5Q9Y2D1 282 aaPredicted RBP15.21■□□□□ 0.03
CCDC58-201ENST00000291458 MYO3AQ8NEV4 1616 aa15.2■□□□□ 0.02
CCDC58-201ENST00000291458 RSPH4AQ5TD94 716 aa15.19■□□□□ 0.02
CCDC58-201ENST00000291458 ZMYM3Q14202 1370 aa15.19■□□□□ 0.02
CCDC58-201ENST00000291458 SETD1BQ9UPS6 1966 aaKnown RBP15.18■□□□□ 0.02
CCDC58-201ENST00000291458 DAPK1P53355 1430 aa15.18■□□□□ 0.02
CCDC58-201ENST00000291458 KDM5DQ9BY66 1539 aa15.18■□□□□ 0.02
CCDC58-201ENST00000291458 TCOF1Q13428 1488 aaKnown RBP15.18■□□□□ 0.02
CCDC58-201ENST00000291458 ABCC5O15440 1437 aa15.17■□□□□ 0.02
CCDC58-201ENST00000291458 CEP152O94986 1710 aa15.17■□□□□ 0.02
CCDC58-201ENST00000291458 FAM50AQ14320 339 aaKnown RBP15.17■□□□□ 0.02
CCDC58-201ENST00000291458 RNF17Q9BXT8 1623 aaKnown RBP15.17■□□□□ 0.02
CCDC58-201ENST00000291458 SHANK2Q9UPX8 1470 aa15.16■□□□□ 0.02
CCDC58-201ENST00000291458 EIF2AK4Q9P2K8 1649 aaKnown RBP15.16■□□□□ 0.02
CCDC58-201ENST00000291458 KIF15Q9NS87 1388 aa15.15■□□□□ 0.02
CCDC58-201ENST00000291458 CHIC2Q9UKJ5 165 aa15.15■□□□□ 0.02
CCDC58-201ENST00000291458 STRCQ7RTU9 1775 aa15.15■□□□□ 0.02
CCDC58-201ENST00000291458 DUOX2Q9NRD8 1548 aa15.14■□□□□ 0.01
CCDC58-201ENST00000291458 ZNF142P52746 1687 aaPredicted RBP15.14■□□□□ 0.01
CCDC58-201ENST00000291458 PTPRKQ15262 1439 aa15.14■□□□□ 0.01
CCDC58-201ENST00000291458 NPATQ14207 1427 aa15.13■□□□□ 0.01
CCDC58-201ENST00000291458 RRP7BPQ9NSQ0 103 aa15.13■□□□□ 0.01
CCDC58-201ENST00000291458 MROH1Q8NDA8 1641 aa15.13■□□□□ 0.01
CCDC58-201ENST00000291458 CEP170BQ9Y4F5 1589 aaPredicted RBP15.12■□□□□ 0.01
CCDC58-201ENST00000291458 ZC3H13Q5T200 1668 aaKnown RBP15.12■□□□□ 0.01
CCDC58-201ENST00000291458 WASHC2CQ9Y4E1 1318 aa15.12■□□□□ 0.01
CCDC58-201ENST00000291458 ABCC3O15438 1527 aa15.12■□□□□ 0.01
CCDC58-201ENST00000291458 CFAP65Q6ZU64 1925 aaKnown RBP15.11■□□□□ 0.01
CCDC58-201ENST00000291458 CAMSAP1Q5T5Y3 1602 aa15.11■□□□□ 0.01
CCDC58-201ENST00000291458 PZPP20742 1482 aa15.09■□□□□ 0.01
CCDC58-201ENST00000291458 FAM135AQ9P2D6 1515 aa15.09■□□□□ 0.01
CCDC58-201ENST00000291458 FBXO31Q5XUX0 539 aaPredicted RBP15.09■□□□□ 0.01
CCDC58-201ENST00000291458 ILDR1Q86SU0 546 aaPredicted RBP15.07■□□□□ 0
CCDC58-201ENST00000291458 TNRQ92752 1358 aa15.07■□□□□ 0
CCDC58-201ENST00000291458 ANKRD30AQ9BXX3 1397 aa15.07■□□□□ 0
CCDC58-201ENST00000291458 ERBINQ96RT1 1412 aa15.07■□□□□ 0
CCDC58-201ENST00000291458 PRDM15P57071 1507 aaPredicted RBP15.07■□□□□ 0
CCDC58-201ENST00000291458 ITGAEP38570 1179 aa15.06■□□□□ 0
CCDC58-201ENST00000291458 NCOA1Q15788 1441 aa15.06■□□□□ 0
CCDC58-201ENST00000291458 DEPDC5O75140 1603 aa15.05■□□□□ -0
CCDC58-201ENST00000291458 A2ML1A8K2U0 1454 aa15.04■□□□□ -0
CCDC58-201ENST00000291458 ADGRL2O95490 1459 aa15.03■□□□□ -0
CCDC58-201ENST00000291458 NCKAP5LQ9HCH0 1330 aa15.02■□□□□ -0
CCDC58-201ENST00000291458 DSG3P32926 999 aa15.02■□□□□ -0
CCDC58-201ENST00000291458 POLR1AO95602 1720 aaPredicted RBP15.02□□□□□ -0.01
CCDC58-201ENST00000291458 ERVK-7P63135 1459 aa15.01□□□□□ -0.01
CCDC58-201ENST00000291458 SPATA31D1Q6ZQQ2 1576 aa15□□□□□ -0.01
CCDC58-201ENST00000291458 KANK1Q14678 1352 aa14.99□□□□□ -0.01
CCDC58-201ENST00000291458 PLA2R1Q13018 1463 aa14.98□□□□□ -0.01
CCDC58-201ENST00000291458 ANKRD50Q9ULJ7 1429 aa14.98□□□□□ -0.01
CCDC58-201ENST00000291458 UGGT1Q9NYU2 1555 aa14.98□□□□□ -0.01
CCDC58-201ENST00000291458 PTPRTO14522 1441 aa14.97□□□□□ -0.01
CCDC58-201ENST00000291458 NLRP1Q9C000 1473 aa14.96□□□□□ -0.01
CCDC58-201ENST00000291458 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.96□□□□□ -0.02
CCDC58-201ENST00000291458 VWDEQ8N2E2 1590 aa14.95□□□□□ -0.02
CCDC58-201ENST00000291458 NEURL4Q96JN8 1562 aa14.95□□□□□ -0.02
CCDC58-201ENST00000291458 EFCAB6Q5THR3 1501 aa14.95□□□□□ -0.02
CCDC58-201ENST00000291458 UBR1Q8IWV7 1749 aa14.95□□□□□ -0.02
CCDC58-201ENST00000291458 CERKQ8TCT0 537 aa14.94□□□□□ -0.02
CCDC58-201ENST00000291458 UNC13BO14795 1591 aa14.94□□□□□ -0.02
CCDC58-201ENST00000291458 PIK3C2BO00750 1634 aa14.93□□□□□ -0.02
CCDC58-201ENST00000291458 ABCB7O75027 752 aa14.92□□□□□ -0.02
CCDC58-201ENST00000291458 PKD2Q13563 968 aa14.92□□□□□ -0.02
CCDC58-201ENST00000291458 POLA2Q14181 598 aa14.92□□□□□ -0.02
CCDC58-201ENST00000291458 FBXO41Q8TF61 875 aa14.92□□□□□ -0.02
CCDC58-201ENST00000291458 TET3O43151 1660 aa14.92□□□□□ -0.02
CCDC58-201ENST00000291458 LMTK2Q8IWU2 1503 aa14.92□□□□□ -0.02
CCDC58-201ENST00000291458 ZNF335Q9H4Z2 1342 aaPredicted RBP14.92□□□□□ -0.02
CCDC58-201ENST00000291458 GCC2Q8IWJ2 1684 aa14.91□□□□□ -0.02
CCDC58-201ENST00000291458 SYNMO15061 1565 aa14.91□□□□□ -0.02
CCDC58-201ENST00000291458 LTBP4Q8N2S1 1624 aa14.9□□□□□ -0.02
CCDC58-201ENST00000291458 ARHGAP31Q2M1Z3 1444 aa14.9□□□□□ -0.02
CCDC58-201ENST00000291458 IQGAP1P46940 1657 aa14.9□□□□□ -0.02
CCDC58-201ENST00000291458 ROCK1Q13464 1354 aa14.89□□□□□ -0.03
CCDC58-201ENST00000291458 RRBP1Q9P2E9 1410 aaKnown RBP14.89□□□□□ -0.03
CCDC58-201ENST00000291458 THEMISQ8N1K5 641 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms