RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 KDM5DQ9BY66 1539 aa24.04■■□□□ 1.44
PDE6D-201ENST00000287600 FAM135AQ9P2D6 1515 aa24.02■■□□□ 1.44
PDE6D-201ENST00000287600 RSPH4AQ5TD94 716 aa24.02■■□□□ 1.44
PDE6D-201ENST00000287600 NCKAP5LQ9HCH0 1330 aa24.02■■□□□ 1.44
PDE6D-201ENST00000287600 KIF3BO15066 747 aa24.01■■□□□ 1.43
PDE6D-201ENST00000287600 IQSEC2Q5JU85 1478 aa24■■□□□ 1.43
PDE6D-201ENST00000287600 A2ML1A8K2U0 1454 aa23.99■■□□□ 1.43
PDE6D-201ENST00000287600 TCOF1Q13428 1488 aaKnown RBP23.99■■□□□ 1.43
PDE6D-201ENST00000287600 DNMT1P26358 1616 aaKnown RBP23.97■■□□□ 1.43
PDE6D-201ENST00000287600 PKD2Q13563 968 aa23.97■■□□□ 1.43
PDE6D-201ENST00000287600 PZPP20742 1482 aa23.96■■□□□ 1.43
PDE6D-201ENST00000287600 TSPY4P0CV99 314 aa23.96■■□□□ 1.43
PDE6D-201ENST00000287600 TSPY10P0CW01 314 aa23.96■■□□□ 1.43
PDE6D-201ENST00000287600 MAP3K1Q13233 1512 aa23.94■■□□□ 1.42
PDE6D-201ENST00000287600 TNRQ92752 1358 aa23.94■■□□□ 1.42
PDE6D-201ENST00000287600 MAST1Q9Y2H9 1570 aa23.94■■□□□ 1.42
PDE6D-201ENST00000287600 POLR1AO95602 1720 aaPredicted RBP23.93■■□□□ 1.42
PDE6D-201ENST00000287600 WASHC2CQ9Y4E1 1318 aa23.93■■□□□ 1.42
PDE6D-201ENST00000287600 ZNF335Q9H4Z2 1342 aaPredicted RBP23.92■■□□□ 1.42
PDE6D-201ENST00000287600 RNF17Q9BXT8 1623 aaKnown RBP23.91■■□□□ 1.42
PDE6D-201ENST00000287600 FBXO31Q5XUX0 539 aaPredicted RBP23.9■■□□□ 1.42
PDE6D-201ENST00000287600 MYOM3Q5VTT5 1437 aa23.9■■□□□ 1.42
PDE6D-201ENST00000287600 ZC3H13Q5T200 1668 aaKnown RBP23.89■■□□□ 1.42
PDE6D-201ENST00000287600 KANK4Q5T7N3 995 aaPredicted RBP23.89■■□□□ 1.41
PDE6D-201ENST00000287600 EIF2AK4Q9P2K8 1649 aaKnown RBP23.88■■□□□ 1.41
PDE6D-201ENST00000287600 MIA2Q96PC5 1412 aa23.88■■□□□ 1.41
PDE6D-201ENST00000287600 NLRP1Q9C000 1473 aa23.85■■□□□ 1.41
PDE6D-201ENST00000287600 NEURL4Q96JN8 1562 aa23.85■■□□□ 1.41
PDE6D-201ENST00000287600 ABCC3O15438 1527 aa23.84■■□□□ 1.41
PDE6D-201ENST00000287600 DISP3Q9P2K9 1392 aa23.83■■□□□ 1.41
PDE6D-201ENST00000287600 APLP2Q06481 763 aa23.83■■□□□ 1.41
PDE6D-201ENST00000287600 UGGT1Q9NYU2 1555 aa23.82■■□□□ 1.4
PDE6D-201ENST00000287600 CROCC2H7BZ55 1655 aa23.82■■□□□ 1.4
PDE6D-201ENST00000287600 SPATA31D1Q6ZQQ2 1576 aa23.81■■□□□ 1.4
PDE6D-201ENST00000287600 CEP152O94986 1710 aa23.81■■□□□ 1.4
PDE6D-201ENST00000287600 MROH1Q8NDA8 1641 aa23.81■■□□□ 1.4
PDE6D-201ENST00000287600 DUOX2Q9NRD8 1548 aa23.79■■□□□ 1.4
PDE6D-201ENST00000287600 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.79■■□□□ 1.4
PDE6D-201ENST00000287600 UBAP1LF5GYI3 381 aa23.78■■□□□ 1.4
PDE6D-201ENST00000287600 PTPN23Q9H3S7 1636 aa23.77■■□□□ 1.4
PDE6D-201ENST00000287600 SHANK2Q9UPX8 1470 aa23.76■■□□□ 1.39
PDE6D-201ENST00000287600 THEMISQ8N1K5 641 aaPredicted RBP23.76■■□□□ 1.39
PDE6D-201ENST00000287600 ERVK-7P63135 1459 aa23.75■■□□□ 1.39
PDE6D-201ENST00000287600 CPS1P31327 1500 aa23.75■■□□□ 1.39
PDE6D-201ENST00000287600 DEPDC5O75140 1603 aa23.75■■□□□ 1.39
PDE6D-201ENST00000287600 ANKLE2Q86XL3 938 aa23.75■■□□□ 1.39
PDE6D-201ENST00000287600 KIF15Q9NS87 1388 aa23.73■■□□□ 1.39
PDE6D-201ENST00000287600 NPHP4O75161 1426 aaPredicted RBP23.72■■□□□ 1.39
PDE6D-201ENST00000287600 PRDM15P57071 1507 aaPredicted RBP23.72■■□□□ 1.39
PDE6D-201ENST00000287600 IQGAP1P46940 1657 aa23.72■■□□□ 1.39
PDE6D-201ENST00000287600 ABCC5O15440 1437 aa23.71■■□□□ 1.39
PDE6D-201ENST00000287600 ERBINQ96RT1 1412 aa23.71■■□□□ 1.39
PDE6D-201ENST00000287600 VWDEQ8N2E2 1590 aa23.7■■□□□ 1.38
PDE6D-201ENST00000287600 MED14O60244 1454 aa23.7■■□□□ 1.38
PDE6D-201ENST00000287600 CFAP65Q6ZU64 1925 aaKnown RBP23.7■■□□□ 1.38
PDE6D-201ENST00000287600 DAPK1P53355 1430 aa23.68■■□□□ 1.38
PDE6D-201ENST00000287600 FGD6Q6ZV73 1430 aa23.67■■□□□ 1.38
PDE6D-201ENST00000287600 UBR1Q8IWV7 1749 aa23.67■■□□□ 1.38
PDE6D-201ENST00000287600 RRP7BPQ9NSQ0 103 aa23.66■■□□□ 1.38
PDE6D-201ENST00000287600 ILDR2Q71H61 639 aa23.65■■□□□ 1.38
PDE6D-201ENST00000287600 SCAF1Q9H7N4 1312 aaKnown RBP23.64■■□□□ 1.38
PDE6D-201ENST00000287600 ARHGAP31Q2M1Z3 1444 aa23.62■■□□□ 1.37
PDE6D-201ENST00000287600 TOM1O60784 492 aa23.6■■□□□ 1.37
PDE6D-201ENST00000287600 PIP4K2BP78356 416 aa23.6■■□□□ 1.37
PDE6D-201ENST00000287600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.6■■□□□ 1.37
PDE6D-201ENST00000287600 KANK1Q14678 1352 aa23.59■■□□□ 1.37
PDE6D-201ENST00000287600 ANKRD30AQ9BXX3 1397 aa23.59■■□□□ 1.37
PDE6D-201ENST00000287600 SYNMO15061 1565 aa23.59■■□□□ 1.37
PDE6D-201ENST00000287600 STRCP1A6NGW2 1772 aa23.58■■□□□ 1.37
PDE6D-201ENST00000287600 SCAF11Q99590 1463 aaKnown RBP23.58■■□□□ 1.37
PDE6D-201ENST00000287600 PIK3C2BO00750 1634 aa23.56■■□□□ 1.36
PDE6D-201ENST00000287600 CHIC2Q9UKJ5 165 aa23.56■■□□□ 1.36
PDE6D-201ENST00000287600 SLIT1O75093 1534 aa23.55■■□□□ 1.36
PDE6D-201ENST00000287600 ARHGAP23Q9P227 1491 aa23.54■■□□□ 1.36
PDE6D-201ENST00000287600 LMTK2Q8IWU2 1503 aa23.54■■□□□ 1.36
PDE6D-201ENST00000287600 SOCS7O14512 581 aa23.52■■□□□ 1.36
PDE6D-201ENST00000287600 HSPA1LP34931 641 aa23.52■■□□□ 1.36
PDE6D-201ENST00000287600 LRRC7Q96NW7 1537 aa23.52■■□□□ 1.36
PDE6D-201ENST00000287600 ALKQ9UM73 1620 aa23.51■■□□□ 1.35
PDE6D-201ENST00000287600 ADGRL2O95490 1459 aa23.5■■□□□ 1.35
PDE6D-201ENST00000287600 EFCAB6Q5THR3 1501 aa23.49■■□□□ 1.35
PDE6D-201ENST00000287600 KDM5AP29375 1690 aaKnown RBP23.49■■□□□ 1.35
PDE6D-201ENST00000287600 TXNDC2Q86VQ3 553 aa23.49■■□□□ 1.35
PDE6D-201ENST00000287600 LTKP29376 864 aa23.48■■□□□ 1.35
PDE6D-201ENST00000287600 FAM50AQ14320 339 aaKnown RBP23.48■■□□□ 1.35
PDE6D-201ENST00000287600 STAG3Q9UJ98 1225 aa23.48■■□□□ 1.35
PDE6D-201ENST00000287600 EID1Q9Y6B2 187 aa23.48■■□□□ 1.35
PDE6D-201ENST00000287600 MED1Q15648 1581 aaPredicted RBP23.47■■□□□ 1.35
PDE6D-201ENST00000287600 PPARGC1BQ86YN6 1023 aaKnown RBP23.46■■□□□ 1.35
PDE6D-201ENST00000287600 TMEM2Q9UHN6 1383 aa23.45■■□□□ 1.34
PDE6D-201ENST00000287600 ADGRB3O60242 1522 aa23.43■■□□□ 1.34
PDE6D-201ENST00000287600 NOS1P29475 1434 aa23.41■■□□□ 1.34
PDE6D-201ENST00000287600 ANKRD50Q9ULJ7 1429 aa23.41■■□□□ 1.34
PDE6D-201ENST00000287600 XIRP1Q702N8 1843 aaKnown RBP23.4■■□□□ 1.34
PDE6D-201ENST00000287600 IDI1Q13907 227 aa23.4■■□□□ 1.34
PDE6D-201ENST00000287600 TET3O43151 1660 aa23.38■■□□□ 1.33
PDE6D-201ENST00000287600 RPRD2Q5VT52 1461 aaKnown RBP23.37■■□□□ 1.33
PDE6D-201ENST00000287600 GCC2Q8IWJ2 1684 aa23.35■■□□□ 1.33
PDE6D-201ENST00000287600 UNC13BO14795 1591 aa23.35■■□□□ 1.33
PDE6D-201ENST00000287600 SLC52A1Q9NWF4 448 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms