RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 CFDP1Q9UEE9 299 aaPredicted RBP16.28■□□□□ 0.2
SMARCA5-201ENST00000283131 PMFBP1Q8TBY8 1022 aa16.28■□□□□ 0.2
SMARCA5-201ENST00000283131 ZNF592Q92610 1267 aa16.28■□□□□ 0.2
SMARCA5-201ENST00000283131 ZRSR2Q15696 482 aaKnown RBP16.28■□□□□ 0.2
SMARCA5-201ENST00000283131 HOOK1Q9UJC3 728 aaKnown RBP16.28■□□□□ 0.2
SMARCA5-201ENST00000283131 ATP6V1DQ9Y5K8 247 aa16.28■□□□□ 0.2
SMARCA5-201ENST00000283131 TRHP20396 242 aaPredicted RBP16.27■□□□□ 0.2
SMARCA5-201ENST00000283131 ACBD3Q9H3P7 528 aa16.27■□□□□ 0.2
SMARCA5-201ENST00000283131 CCDC173Q0VFZ6 552 aa16.26■□□□□ 0.19
SMARCA5-201ENST00000283131 ZFYVE27Q5T4F4 411 aa16.26■□□□□ 0.19
SMARCA5-201ENST00000283131 CPLX2Q6PUV4 134 aaKnown RBP16.26■□□□□ 0.19
SMARCA5-201ENST00000283131 TRIM29Q14134 588 aa16.26■□□□□ 0.19
SMARCA5-201ENST00000283131 NAP1L1P55209 391 aaKnown RBP16.26■□□□□ 0.19
SMARCA5-201ENST00000283131 LRRFIP1Q32MZ4 808 aaKnown RBP16.25■□□□□ 0.19
SMARCA5-201ENST00000283131 HSP90AB2PQ58FF8 381 aa16.25■□□□□ 0.19
SMARCA5-201ENST00000283131 HOMER1Q86YM7 354 aa16.25■□□□□ 0.19
SMARCA5-201ENST00000283131 SAFB2Q14151 953 aaKnown RBP eCLIP16.25■□□□□ 0.19
SMARCA5-201ENST00000283131 APPP05067 770 aa16.24■□□□□ 0.19
SMARCA5-201ENST00000283131 SLC4A10Q6U841 1118 aa16.23■□□□□ 0.19
SMARCA5-201ENST00000283131 MYO6Q9UM54 1294 aa16.23■□□□□ 0.19
SMARCA5-201ENST00000283131 FOXD4L5Q5VV16 416 aaPredicted RBP16.23■□□□□ 0.19
SMARCA5-201ENST00000283131 MCTP1Q6DN14 999 aa16.23■□□□□ 0.19
SMARCA5-201ENST00000283131 FOXD4L4Q8WXT5 416 aaPredicted RBP16.23■□□□□ 0.19
SMARCA5-201ENST00000283131 FOXD4L1Q9NU39 408 aa16.22■□□□□ 0.19
SMARCA5-201ENST00000283131 DDX11L8A8MPP1 907 aa16.22■□□□□ 0.19
SMARCA5-201ENST00000283131 MLECQ14165 292 aa16.22■□□□□ 0.19
SMARCA5-201ENST00000283131 DHX16O60231 1041 aaKnown RBP16.21■□□□□ 0.19
SMARCA5-201ENST00000283131 EPS15P42566 896 aa16.2■□□□□ 0.18
SMARCA5-201ENST00000283131 HSP90B2PQ58FF3 399 aa16.2■□□□□ 0.18
SMARCA5-201ENST00000283131 H0YHG0 523 aa16.2■□□□□ 0.18
SMARCA5-201ENST00000283131 U2AF1L5P0DN76 240 aaPredicted RBP16.2■□□□□ 0.18
SMARCA5-201ENST00000283131 U2AF1Q01081 240 aaKnown RBP eCLIP16.2■□□□□ 0.18
SMARCA5-201ENST00000283131 WWC2Q6AWC2 1192 aa16.2■□□□□ 0.18
SMARCA5-201ENST00000283131 MSH5O43196 834 aa16.19■□□□□ 0.18
SMARCA5-201ENST00000283131 NEXNQ0ZGT2 675 aa16.19■□□□□ 0.18
SMARCA5-201ENST00000283131 STK26Q9P289 416 aa16.18■□□□□ 0.18
SMARCA5-201ENST00000283131 RSPH6AQ9H0K4 717 aa16.18■□□□□ 0.18
SMARCA5-201ENST00000283131 PLCD4Q9BRC7 762 aa16.18■□□□□ 0.18
SMARCA5-201ENST00000283131 SMC4Q9NTJ3 1288 aa16.18■□□□□ 0.18
SMARCA5-201ENST00000283131 ARGLU1Q9NWB6 273 aaPredicted RBP16.18■□□□□ 0.18
SMARCA5-201ENST00000283131 OFD1O75665 1012 aa16.16■□□□□ 0.18
SMARCA5-201ENST00000283131 VSIG10Q8N0Z9 540 aa16.16■□□□□ 0.18
SMARCA5-201ENST00000283131 DCAF11Q8TEB1 546 aa16.15■□□□□ 0.18
SMARCA5-201ENST00000283131 NEFHP12036 1026 aa16.15■□□□□ 0.18
SMARCA5-201ENST00000283131 DCAF8L1A6NGE4 600 aa16.15■□□□□ 0.18
SMARCA5-201ENST00000283131 STK11IPQ8N1F8 1099 aa16.14■□□□□ 0.17
SMARCA5-201ENST00000283131 DDX49Q9Y6V7 483 aaKnown RBP16.14■□□□□ 0.17
SMARCA5-201ENST00000283131 VPS37DQ86XT2 251 aa16.13■□□□□ 0.17
SMARCA5-201ENST00000283131 CWC15Q9P013 229 aaKnown RBP16.13■□□□□ 0.17
SMARCA5-201ENST00000283131 RILPL2Q969X0 211 aa16.13■□□□□ 0.17
SMARCA5-201ENST00000283131 KTN1Q86UP2 1357 aaKnown RBP16.13■□□□□ 0.17
SMARCA5-201ENST00000283131 SKOR2Q2VWA4 1001 aaPredicted RBP16.13■□□□□ 0.17
SMARCA5-201ENST00000283131 RCAN3Q9UKA8 241 aa16.12■□□□□ 0.17
SMARCA5-201ENST00000283131 CPLX1O14810 134 aa16.12■□□□□ 0.17
SMARCA5-201ENST00000283131 FOXD4L6Q3SYB3 417 aaPredicted RBP16.12■□□□□ 0.17
SMARCA5-201ENST00000283131 FOXD4L3Q6VB84 417 aaPredicted RBP16.12■□□□□ 0.17
SMARCA5-201ENST00000283131 MNS1Q8NEH6 495 aa16.12■□□□□ 0.17
SMARCA5-201ENST00000283131 LMOD3Q0VAK6 560 aa16.11■□□□□ 0.17
SMARCA5-201ENST00000283131 ANKRD18AQ8IVF6 992 aa16.11■□□□□ 0.17
SMARCA5-201ENST00000283131 ERICH2A1L162 156 aa16.11■□□□□ 0.17
SMARCA5-201ENST00000283131 FBXW7Q969H0 707 aa16.1■□□□□ 0.17
SMARCA5-201ENST00000283131 TRDNQ13061 729 aa16.1■□□□□ 0.17
SMARCA5-201ENST00000283131 CAGE1Q8TC20 777 aa16.1■□□□□ 0.17
SMARCA5-201ENST00000283131 TMEM132AQ24JP5 1023 aa16.1■□□□□ 0.17
SMARCA5-201ENST00000283131 DCAF1Q9Y4B6 1507 aa16.1■□□□□ 0.17
SMARCA5-201ENST00000283131 ZCCHC6Q5VYS8 1495 aaKnown RBP16.1■□□□□ 0.17
SMARCA5-201ENST00000283131 CCDC97Q96F63 343 aaPredicted RBP16.09■□□□□ 0.17
SMARCA5-201ENST00000283131 RBM19Q9Y4C8 960 aaKnown RBP16.09■□□□□ 0.17
SMARCA5-201ENST00000283131 ERCC4Q92889 916 aaPredicted RBP16.09■□□□□ 0.17
SMARCA5-201ENST00000283131 SEPT7Q16181 437 aaKnown RBP16.09■□□□□ 0.17
SMARCA5-201ENST00000283131 SAMD1Q6SPF0 538 aaPredicted RBP16.09■□□□□ 0.17
SMARCA5-201ENST00000283131 ANKRD62A6NC57 917 aa16.07■□□□□ 0.16
SMARCA5-201ENST00000283131 CLIP1P30622 1438 aa16.07■□□□□ 0.16
SMARCA5-201ENST00000283131 AMPHP49418 695 aa16.07■□□□□ 0.16
SMARCA5-201ENST00000283131 RUFY2Q8WXA3 655 aa16.07■□□□□ 0.16
SMARCA5-201ENST00000283131 BICD2Q8TD16 824 aa16.07■□□□□ 0.16
SMARCA5-201ENST00000283131 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.07■□□□□ 0.16
SMARCA5-201ENST00000283131 DIAPH3Q9NSV4 1193 aa16.06■□□□□ 0.16
SMARCA5-201ENST00000283131 NFXL1Q6ZNB6 911 aa16.06■□□□□ 0.16
SMARCA5-201ENST00000283131 SAFBQ15424 915 aaKnown RBP eCLIP16.06■□□□□ 0.16
SMARCA5-201ENST00000283131 HSP90AB3PQ58FF7 597 aa16.06■□□□□ 0.16
SMARCA5-201ENST00000283131 EZRP15311 586 aaKnown RBP16.05■□□□□ 0.16
SMARCA5-201ENST00000283131 SASS6Q6UVJ0 657 aa16.05■□□□□ 0.16
SMARCA5-201ENST00000283131 TSPYL1Q9H0U9 437 aa16.05■□□□□ 0.16
SMARCA5-201ENST00000283131 CCAR1Q8IX12 1150 aaKnown RBP16.05■□□□□ 0.16
SMARCA5-201ENST00000283131 SYCP1Q15431 976 aa16.05■□□□□ 0.16
SMARCA5-201ENST00000283131 ZKSCAN1P17029 563 aaPredicted RBP16.04■□□□□ 0.16
SMARCA5-201ENST00000283131 SKIDA1Q1XH10 827 aa16.04■□□□□ 0.16
SMARCA5-201ENST00000283131 ERLIN2O94905 339 aa16.04■□□□□ 0.16
SMARCA5-201ENST00000283131 EVA1CP58658 441 aa16.04■□□□□ 0.16
SMARCA5-201ENST00000283131 FAM13BQ9NYF5 915 aa16.04■□□□□ 0.16
SMARCA5-201ENST00000283131 GOLGA6L7A0A1B0GV03 622 aa16.03■□□□□ 0.16
SMARCA5-201ENST00000283131 NGDNQ8NEJ9 315 aaKnown RBP16.03■□□□□ 0.16
SMARCA5-201ENST00000283131 IPO9Q96P70 1041 aaKnown RBP16.02■□□□□ 0.15
SMARCA5-201ENST00000283131 INCENPQ9NQS7 918 aa16.02■□□□□ 0.15
SMARCA5-201ENST00000283131 BRMS1Q9HCU9 246 aa16.01■□□□□ 0.15
SMARCA5-201ENST00000283131 OLFM4Q6UX06 510 aa16.01■□□□□ 0.15
SMARCA5-201ENST00000283131 LTV1Q96GA3 475 aaPredicted RBP16.01■□□□□ 0.15
SMARCA5-201ENST00000283131 IFT57Q9NWB7 429 aa16.01■□□□□ 0.15
SMARCA5-201ENST00000283131 C1orf141Q5JVX7 400 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms