RNA–Protein interactions for RNA: ENST00000275080.11

CD164-201, Transcript of CD164 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD164, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-201ENST00000275080 SPATA31E1Q6ZUB1 1445 aa12.15□□□□□ -0.46
CD164-201ENST00000275080 GPATCH8Q9UKJ3 1502 aaKnown RBP12.15□□□□□ -0.46
CD164-201ENST00000275080 ABCA8O94911 1581 aa12.15□□□□□ -0.47
CD164-201ENST00000275080 PANK3Q9H999 370 aa12.15□□□□□ -0.47
CD164-201ENST00000275080 RGS3P49796 1198 aa12.14□□□□□ -0.47
CD164-201ENST00000275080 ADGRL2O95490 1459 aa12.14□□□□□ -0.47
CD164-201ENST00000275080 TEX14Q8IWB6 1497 aa12.14□□□□□ -0.47
CD164-201ENST00000275080 CROCC2H7BZ55 1655 aa12.13□□□□□ -0.47
CD164-201ENST00000275080 PDE4AP27815 886 aa12.13□□□□□ -0.47
CD164-201ENST00000275080 CCDC146Q8IYE0 955 aa12.13□□□□□ -0.47
CD164-201ENST00000275080 CRBNQ96SW2 442 aa12.13□□□□□ -0.47
CD164-201ENST00000275080 ANKRD50Q9ULJ7 1429 aa12.13□□□□□ -0.47
CD164-201ENST00000275080 IL27Q8NEV9 243 aa12.12□□□□□ -0.47
CD164-201ENST00000275080 KIF14Q15058 1648 aa12.12□□□□□ -0.47
CD164-201ENST00000275080 SMG6Q86US8 1419 aaKnown RBP12.12□□□□□ -0.47
CD164-201ENST00000275080 ANKRD30AQ9BXX3 1397 aa12.12□□□□□ -0.47
CD164-201ENST00000275080 SHROOM2Q13796 1616 aa12.11□□□□□ -0.47
CD164-201ENST00000275080 MYBBP1AQ9BQG0 1328 aaKnown RBP12.11□□□□□ -0.47
CD164-201ENST00000275080 TNNT2P45379 298 aaPredicted RBP12.11□□□□□ -0.47
CD164-201ENST00000275080 NEUROD2Q15784 382 aa12.11□□□□□ -0.47
CD164-201ENST00000275080 KIAA1107Q9UPP5 1409 aa12.1□□□□□ -0.47
CD164-201ENST00000275080 PZPP20742 1482 aa12.1□□□□□ -0.47
CD164-201ENST00000275080 ADAMTS8Q9UP79 889 aa12.09□□□□□ -0.47
CD164-201ENST00000275080 KIF15Q9NS87 1388 aa12.09□□□□□ -0.47
CD164-201ENST00000275080 SHANK2Q9UPX8 1470 aa12.08□□□□□ -0.47
CD164-201ENST00000275080 NLRP13Q86W25 1043 aa12.08□□□□□ -0.48
CD164-201ENST00000275080 ARXQ96QS3 562 aa12.08□□□□□ -0.48
CD164-201ENST00000275080 CHD1O14646 1710 aa12.07□□□□□ -0.48
CD164-201ENST00000275080 ATP10BO94823 1461 aa12.07□□□□□ -0.48
CD164-201ENST00000275080 ABCC10Q5T3U5 1492 aa12.07□□□□□ -0.48
CD164-201ENST00000275080 CDC42BPAQ5VT25 1732 aa12.07□□□□□ -0.48
CD164-201ENST00000275080 DAXXQ9UER7 740 aaPredicted RBP12.07□□□□□ -0.48
CD164-201ENST00000275080 KTN1Q86UP2 1357 aaKnown RBP12.06□□□□□ -0.48
CD164-201ENST00000275080 BCORL1Q5H9F3 1711 aa12.06□□□□□ -0.48
CD164-201ENST00000275080 RALBP1Q15311 655 aa12.06□□□□□ -0.48
CD164-201ENST00000275080 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.05□□□□□ -0.48
CD164-201ENST00000275080 WDR43Q15061 677 aaKnown RBP eCLIP12.05□□□□□ -0.48
CD164-201ENST00000275080 ANO8Q9HCE9 1232 aaPredicted RBP12.04□□□□□ -0.48
CD164-201ENST00000275080 KNSTRNQ9Y448 316 aa12.03□□□□□ -0.48
CD164-201ENST00000275080 CHGAP10645 457 aaKnown RBP12.03□□□□□ -0.48
CD164-201ENST00000275080 C9orf84Q5VXU9 1444 aa12.03□□□□□ -0.48
CD164-201ENST00000275080 ARHGEF5Q12774 1597 aa12.02□□□□□ -0.48
CD164-201ENST00000275080 POLR1AO95602 1720 aaPredicted RBP12.02□□□□□ -0.48
CD164-201ENST00000275080 PTPRGP23470 1445 aa12.02□□□□□ -0.49
CD164-201ENST00000275080 DISP3Q9P2K9 1392 aa12.02□□□□□ -0.49
CD164-201ENST00000275080 BACH2Q9BYV9 841 aa12.02□□□□□ -0.49
CD164-201ENST00000275080 MBD5Q9P267 1494 aa12.01□□□□□ -0.49
CD164-201ENST00000275080 KDM5DQ9BY66 1539 aa12.01□□□□□ -0.49
CD164-201ENST00000275080 RNF123Q5XPI4 1314 aa12□□□□□ -0.49
CD164-201ENST00000275080 PER1O15534 1290 aaPredicted RBP12□□□□□ -0.49
CD164-201ENST00000275080 TCERG1O14776 1098 aaKnown RBP12□□□□□ -0.49
CD164-201ENST00000275080 RRP7AQ9Y3A4 280 aaKnown RBP12□□□□□ -0.49
CD164-201ENST00000275080 TMF1P82094 1093 aa12□□□□□ -0.49
CD164-201ENST00000275080 FRAT1Q92837 279 aaPredicted RBP12□□□□□ -0.49
CD164-201ENST00000275080 CCDC144AA2RUR9 1427 aa11.99□□□□□ -0.49
CD164-201ENST00000275080 BCAR3O75815 825 aa11.99□□□□□ -0.49
CD164-201ENST00000275080 BCL2L13Q9BXK5 485 aa11.99□□□□□ -0.49
CD164-201ENST00000275080 BRD4O60885 1362 aaPredicted RBP11.99□□□□□ -0.49
CD164-201ENST00000275080 APAF1O14727 1248 aa11.99□□□□□ -0.49
CD164-201ENST00000275080 PREX2Q70Z35 1606 aa11.98□□□□□ -0.49
CD164-201ENST00000275080 CANXP27824 592 aaKnown RBP11.98□□□□□ -0.49
CD164-201ENST00000275080 RSPH4AQ5TD94 716 aa11.97□□□□□ -0.49
CD164-201ENST00000275080 NUTM2DQ5VT03 806 aaPredicted RBP11.97□□□□□ -0.49
CD164-201ENST00000275080 SPRYD3Q8NCJ5 442 aa11.97□□□□□ -0.49
CD164-201ENST00000275080 SPINK5Q9NQ38 1064 aaPredicted RBP11.97□□□□□ -0.49
CD164-201ENST00000275080 CLASP1Q7Z460 1538 aa11.97□□□□□ -0.49
CD164-201ENST00000275080 BRPF3Q9ULD4 1205 aa11.97□□□□□ -0.49
CD164-201ENST00000275080 ARHGEF12Q9NZN5 1544 aa11.96□□□□□ -0.49
CD164-201ENST00000275080 CCDC141Q6ZP82 1450 aa11.96□□□□□ -0.49
CD164-201ENST00000275080 TESK2Q96S53 571 aa11.96□□□□□ -0.49
CD164-201ENST00000275080 AFAP1Q8N556 730 aa11.95□□□□□ -0.5
CD164-201ENST00000275080 CLUAP1Q96AJ1 413 aa11.95□□□□□ -0.5
CD164-201ENST00000275080 UHRF1BP1Q6BDS2 1440 aa11.95□□□□□ -0.5
CD164-201ENST00000275080 SAMD9LQ8IVG5 1584 aa11.95□□□□□ -0.5
CD164-201ENST00000275080 ARID4BQ4LE39 1312 aaPredicted RBP11.94□□□□□ -0.5
CD164-201ENST00000275080 CDC42BPBQ9Y5S2 1711 aa11.94□□□□□ -0.5
CD164-201ENST00000275080 LRPPRCP42704 1394 aaKnown RBP11.94□□□□□ -0.5
CD164-201ENST00000275080 DMRT2Q9Y5R5 561 aa11.94□□□□□ -0.5
CD164-201ENST00000275080 PPP2R1AP30153 589 aa11.94□□□□□ -0.5
CD164-201ENST00000275080 SAFB2Q14151 953 aaKnown RBP eCLIP11.94□□□□□ -0.5
CD164-201ENST00000275080 SLKQ9H2G2 1235 aaPredicted RBP11.93□□□□□ -0.5
CD164-201ENST00000275080 RALGAPBQ86X10 1494 aa11.93□□□□□ -0.5
CD164-201ENST00000275080 ABCC2Q92887 1545 aa11.92□□□□□ -0.5
CD164-201ENST00000275080 MAST1Q9Y2H9 1570 aa11.92□□□□□ -0.5
CD164-201ENST00000275080 EIF5BO60841 1220 aaKnown RBP11.92□□□□□ -0.5
CD164-201ENST00000275080 GOLGA2Q08379 1002 aa11.92□□□□□ -0.5
CD164-201ENST00000275080 COG6Q9Y2V7 657 aa11.92□□□□□ -0.5
CD164-201ENST00000275080 KDM5CP41229 1560 aa11.92□□□□□ -0.5
CD164-201ENST00000275080 PANK1Q8TE04 598 aa11.92□□□□□ -0.5
CD164-201ENST00000275080 UHRF1BP1LA0JNW5 1464 aa11.91□□□□□ -0.5
CD164-201ENST00000275080 PLEKHH2Q8IVE3 1493 aa11.91□□□□□ -0.5
CD164-201ENST00000275080 PLEKHH1Q9ULM0 1364 aa11.91□□□□□ -0.5
CD164-201ENST00000275080 NFKBIBQ15653 356 aa11.91□□□□□ -0.5
CD164-201ENST00000275080 FRAT2O75474 233 aaPredicted RBP11.91□□□□□ -0.5
CD164-201ENST00000275080 PDE3BQ13370 1112 aa11.91□□□□□ -0.5
CD164-201ENST00000275080 CFAP70Q5T0N1 1121 aa11.9□□□□□ -0.5
CD164-201ENST00000275080 DUSP27Q5VZP5 1158 aa11.9□□□□□ -0.5
CD164-201ENST00000275080 ARHGAP5Q13017 1502 aa11.9□□□□□ -0.51
CD164-201ENST00000275080 PARD3Q8TEW0 1356 aa11.89□□□□□ -0.51
CD164-201ENST00000275080 FAM135AQ9P2D6 1515 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms