RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 CFDP1Q9UEE9 299 aaPredicted RBP14.55□□□□□ -0.08
TPM3-201ENST00000271850 CEP162Q5TB80 1403 aa14.55□□□□□ -0.08
TPM3-201ENST00000271850 CNTLNQ9NXG0 1405 aa14.55□□□□□ -0.08
TPM3-201ENST00000271850 EHBP1L1Q8N3D4 1523 aa14.55□□□□□ -0.08
TPM3-201ENST00000271850 MTUS2Q5JR59 1369 aa14.54□□□□□ -0.08
TPM3-201ENST00000271850 A2MP01023 1474 aa14.54□□□□□ -0.08
TPM3-201ENST00000271850 PLEKHH2Q8IVE3 1493 aa14.53□□□□□ -0.08
TPM3-201ENST00000271850 NCOA1Q15788 1441 aa14.53□□□□□ -0.08
TPM3-201ENST00000271850 CLTCQ00610 1675 aaKnown RBP14.52□□□□□ -0.08
TPM3-201ENST00000271850 PTPRTO14522 1441 aa14.52□□□□□ -0.08
TPM3-201ENST00000271850 ZMYM3Q14202 1370 aa14.52□□□□□ -0.08
TPM3-201ENST00000271850 LTBP4Q8N2S1 1624 aa14.52□□□□□ -0.09
TPM3-201ENST00000271850 NPATQ14207 1427 aa14.51□□□□□ -0.09
TPM3-201ENST00000271850 PTPRKQ15262 1439 aa14.49□□□□□ -0.09
TPM3-201ENST00000271850 CAMSAP1Q5T5Y3 1602 aa14.49□□□□□ -0.09
TPM3-201ENST00000271850 ADGBQ8N7X0 1667 aa14.49□□□□□ -0.09
TPM3-201ENST00000271850 MYO3AQ8NEV4 1616 aa14.48□□□□□ -0.09
TPM3-201ENST00000271850 NCOA2Q15596 1464 aa14.48□□□□□ -0.09
TPM3-201ENST00000271850 ZNF142P52746 1687 aaPredicted RBP14.48□□□□□ -0.09
TPM3-201ENST00000271850 CAMSAP2Q08AD1 1489 aa14.46□□□□□ -0.09
TPM3-201ENST00000271850 SP7Q8TDD2 431 aaPredicted RBP14.46□□□□□ -0.09
TPM3-201ENST00000271850 ESF1Q9H501 851 aaKnown RBP14.46□□□□□ -0.09
TPM3-201ENST00000271850 RTEL1-TNFRSF6BF6WH68 1400 aa14.46□□□□□ -0.09
TPM3-201ENST00000271850 GGT6Q6P531 493 aa14.45□□□□□ -0.1
TPM3-201ENST00000271850 FOXD4L1Q9NU39 408 aa14.45□□□□□ -0.1
TPM3-201ENST00000271850 CEP170BQ9Y4F5 1589 aaPredicted RBP14.45□□□□□ -0.1
TPM3-201ENST00000271850 DHX29Q7Z478 1369 aaKnown RBP14.44□□□□□ -0.1
TPM3-201ENST00000271850 TCOF1Q13428 1488 aaKnown RBP14.44□□□□□ -0.1
TPM3-201ENST00000271850 CCDC141Q6ZP82 1450 aa14.44□□□□□ -0.1
TPM3-201ENST00000271850 NCKAP5LQ9HCH0 1330 aa14.42□□□□□ -0.1
TPM3-201ENST00000271850 SLC4A1APQ9BWU0 796 aaKnown RBP14.42□□□□□ -0.1
TPM3-201ENST00000271850 PLA2R1Q13018 1463 aa14.42□□□□□ -0.1
TPM3-201ENST00000271850 LOC105371045A0A1W2PR82 267 aa14.41□□□□□ -0.1
TPM3-201ENST00000271850 REM2Q8IYK8 340 aaPredicted RBP14.4□□□□□ -0.1
TPM3-201ENST00000271850 ATF5Q9Y2D1 282 aaPredicted RBP14.4□□□□□ -0.1
TPM3-201ENST00000271850 VPS8Q8N3P4 1428 aa14.4□□□□□ -0.1
TPM3-201ENST00000271850 ARHGEF5Q12774 1597 aa14.39□□□□□ -0.11
TPM3-201ENST00000271850 LRRC9Q6ZRR7 1453 aa14.39□□□□□ -0.11
TPM3-201ENST00000271850 DNMT1P26358 1616 aaKnown RBP14.39□□□□□ -0.11
TPM3-201ENST00000271850 ZNF335Q9H4Z2 1342 aaPredicted RBP14.39□□□□□ -0.11
TPM3-201ENST00000271850 FBXO31Q5XUX0 539 aaPredicted RBP14.38□□□□□ -0.11
TPM3-201ENST00000271850 A2ML1A8K2U0 1454 aa14.38□□□□□ -0.11
TPM3-201ENST00000271850 IQSEC2Q5JU85 1478 aa14.38□□□□□ -0.11
TPM3-201ENST00000271850 KDM5DQ9BY66 1539 aa14.37□□□□□ -0.11
TPM3-201ENST00000271850 KANK4Q5T7N3 995 aaPredicted RBP14.37□□□□□ -0.11
TPM3-201ENST00000271850 NEURL4Q96JN8 1562 aa14.37□□□□□ -0.11
TPM3-201ENST00000271850 PZPP20742 1482 aa14.37□□□□□ -0.11
TPM3-201ENST00000271850 KIF3BO15066 747 aa14.36□□□□□ -0.11
TPM3-201ENST00000271850 MROH1Q8NDA8 1641 aa14.34□□□□□ -0.11
TPM3-201ENST00000271850 PIP4P2Q8N4L2 257 aa14.34□□□□□ -0.11
TPM3-201ENST00000271850 FAM135AQ9P2D6 1515 aa14.34□□□□□ -0.11
TPM3-201ENST00000271850 MAST1Q9Y2H9 1570 aa14.34□□□□□ -0.11
TPM3-201ENST00000271850 RNF17Q9BXT8 1623 aaKnown RBP14.33□□□□□ -0.11
TPM3-201ENST00000271850 PKD2Q13563 968 aa14.33□□□□□ -0.12
TPM3-201ENST00000271850 TNRQ92752 1358 aa14.33□□□□□ -0.12
TPM3-201ENST00000271850 MAP3K1Q13233 1512 aa14.32□□□□□ -0.12
TPM3-201ENST00000271850 ILDR2Q71H61 639 aa14.32□□□□□ -0.12
TPM3-201ENST00000271850 ABCC3O15438 1527 aa14.31□□□□□ -0.12
TPM3-201ENST00000271850 RSPH4AQ5TD94 716 aa14.31□□□□□ -0.12
TPM3-201ENST00000271850 POLR1AO95602 1720 aaPredicted RBP14.3□□□□□ -0.12
TPM3-201ENST00000271850 MYOM3Q5VTT5 1437 aa14.29□□□□□ -0.12
TPM3-201ENST00000271850 MIA2Q96PC5 1412 aa14.29□□□□□ -0.12
TPM3-201ENST00000271850 SPATA31D1Q6ZQQ2 1576 aa14.28□□□□□ -0.12
TPM3-201ENST00000271850 WASHC2CQ9Y4E1 1318 aa14.28□□□□□ -0.12
TPM3-201ENST00000271850 EIF2AK4Q9P2K8 1649 aaKnown RBP14.27□□□□□ -0.12
TPM3-201ENST00000271850 VWDEQ8N2E2 1590 aa14.27□□□□□ -0.12
TPM3-201ENST00000271850 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.27□□□□□ -0.123e-7■■□□□ 11.8
TPM3-201ENST00000271850 DISP3Q9P2K9 1392 aa14.26□□□□□ -0.13
TPM3-201ENST00000271850 HAX1O00165 279 aa14.26□□□□□ -0.13
TPM3-201ENST00000271850 ALKQ9UM73 1620 aa14.26□□□□□ -0.13
TPM3-201ENST00000271850 ERVK-7P63135 1459 aa14.25□□□□□ -0.13
TPM3-201ENST00000271850 NLRP1Q9C000 1473 aa14.25□□□□□ -0.13
TPM3-201ENST00000271850 TSPY4P0CV99 314 aa14.25□□□□□ -0.13
TPM3-201ENST00000271850 TSPY10P0CW01 314 aa14.25□□□□□ -0.13
TPM3-201ENST00000271850 ZC3H13Q5T200 1668 aaKnown RBP14.25□□□□□ -0.13
TPM3-201ENST00000271850 UGGT1Q9NYU2 1555 aa14.25□□□□□ -0.13
TPM3-201ENST00000271850 MED14O60244 1454 aa14.25□□□□□ -0.13
TPM3-201ENST00000271850 ABCC5O15440 1437 aa14.24□□□□□ -0.13
TPM3-201ENST00000271850 CEP152O94986 1710 aa14.24□□□□□ -0.13
TPM3-201ENST00000271850 CROCC2H7BZ55 1655 aa14.23□□□□□ -0.13
TPM3-201ENST00000271850 DEPDC5O75140 1603 aa14.23□□□□□ -0.13
TPM3-201ENST00000271850 PITPNM1O00562 1244 aa14.23□□□□□ -0.13
TPM3-201ENST00000271850 SHANK2Q9UPX8 1470 aa14.23□□□□□ -0.13
TPM3-201ENST00000271850 STRCP1A6NGW2 1772 aa14.22□□□□□ -0.13
TPM3-201ENST00000271850 UBAP1LF5GYI3 381 aa14.22□□□□□ -0.13
TPM3-201ENST00000271850 PRDM15P57071 1507 aaPredicted RBP14.21□□□□□ -0.13
TPM3-201ENST00000271850 DUOX2Q9NRD8 1548 aa14.21□□□□□ -0.13
TPM3-201ENST00000271850 PTPN23Q9H3S7 1636 aa14.21□□□□□ -0.13
TPM3-201ENST00000271850 NPHP4O75161 1426 aaPredicted RBP14.21□□□□□ -0.13
TPM3-201ENST00000271850 CPS1P31327 1500 aa14.2□□□□□ -0.14
TPM3-201ENST00000271850 UBR1Q8IWV7 1749 aa14.19□□□□□ -0.14
TPM3-201ENST00000271850 IQGAP1P46940 1657 aa14.19□□□□□ -0.14
TPM3-201ENST00000271850 KIF15Q9NS87 1388 aa14.19□□□□□ -0.14
TPM3-201ENST00000271850 DAPK1P53355 1430 aa14.18□□□□□ -0.14
TPM3-201ENST00000271850 FXR2P51116 673 aaKnown RBP eCLIP14.18□□□□□ -0.142e-6■■■□□ 15.5
TPM3-201ENST00000271850 ANKLE2Q86XL3 938 aa14.18□□□□□ -0.14
TPM3-201ENST00000271850 FGD6Q6ZV73 1430 aa14.17□□□□□ -0.14
TPM3-201ENST00000271850 ERBINQ96RT1 1412 aa14.17□□□□□ -0.14
TPM3-201ENST00000271850 THEMISQ8N1K5 641 aaPredicted RBP14.17□□□□□ -0.14
TPM3-201ENST00000271850 CFAP65Q6ZU64 1925 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms