RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 ARHGEF11O15085 1522 aa22.55■■□□□ 1.2
LRRC56-201ENST00000270115 RALBP1Q15311 655 aa22.54■■□□□ 1.2
LRRC56-201ENST00000270115 CARD11Q9BXL7 1154 aa22.52■■□□□ 1.2
LRRC56-201ENST00000270115 ARID4BQ4LE39 1312 aaPredicted RBP22.52■■□□□ 1.2
LRRC56-201ENST00000270115 NUP160Q12769 1436 aa22.52■■□□□ 1.2
LRRC56-201ENST00000270115 ROCK2O75116 1388 aaKnown RBP22.51■■□□□ 1.19
LRRC56-201ENST00000270115 FAM161AQ3B820 660 aa22.5■■□□□ 1.19
LRRC56-201ENST00000270115 C8orf34Q49A92 452 aa22.5■■□□□ 1.19
LRRC56-201ENST00000270115 ST20-MTHFSA0A0A6YYL1 179 aa22.5■■□□□ 1.19
LRRC56-201ENST00000270115 RGS3P49796 1198 aa22.5■■□□□ 1.19
LRRC56-201ENST00000270115 ZNF644Q9H582 1327 aaPredicted RBP22.49■■□□□ 1.19
LRRC56-201ENST00000270115 PKNOX2Q96KN3 472 aa22.49■■□□□ 1.19
LRRC56-201ENST00000270115 POGKQ9P215 609 aa22.48■■□□□ 1.19
LRRC56-201ENST00000270115 NLRP13Q86W25 1043 aa22.47■■□□□ 1.19
LRRC56-201ENST00000270115 RRAGDQ9NQL2 400 aaPredicted RBP22.47■■□□□ 1.19
LRRC56-201ENST00000270115 KDM2AQ9Y2K7 1162 aa22.47■■□□□ 1.19
LRRC56-201ENST00000270115 PLB1Q6P1J6 1458 aa22.47■■□□□ 1.19
LRRC56-201ENST00000270115 NUP153P49790 1475 aaKnown RBP22.46■■□□□ 1.19
LRRC56-201ENST00000270115 KDM2BQ8NHM5 1336 aa22.46■■□□□ 1.19
LRRC56-201ENST00000270115 KDM5CP41229 1560 aa22.45■■□□□ 1.19
LRRC56-201ENST00000270115 ARXQ96QS3 562 aa22.45■■□□□ 1.18
LRRC56-201ENST00000270115 KTN1Q86UP2 1357 aaKnown RBP22.44■■□□□ 1.18
LRRC56-201ENST00000270115 DAPK1P53355 1430 aa22.43■■□□□ 1.18
LRRC56-201ENST00000270115 CENPQQ7L2Z9 268 aaPredicted RBP22.43■■□□□ 1.18
LRRC56-201ENST00000270115 MBD5Q9P267 1494 aa22.43■■□□□ 1.18
LRRC56-201ENST00000270115 PKD2Q13563 968 aa22.42■■□□□ 1.18
LRRC56-201ENST00000270115 RAPGEF6Q8TEU7 1601 aa22.4■■□□□ 1.18
LRRC56-201ENST00000270115 ABCC5O15440 1437 aa22.4■■□□□ 1.18
LRRC56-201ENST00000270115 CARMIL2Q6F5E8 1435 aa22.4■■□□□ 1.18
LRRC56-201ENST00000270115 CC2D1BQ5T0F9 858 aaKnown RBP22.39■■□□□ 1.18
LRRC56-201ENST00000270115 ROCK1Q13464 1354 aa22.39■■□□□ 1.17
LRRC56-201ENST00000270115 PRG4Q92954 1404 aaPredicted RBP22.38■■□□□ 1.17
LRRC56-201ENST00000270115 PZPP20742 1482 aa22.38■■□□□ 1.17
LRRC56-201ENST00000270115 KIF14Q15058 1648 aa22.36■■□□□ 1.17
LRRC56-201ENST00000270115 SLKQ9H2G2 1235 aaPredicted RBP22.36■■□□□ 1.17
LRRC56-201ENST00000270115 ZNF777Q9ULD5 760 aaPredicted RBP22.35■■□□□ 1.17
LRRC56-201ENST00000270115 VSIG10Q8N0Z9 540 aa22.34■■□□□ 1.17
LRRC56-201ENST00000270115 NAP1L5Q96NT1 182 aaPredicted RBP22.33■■□□□ 1.17
LRRC56-201ENST00000270115 KIAA1107Q9UPP5 1409 aa22.33■■□□□ 1.16
LRRC56-201ENST00000270115 GLIPR1L2Q4G1C9 344 aa22.33■■□□□ 1.16
LRRC56-201ENST00000270115 PARD3Q8TEW0 1356 aa22.32■■□□□ 1.16
LRRC56-201ENST00000270115 CHD1O14646 1710 aa22.31■■□□□ 1.16
LRRC56-201ENST00000270115 RALGAPBQ86X10 1494 aa22.29■■□□□ 1.16
LRRC56-201ENST00000270115 CFDP1Q9UEE9 299 aaPredicted RBP22.28■■□□□ 1.16
LRRC56-201ENST00000270115 ZMYND15Q9H091 742 aa22.27■■□□□ 1.16
LRRC56-201ENST00000270115 L1TD1Q5T7N2 865 aaKnown RBP22.27■■□□□ 1.15
LRRC56-201ENST00000270115 PER1O15534 1290 aaPredicted RBP22.26■■□□□ 1.15
LRRC56-201ENST00000270115 SEC24BO95487 1268 aa22.26■■□□□ 1.15
LRRC56-201ENST00000270115 DNMT1P26358 1616 aaKnown RBP22.25■■□□□ 1.15
LRRC56-201ENST00000270115 ADAMTS8Q9UP79 889 aa22.25■■□□□ 1.15
LRRC56-201ENST00000270115 PTPRGP23470 1445 aa22.24■■□□□ 1.15
LRRC56-201ENST00000270115 USP19O94966 1318 aa22.24■■□□□ 1.15
LRRC56-201ENST00000270115 TROQ12816 1431 aaPredicted RBP22.24■■□□□ 1.15
LRRC56-201ENST00000270115 PNNQ9H307 717 aaKnown RBP22.23■■□□□ 1.15
LRRC56-201ENST00000270115 BLMP54132 1417 aaPredicted RBP22.23■■□□□ 1.15
LRRC56-201ENST00000270115 UHRF1BP1Q6BDS2 1440 aa22.23■■□□□ 1.15
LRRC56-201ENST00000270115 DUSP27Q5VZP5 1158 aa22.22■■□□□ 1.15
LRRC56-201ENST00000270115 ATP10BO94823 1461 aa22.22■■□□□ 1.15
LRRC56-201ENST00000270115 HSP90AA2PQ14568 343 aaPredicted RBP22.21■■□□□ 1.15
LRRC56-201ENST00000270115 GZF1Q9H116 711 aaPredicted RBP22.21■■□□□ 1.15
LRRC56-201ENST00000270115 PLEKHD1A6NEE1 506 aa22.21■■□□□ 1.15
LRRC56-201ENST00000270115 ABCA8O94911 1581 aa22.2■■□□□ 1.14
LRRC56-201ENST00000270115 XRCC6P12956 609 aaKnown RBP eCLIP22.2■■□□□ 1.14
LRRC56-201ENST00000270115 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.2■■□□□ 1.14
LRRC56-201ENST00000270115 PANK2Q9BZ23 570 aa22.2■■□□□ 1.14
LRRC56-201ENST00000270115 BECN1Q14457 450 aa22.2■■□□□ 1.14
LRRC56-201ENST00000270115 E9PCH4 1651 aa22.19■■□□□ 1.14
LRRC56-201ENST00000270115 ERCC6L2Q5T890 1561 aa22.19■■□□□ 1.14
LRRC56-201ENST00000270115 PANK3Q9H999 370 aa22.19■■□□□ 1.14
LRRC56-201ENST00000270115 PLEKHH1Q9ULM0 1364 aa22.18■■□□□ 1.14
LRRC56-201ENST00000270115 HSP90AA1P07900 732 aaKnown RBP22.18■■□□□ 1.14
LRRC56-201ENST00000270115 ZMYM4Q5VZL5 1548 aa22.18■■□□□ 1.14
LRRC56-201ENST00000270115 SPRYD3Q8NCJ5 442 aa22.17■■□□□ 1.14
LRRC56-201ENST00000270115 IGHDP01880 384 aa22.17■■□□□ 1.14
LRRC56-201ENST00000270115 GOLGA6L3A6NEY3 463 aa22.16■■□□□ 1.14
LRRC56-201ENST00000270115 GPATCH8Q9UKJ3 1502 aaKnown RBP22.16■■□□□ 1.14
LRRC56-201ENST00000270115 NUP155O75694 1391 aa22.15■■□□□ 1.14
LRRC56-201ENST00000270115 GOLGA2Q08379 1002 aa22.15■■□□□ 1.14
LRRC56-201ENST00000270115 NBPF1Q3BBV0 1214 aa22.14■■□□□ 1.14
LRRC56-201ENST00000270115 BCAR3O75815 825 aa22.13■■□□□ 1.13
LRRC56-201ENST00000270115 WDR43Q15061 677 aaKnown RBP eCLIP22.12■■□□□ 1.13
LRRC56-201ENST00000270115 CLCN1P35523 988 aa22.11■■□□□ 1.13
LRRC56-201ENST00000270115 ANTXR1Q9H6X2 564 aa22.11■■□□□ 1.13
LRRC56-201ENST00000270115 PLEKHH2Q8IVE3 1493 aa22.11■■□□□ 1.13
LRRC56-201ENST00000270115 RGL3Q3MIN7 710 aa22.1■■□□□ 1.13
LRRC56-201ENST00000270115 CAMSAP2Q08AD1 1489 aa22.1■■□□□ 1.13
LRRC56-201ENST00000270115 RRP9O43818 475 aaKnown RBP22.09■■□□□ 1.13
LRRC56-201ENST00000270115 DISP3Q9P2K9 1392 aa22.08■■□□□ 1.13
LRRC56-201ENST00000270115 CCDC146Q8IYE0 955 aa22.07■■□□□ 1.12
LRRC56-201ENST00000270115 ANKRD50Q9ULJ7 1429 aa22.07■■□□□ 1.12
LRRC56-201ENST00000270115 SPINK5Q9NQ38 1064 aaPredicted RBP22.06■■□□□ 1.12
LRRC56-201ENST00000270115 HNRNPMP52272 730 aaKnown RBP eCLIP22.06■■□□□ 1.12
LRRC56-201ENST00000270115 TBC1D2Q9BYX2 928 aa22.06■■□□□ 1.12
LRRC56-201ENST00000270115 INSRP06213 1382 aa22.06■■□□□ 1.12
LRRC56-201ENST00000270115 SHROOM2Q13796 1616 aa22.06■■□□□ 1.12
LRRC56-201ENST00000270115 SLFN5Q08AF3 891 aa22.05■■□□□ 1.12
LRRC56-201ENST00000270115 ARHGEF12Q9NZN5 1544 aa22.05■■□□□ 1.12
LRRC56-201ENST00000270115 FSD2A1L4K1 749 aa22.05■■□□□ 1.12
LRRC56-201ENST00000270115 ANKRD30AQ9BXX3 1397 aa22.04■■□□□ 1.12
LRRC56-201ENST00000270115 PLEKHG5O94827 1062 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms