RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 SOX12O15370 315 aa19.01■□□□□ 0.63
TNFRSF11A-201ENST00000269485 CHD1O14646 1710 aa19.01■□□□□ 0.63
TNFRSF11A-201ENST00000269485 TRAK1Q9UPV9 953 aa19■□□□□ 0.63
TNFRSF11A-201ENST00000269485 TMEM132EQ6IEE7 984 aa18.99■□□□□ 0.63
TNFRSF11A-201ENST00000269485 NPM2Q86SE8 214 aaKnown RBP18.99■□□□□ 0.63
TNFRSF11A-201ENST00000269485 PLEKHH2Q8IVE3 1493 aa18.99■□□□□ 0.63
TNFRSF11A-201ENST00000269485 TCOF1Q13428 1488 aaKnown RBP18.98■□□□□ 0.63
TNFRSF11A-201ENST00000269485 CCDC144AA2RUR9 1427 aa18.98■□□□□ 0.63
TNFRSF11A-201ENST00000269485 TRHP20396 242 aaPredicted RBP18.97■□□□□ 0.63
TNFRSF11A-201ENST00000269485 SYCP2Q9BX26 1530 aa18.96■□□□□ 0.63
TNFRSF11A-201ENST00000269485 KIAA1107Q9UPP5 1409 aa18.96■□□□□ 0.63
TNFRSF11A-201ENST00000269485 DENND4BO75064 1496 aaPredicted RBP18.96■□□□□ 0.63
TNFRSF11A-201ENST00000269485 ROCK1Q13464 1354 aa18.95■□□□□ 0.62
TNFRSF11A-201ENST00000269485 PRKRIP1Q9H875 184 aaPredicted RBP18.95■□□□□ 0.62
TNFRSF11A-201ENST00000269485 TRAPPC8Q9Y2L5 1435 aa18.95■□□□□ 0.62
TNFRSF11A-201ENST00000269485 SLC24A1O60721 1099 aa18.94■□□□□ 0.62
TNFRSF11A-201ENST00000269485 FAM69CQ0P6D2 419 aa18.94■□□□□ 0.62
TNFRSF11A-201ENST00000269485 ESF1Q9H501 851 aaKnown RBP18.94■□□□□ 0.62
TNFRSF11A-201ENST00000269485 CCDC7Q96M83 1385 aa18.93■□□□□ 0.62
TNFRSF11A-201ENST00000269485 CCDC146Q8IYE0 955 aa18.93■□□□□ 0.62
TNFRSF11A-201ENST00000269485 RSPH4AQ5TD94 716 aa18.92■□□□□ 0.62
TNFRSF11A-201ENST00000269485 WASHC2CQ9Y4E1 1318 aa18.91■□□□□ 0.62
TNFRSF11A-201ENST00000269485 PANK3Q9H999 370 aa18.9■□□□□ 0.62
TNFRSF11A-201ENST00000269485 PZPP20742 1482 aa18.89■□□□□ 0.62
TNFRSF11A-201ENST00000269485 CCDC141Q6ZP82 1450 aa18.89■□□□□ 0.61
TNFRSF11A-201ENST00000269485 CFAP70Q5T0N1 1121 aa18.88■□□□□ 0.61
TNFRSF11A-201ENST00000269485 PAK3O75914 559 aaPredicted RBP18.87■□□□□ 0.61
TNFRSF11A-201ENST00000269485 ABCA8O94911 1581 aa18.87■□□□□ 0.61
TNFRSF11A-201ENST00000269485 RPRD2Q5VT52 1461 aaKnown RBP18.86■□□□□ 0.61
TNFRSF11A-201ENST00000269485 PLIN1O60240 522 aa18.86■□□□□ 0.61
TNFRSF11A-201ENST00000269485 KNSTRNQ9Y448 316 aa18.86■□□□□ 0.61
TNFRSF11A-201ENST00000269485 DNMT1P26358 1616 aaKnown RBP18.86■□□□□ 0.61
TNFRSF11A-201ENST00000269485 CCER2I3L3R5 266 aa18.85■□□□□ 0.61
TNFRSF11A-201ENST00000269485 ABCC10Q5T3U5 1492 aa18.84■□□□□ 0.61
TNFRSF11A-201ENST00000269485 ZBTB7CA1YPR0 619 aa18.82■□□□□ 0.6
TNFRSF11A-201ENST00000269485 WDR43Q15061 677 aaKnown RBP eCLIP18.82■□□□□ 0.6
TNFRSF11A-201ENST00000269485 RRP7AQ9Y3A4 280 aaKnown RBP18.82■□□□□ 0.6
TNFRSF11A-201ENST00000269485 NOP58Q9Y2X3 529 aaKnown RBP18.81■□□□□ 0.6
TNFRSF11A-201ENST00000269485 TTC37Q6PGP7 1564 aa18.81■□□□□ 0.6
TNFRSF11A-201ENST00000269485 LAS1LQ9Y4W2 734 aaKnown RBP18.81■□□□□ 0.6
TNFRSF11A-201ENST00000269485 ASXL2Q76L83 1435 aa18.8■□□□□ 0.6
TNFRSF11A-201ENST00000269485 KANK1Q14678 1352 aa18.8■□□□□ 0.6
TNFRSF11A-201ENST00000269485 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.79■□□□□ 0.6
TNFRSF11A-201ENST00000269485 MBD5Q9P267 1494 aa18.79■□□□□ 0.6
TNFRSF11A-201ENST00000269485 FANCAO15360 1455 aa18.78■□□□□ 0.6
TNFRSF11A-201ENST00000269485 CFAP65Q6ZU64 1925 aaKnown RBP18.77■□□□□ 0.6
TNFRSF11A-201ENST00000269485 CANXP27824 592 aaKnown RBP18.77■□□□□ 0.6
TNFRSF11A-201ENST00000269485 SRPK2P78362 688 aaKnown RBP18.77■□□□□ 0.6
TNFRSF11A-201ENST00000269485 CDCA7LQ96GN5 454 aa18.77■□□□□ 0.6
TNFRSF11A-201ENST00000269485 ABCC2Q92887 1545 aa18.77■□□□□ 0.6
TNFRSF11A-201ENST00000269485 ARHGEF12Q9NZN5 1544 aa18.77■□□□□ 0.6
TNFRSF11A-201ENST00000269485 TMF1P82094 1093 aa18.77■□□□□ 0.6
TNFRSF11A-201ENST00000269485 SKAP1Q86WV1 359 aa18.77■□□□□ 0.59
TNFRSF11A-201ENST00000269485 PLCH2O75038 1416 aa18.76■□□□□ 0.59
TNFRSF11A-201ENST00000269485 POGKQ9P215 609 aa18.75■□□□□ 0.59
TNFRSF11A-201ENST00000269485 ADGRL1O94910 1474 aa18.75■□□□□ 0.59
TNFRSF11A-201ENST00000269485 CNTLNQ9NXG0 1405 aa18.75■□□□□ 0.59
TNFRSF11A-201ENST00000269485 ITSN2Q9NZM3 1697 aa18.75■□□□□ 0.59
TNFRSF11A-201ENST00000269485 CDC42BPAQ5VT25 1732 aa18.74■□□□□ 0.59
TNFRSF11A-201ENST00000269485 SAMD9LQ8IVG5 1584 aa18.74■□□□□ 0.59
TNFRSF11A-201ENST00000269485 CD109Q6YHK3 1445 aa18.73■□□□□ 0.59
TNFRSF11A-201ENST00000269485 U2SURPO15042 1029 aaKnown RBP18.73■□□□□ 0.59
TNFRSF11A-201ENST00000269485 C14orf37Q86TY3 774 aa18.72■□□□□ 0.59
TNFRSF11A-201ENST00000269485 FBXO31Q5XUX0 539 aaPredicted RBP18.72■□□□□ 0.59
TNFRSF11A-201ENST00000269485 MINK1Q8N4C8 1332 aaPredicted RBP18.72■□□□□ 0.59
TNFRSF11A-201ENST00000269485 FANCIQ9NVI1 1328 aa18.72■□□□□ 0.59
TNFRSF11A-201ENST00000269485 ADGRF5Q8IZF2 1346 aa18.71■□□□□ 0.59
TNFRSF11A-201ENST00000269485 TEX14Q8IWB6 1497 aa18.7■□□□□ 0.58
TNFRSF11A-201ENST00000269485 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.7■□□□□ 0.58
TNFRSF11A-201ENST00000269485 GCC2Q8IWJ2 1684 aa18.7■□□□□ 0.58
TNFRSF11A-201ENST00000269485 ANP32AP39687 249 aaKnown RBP18.7■□□□□ 0.58
TNFRSF11A-201ENST00000269485 FBLN1P23142 703 aa18.69■□□□□ 0.58
TNFRSF11A-201ENST00000269485 FAM135AQ9P2D6 1515 aa18.69■□□□□ 0.58
TNFRSF11A-201ENST00000269485 FRAT1Q92837 279 aaPredicted RBP18.69■□□□□ 0.58
TNFRSF11A-201ENST00000269485 BCL2L13Q9BXK5 485 aa18.69■□□□□ 0.58
TNFRSF11A-201ENST00000269485 RBM33Q96EV2 1170 aaKnown RBP18.68■□□□□ 0.58
TNFRSF11A-201ENST00000269485 ZBTB47Q9UFB7 747 aaPredicted RBP18.68■□□□□ 0.58
TNFRSF11A-201ENST00000269485 UBE2Q2Q8WVN8 375 aa18.67■□□□□ 0.58
TNFRSF11A-201ENST00000269485 WDR7Q9Y4E6 1490 aa18.67■□□□□ 0.58
TNFRSF11A-201ENST00000269485 SLC12A5Q9H2X9 1139 aa18.66■□□□□ 0.58
TNFRSF11A-201ENST00000269485 CABP2Q9NPB3 220 aa18.66■□□□□ 0.58
TNFRSF11A-201ENST00000269485 KDM5BQ9UGL1 1544 aa18.64■□□□□ 0.57
TNFRSF11A-201ENST00000269485 DISP3Q9P2K9 1392 aa18.63■□□□□ 0.57
TNFRSF11A-201ENST00000269485 BRPF3Q9ULD4 1205 aa18.62■□□□□ 0.57
TNFRSF11A-201ENST00000269485 ZCCHC11Q5TAX3 1644 aaKnown RBP18.61■□□□□ 0.57
TNFRSF11A-201ENST00000269485 ERICH6BQ5W0A0 696 aa18.61■□□□□ 0.57
TNFRSF11A-201ENST00000269485 PKNOX2Q96KN3 472 aa18.61■□□□□ 0.57
TNFRSF11A-201ENST00000269485 ADGRL2O95490 1459 aa18.61■□□□□ 0.57
TNFRSF11A-201ENST00000269485 CDC42BPBQ9Y5S2 1711 aa18.61■□□□□ 0.57
TNFRSF11A-201ENST00000269485 RGS3P49796 1198 aa18.61■□□□□ 0.57
TNFRSF11A-201ENST00000269485 LMOD2Q6P5Q4 547 aa18.61■□□□□ 0.57
TNFRSF11A-201ENST00000269485 NEFMP07197 916 aa18.61■□□□□ 0.57
TNFRSF11A-201ENST00000269485 CLUAP1Q96AJ1 413 aa18.6■□□□□ 0.57
TNFRSF11A-201ENST00000269485 MORC1Q86VD1 984 aa18.6■□□□□ 0.57
TNFRSF11A-201ENST00000269485 KTN1Q86UP2 1357 aaKnown RBP18.59■□□□□ 0.57
TNFRSF11A-201ENST00000269485 TCERG1O14776 1098 aaKnown RBP18.59■□□□□ 0.57
TNFRSF11A-201ENST00000269485 CEBPAP49715 358 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF11A-201ENST00000269485 ADAMTS8Q9UP79 889 aa18.58■□□□□ 0.57
TNFRSF11A-201ENST00000269485 ARXQ96QS3 562 aa18.58■□□□□ 0.56
TNFRSF11A-201ENST00000269485 APAF1O14727 1248 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms