RNA–Protein interactions for RNA: ENST00000265724.7

ABCB1-201, Transcript of ATP binding cassette subfamily B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCB1, Length 4,645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-201ENST00000265724 CHMP4BQ9H444 224 aaKnown RBP12.62□□□□□ -0.39
ABCB1-201ENST00000265724 PCF11O94913 1555 aaKnown RBP12.62□□□□□ -0.39
ABCB1-201ENST00000265724 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.62□□□□□ -0.39
ABCB1-201ENST00000265724 IQGAP2Q13576 1575 aa12.62□□□□□ -0.39
ABCB1-201ENST00000265724 BIVM-ERCC5R4GMW8 1640 aa12.62□□□□□ -0.39
ABCB1-201ENST00000265724 ANP32BQ92688 251 aaKnown RBP12.62□□□□□ -0.39
ABCB1-201ENST00000265724 C9orf84Q5VXU9 1444 aa12.62□□□□□ -0.39
ABCB1-201ENST00000265724 WASHC2AQ641Q2 1341 aa12.61□□□□□ -0.39
ABCB1-201ENST00000265724 PDE3BQ13370 1112 aa12.61□□□□□ -0.39
ABCB1-201ENST00000265724 RTF1Q92541 710 aaKnown RBP12.61□□□□□ -0.39
ABCB1-201ENST00000265724 CUL7Q14999 1698 aa12.6□□□□□ -0.39
ABCB1-201ENST00000265724 MINK1Q8N4C8 1332 aaPredicted RBP12.6□□□□□ -0.39
ABCB1-201ENST00000265724 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.59□□□□□ -0.39
ABCB1-201ENST00000265724 RBM19Q9Y4C8 960 aaKnown RBP12.59□□□□□ -0.39
ABCB1-201ENST00000265724 EVC2Q86UK5 1308 aa12.59□□□□□ -0.39
ABCB1-201ENST00000265724 DAPK1P53355 1430 aa12.59□□□□□ -0.39
ABCB1-201ENST00000265724 SUPT6HQ7KZ85 1726 aaKnown RBP12.59□□□□□ -0.39
ABCB1-201ENST00000265724 NBPF8Q3BBV2 869 aa12.58□□□□□ -0.39
ABCB1-201ENST00000265724 NGDNQ8NEJ9 315 aaKnown RBP12.58□□□□□ -0.4
ABCB1-201ENST00000265724 NAIPQ13075 1403 aa12.58□□□□□ -0.4
ABCB1-201ENST00000265724 ZNF608Q9ULD9 1512 aaPredicted RBP12.58□□□□□ -0.4
ABCB1-201ENST00000265724 RRP7AQ9Y3A4 280 aaKnown RBP12.57□□□□□ -0.4
ABCB1-201ENST00000265724 ZBED9Q6R2W3 1325 aa12.57□□□□□ -0.4
ABCB1-201ENST00000265724 STAC3Q96MF2 364 aa12.57□□□□□ -0.4
ABCB1-201ENST00000265724 PLB1Q6P1J6 1458 aa12.57□□□□□ -0.4
ABCB1-201ENST00000265724 IPO8O15397 1037 aaKnown RBP12.57□□□□□ -0.4
ABCB1-201ENST00000265724 KIAA1107Q9UPP5 1409 aa12.56□□□□□ -0.4
ABCB1-201ENST00000265724 CGNL1Q0VF96 1302 aa12.56□□□□□ -0.4
ABCB1-201ENST00000265724 GRIN2AQ12879 1464 aa12.56□□□□□ -0.4
ABCB1-201ENST00000265724 CALD1Q05682 793 aaKnown RBP12.56□□□□□ -0.4
ABCB1-201ENST00000265724 CASC1Q6TDU7 716 aa12.56□□□□□ -0.4
ABCB1-201ENST00000265724 CENPJQ9HC77 1338 aaPredicted RBP12.55□□□□□ -0.4
ABCB1-201ENST00000265724 CNTLNQ9NXG0 1405 aa12.55□□□□□ -0.4
ABCB1-201ENST00000265724 NBPF1Q3BBV0 1214 aa12.55□□□□□ -0.4
ABCB1-201ENST00000265724 CLUAP1Q96AJ1 413 aa12.55□□□□□ -0.4
ABCB1-201ENST00000265724 SCAPERQ9BY12 1400 aa12.55□□□□□ -0.4
ABCB1-201ENST00000265724 CFAP70Q5T0N1 1121 aa12.54□□□□□ -0.4
ABCB1-201ENST00000265724 TMEM132EQ6IEE7 984 aa12.54□□□□□ -0.4
ABCB1-201ENST00000265724 NOP58Q9Y2X3 529 aaKnown RBP12.54□□□□□ -0.4
ABCB1-201ENST00000265724 ANP32EQ9BTT0 268 aa12.54□□□□□ -0.4
ABCB1-201ENST00000265724 SMC4Q9NTJ3 1288 aa12.54□□□□□ -0.4
ABCB1-201ENST00000265724 ITPRIPQ8IWB1 547 aa12.54□□□□□ -0.4
ABCB1-201ENST00000265724 OS9Q13438 667 aaPredicted RBP12.53□□□□□ -0.4
ABCB1-201ENST00000265724 MAP3K1Q13233 1512 aa12.53□□□□□ -0.4
ABCB1-201ENST00000265724 APAF1O14727 1248 aa12.52□□□□□ -0.4
ABCB1-201ENST00000265724 PLEKHH2Q8IVE3 1493 aa12.52□□□□□ -0.4
ABCB1-201ENST00000265724 MAGI1Q96QZ7 1491 aaPredicted RBP12.52□□□□□ -0.4
ABCB1-201ENST00000265724 ARHGEF11O15085 1522 aa12.52□□□□□ -0.41
ABCB1-201ENST00000265724 AMPHP49418 695 aa12.51□□□□□ -0.41
ABCB1-201ENST00000265724 TSHZ2Q9NRE2 1034 aa12.51□□□□□ -0.41
ABCB1-201ENST00000265724 PLIN1O60240 522 aa12.5□□□□□ -0.41
ABCB1-201ENST00000265724 APBB1O00213 710 aa12.5□□□□□ -0.41
ABCB1-201ENST00000265724 LTV1Q96GA3 475 aaPredicted RBP12.5□□□□□ -0.41
ABCB1-201ENST00000265724 ROCK1Q13464 1354 aa12.5□□□□□ -0.41
ABCB1-201ENST00000265724 RWDD1Q9H446 243 aaPredicted RBP12.5□□□□□ -0.41
ABCB1-201ENST00000265724 EIF5BO60841 1220 aaKnown RBP12.49□□□□□ -0.41
ABCB1-201ENST00000265724 RAPGEF3O95398 923 aa12.49□□□□□ -0.41
ABCB1-201ENST00000265724 WDR97A6NE52 1622 aa12.49□□□□□ -0.41
ABCB1-201ENST00000265724 TCERG1O14776 1098 aaKnown RBP12.49□□□□□ -0.41
ABCB1-201ENST00000265724 CSB-PGBD3P0DP91 1061 aa12.49□□□□□ -0.41
ABCB1-201ENST00000265724 COG3Q96JB2 828 aa12.49□□□□□ -0.41
ABCB1-201ENST00000265724 BCL2L13Q9BXK5 485 aa12.48□□□□□ -0.41
ABCB1-201ENST00000265724 ABCC5O15440 1437 aa12.48□□□□□ -0.41
ABCB1-201ENST00000265724 GOLGA6L22H0YM25 854 aa12.48□□□□□ -0.41
ABCB1-201ENST00000265724 PTPN23Q9H3S7 1636 aa12.47□□□□□ -0.41
ABCB1-201ENST00000265724 E9PSI1 815 aa12.46□□□□□ -0.41
ABCB1-201ENST00000265724 RRP1P56182 461 aaKnown RBP12.46□□□□□ -0.41
ABCB1-201ENST00000265724 LMOD3Q0VAK6 560 aa12.46□□□□□ -0.41
ABCB1-201ENST00000265724 CABP2Q9NPB3 220 aa12.46□□□□□ -0.41
ABCB1-201ENST00000265724 CAMSAP2Q08AD1 1489 aa12.46□□□□□ -0.42
ABCB1-201ENST00000265724 EXOC6Q8TAG9 804 aa12.46□□□□□ -0.42
ABCB1-201ENST00000265724 ELL2O00472 640 aaPredicted RBP12.46□□□□□ -0.42
ABCB1-201ENST00000265724 PRKCSHP14314 528 aaPredicted RBP12.45□□□□□ -0.42
ABCB1-201ENST00000265724 STK31Q9BXU1 1019 aa12.45□□□□□ -0.42
ABCB1-201ENST00000265724 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.45□□□□□ -0.42
ABCB1-201ENST00000265724 PMFBP1Q8TBY8 1022 aa12.45□□□□□ -0.42
ABCB1-201ENST00000265724 NCLP19338 710 aaKnown RBP12.44□□□□□ -0.42
ABCB1-201ENST00000265724 HSP90AB1P08238 724 aaKnown RBP12.44□□□□□ -0.42
ABCB1-201ENST00000265724 GGNBP2Q9H3C7 697 aa12.44□□□□□ -0.42
ABCB1-201ENST00000265724 CCDC141Q6ZP82 1450 aa12.44□□□□□ -0.42
ABCB1-201ENST00000265724 DIAPH1O60610 1272 aaKnown RBP12.43□□□□□ -0.42
ABCB1-201ENST00000265724 ANKRD30BQ9BXX2 1392 aa12.43□□□□□ -0.42
ABCB1-201ENST00000265724 CRBNQ96SW2 442 aa12.42□□□□□ -0.42
ABCB1-201ENST00000265724 BRD4O60885 1362 aaPredicted RBP12.42□□□□□ -0.42
ABCB1-201ENST00000265724 SLC4A10Q6U841 1118 aa12.42□□□□□ -0.42
ABCB1-201ENST00000265724 KCNJ4P48050 445 aa12.42□□□□□ -0.42
ABCB1-201ENST00000265724 ADAMTS8Q9UP79 889 aa12.42□□□□□ -0.42
ABCB1-201ENST00000265724 NCOA1Q15788 1441 aa12.41□□□□□ -0.42
ABCB1-201ENST00000265724 HSCBQ8IWL3 235 aa12.41□□□□□ -0.42
ABCB1-201ENST00000265724 SPRYD3Q8NCJ5 442 aa12.41□□□□□ -0.42
ABCB1-201ENST00000265724 AKNAQ7Z591 1439 aa12.41□□□□□ -0.42
ABCB1-201ENST00000265724 TPRNQ4KMQ1 711 aa12.41□□□□□ -0.42
ABCB1-201ENST00000265724 COG6Q9Y2V7 657 aa12.4□□□□□ -0.42
ABCB1-201ENST00000265724 SLC12A5Q9H2X9 1139 aa12.39□□□□□ -0.43
ABCB1-201ENST00000265724 THOC2Q8NI27 1593 aaKnown RBP12.39□□□□□ -0.43
ABCB1-201ENST00000265724 MTHFSP49914 203 aa12.39□□□□□ -0.43
ABCB1-201ENST00000265724 RUNDC1Q96C34 613 aa12.39□□□□□ -0.43
ABCB1-201ENST00000265724 RIPK4P57078 832 aa12.39□□□□□ -0.43
ABCB1-201ENST00000265724 NGEFQ8N5V2 710 aa12.39□□□□□ -0.43
ABCB1-201ENST00000265724 PPP2R1AP30153 589 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms