RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 HRCP23327 699 aa21.51■■□□□ 1.03
SSBP1-201ENST00000265304 MROH1Q8NDA8 1641 aa21.5■■□□□ 1.03
SSBP1-201ENST00000265304 ADAMTSL3P82987 1691 aa21.5■■□□□ 1.03
SSBP1-201ENST00000265304 ACIN1Q9UKV3 1341 aaKnown RBP21.49■■□□□ 1.03
SSBP1-201ENST00000265304 SETD5Q9C0A6 1442 aa21.47■■□□□ 1.03
SSBP1-201ENST00000265304 PRDM15P57071 1507 aaPredicted RBP21.47■■□□□ 1.03
SSBP1-201ENST00000265304 KDM5DQ9BY66 1539 aa21.47■■□□□ 1.03
SSBP1-201ENST00000265304 KIF3BO15066 747 aa21.47■■□□□ 1.03
SSBP1-201ENST00000265304 UNC13BO14795 1591 aa21.47■■□□□ 1.03
SSBP1-201ENST00000265304 VWDEQ8N2E2 1590 aa21.47■■□□□ 1.03
SSBP1-201ENST00000265304 ARID4BQ4LE39 1312 aaPredicted RBP21.41■■□□□ 1.02
SSBP1-201ENST00000265304 ZC3H13Q5T200 1668 aaKnown RBP21.4■■□□□ 1.02
SSBP1-201ENST00000265304 LMTK2Q8IWU2 1503 aa21.4■■□□□ 1.02
SSBP1-201ENST00000265304 MROH2AA6NES4 1674 aa21.39■■□□□ 1.01
SSBP1-201ENST00000265304 IQGAP3Q86VI3 1631 aa21.39■■□□□ 1.01
SSBP1-201ENST00000265304 CNTLNQ9NXG0 1405 aa21.38■■□□□ 1.01
SSBP1-201ENST00000265304 FER1L4A9Z1Z3 1794 aa21.38■■□□□ 1.01
SSBP1-201ENST00000265304 RAB3GAP2Q9H2M9 1393 aa21.37■■□□□ 1.01
SSBP1-201ENST00000265304 GGT6Q6P531 493 aa21.37■■□□□ 1.01
SSBP1-201ENST00000265304 ABCC3O15438 1527 aa21.36■■□□□ 1.01
SSBP1-201ENST00000265304 MADDQ8WXG6 1647 aa21.36■■□□□ 1.01
SSBP1-201ENST00000265304 KDM4FA0A1W2PPD8 638 aa21.34■■□□□ 1.01
SSBP1-201ENST00000265304 ARHGAP31Q2M1Z3 1444 aa21.33■■□□□ 1.01
SSBP1-201ENST00000265304 CLTCQ00610 1675 aaKnown RBP21.33■■□□□ 1
SSBP1-201ENST00000265304 KANK1Q14678 1352 aa21.33■■□□□ 1
SSBP1-201ENST00000265304 CEP152O94986 1710 aa21.32■■□□□ 1
SSBP1-201ENST00000265304 TET3O43151 1660 aa21.32■■□□□ 1
SSBP1-201ENST00000265304 SETD1BQ9UPS6 1966 aaKnown RBP21.32■■□□□ 1
SSBP1-201ENST00000265304 MLECQ14165 292 aa21.31■■□□□ 1
SSBP1-201ENST00000265304 NUP155O75694 1391 aa21.31■■□□□ 1
SSBP1-201ENST00000265304 WASHC2CQ9Y4E1 1318 aa21.3■■□□□ 1
SSBP1-201ENST00000265304 PZPP20742 1482 aa21.3■■□□□ 1
SSBP1-201ENST00000265304 CAMSAP1Q5T5Y3 1602 aa21.29■■□□□ 1
SSBP1-201ENST00000265304 RIMS1Q86UR5 1692 aaKnown RBP21.28■■□□□ 1
SSBP1-201ENST00000265304 ZMYM3Q14202 1370 aa21.28■■□□□ 1
SSBP1-201ENST00000265304 C3P01024 1663 aa21.28■■□□□ 1
SSBP1-201ENST00000265304 EFCAB6Q5THR3 1501 aa21.27■■□□□ 1
SSBP1-201ENST00000265304 RPRD2Q5VT52 1461 aaKnown RBP21.26■□□□□ 0.99
SSBP1-201ENST00000265304 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.26■□□□□ 0.995e-6■□□□□ 8.4
SSBP1-201ENST00000265304 PCGF6Q9BYE7 350 aa21.26■□□□□ 0.99
SSBP1-201ENST00000265304 PTPRMP28827 1452 aa21.26■□□□□ 0.99
SSBP1-201ENST00000265304 E9PCH4 1651 aa21.24■□□□□ 0.99
SSBP1-201ENST00000265304 NPATQ14207 1427 aa21.23■□□□□ 0.99
SSBP1-201ENST00000265304 ESF1Q9H501 851 aaKnown RBP21.23■□□□□ 0.99
SSBP1-201ENST00000265304 CFAP65Q6ZU64 1925 aaKnown RBP21.23■□□□□ 0.99
SSBP1-201ENST00000265304 TRIM52Q96A61 297 aa21.2■□□□□ 0.98
SSBP1-201ENST00000265304 MPHOSPH9Q99550 1183 aa21.2■□□□□ 0.98
SSBP1-201ENST00000265304 SPATA31D1Q6ZQQ2 1576 aa21.19■□□□□ 0.98
SSBP1-201ENST00000265304 NOS1P29475 1434 aa21.19■□□□□ 0.98
SSBP1-201ENST00000265304 PREX1Q8TCU6 1659 aa21.18■□□□□ 0.98
SSBP1-201ENST00000265304 PTPRTO14522 1441 aa21.18■□□□□ 0.98
SSBP1-201ENST00000265304 SLC4A1APQ9BWU0 796 aaKnown RBP21.17■□□□□ 0.98
SSBP1-201ENST00000265304 ERVK-7P63135 1459 aa21.15■□□□□ 0.98
SSBP1-201ENST00000265304 PKD2Q13563 968 aa21.14■□□□□ 0.97
SSBP1-201ENST00000265304 CEBPAP49715 358 aaPredicted RBP21.13■□□□□ 0.97
SSBP1-201ENST00000265304 PLA2R1Q13018 1463 aa21.13■□□□□ 0.97
SSBP1-201ENST00000265304 SPHKAPQ2M3C7 1700 aa21.12■□□□□ 0.97
SSBP1-201ENST00000265304 FBXO31Q5XUX0 539 aaPredicted RBP21.12■□□□□ 0.97
SSBP1-201ENST00000265304 SYNMO15061 1565 aa21.1■□□□□ 0.97
SSBP1-201ENST00000265304 PIK3C2BO00750 1634 aa21.1■□□□□ 0.97
SSBP1-201ENST00000265304 DHX57Q6P158 1386 aaKnown RBP21.09■□□□□ 0.97
SSBP1-201ENST00000265304 TRPM2O94759 1503 aa21.08■□□□□ 0.96
SSBP1-201ENST00000265304 SLC52A1Q9NWF4 448 aa21.07■□□□□ 0.96
SSBP1-201ENST00000265304 KDM5AP29375 1690 aaKnown RBP21.07■□□□□ 0.96
SSBP1-201ENST00000265304 TNRQ92752 1358 aa21.07■□□□□ 0.96
SSBP1-201ENST00000265304 ANKRD30BQ9BXX2 1392 aa21.07■□□□□ 0.96
SSBP1-201ENST00000265304 NLRP1Q9C000 1473 aa21.07■□□□□ 0.96
SSBP1-201ENST00000265304 ZNF142P52746 1687 aaPredicted RBP21.04■□□□□ 0.96
SSBP1-201ENST00000265304 MYO3AQ8NEV4 1616 aa21.02■□□□□ 0.96
SSBP1-201ENST00000265304 NEURL4Q96JN8 1562 aa21.01■□□□□ 0.95
SSBP1-201ENST00000265304 IDI1Q13907 227 aa21■□□□□ 0.95
SSBP1-201ENST00000265304 FOXD1Q16676 465 aa21■□□□□ 0.95
SSBP1-201ENST00000265304 A2ML1A8K2U0 1454 aa21■□□□□ 0.95
SSBP1-201ENST00000265304 CLTCL1P53675 1640 aa20.99■□□□□ 0.95
SSBP1-201ENST00000265304 CEP170BQ9Y4F5 1589 aaPredicted RBP20.97■□□□□ 0.95
SSBP1-201ENST00000265304 UBR1Q8IWV7 1749 aa20.97■□□□□ 0.95
SSBP1-201ENST00000265304 CLSPNQ9HAW4 1339 aa20.97■□□□□ 0.95
SSBP1-201ENST00000265304 KIF1BO60333 1816 aa20.97■□□□□ 0.95
SSBP1-201ENST00000265304 TMEM131LA2VDJ0 1609 aa20.96■□□□□ 0.95
SSBP1-201ENST00000265304 UHRF1BP1Q6BDS2 1440 aa20.95■□□□□ 0.95
SSBP1-201ENST00000265304 UGGT1Q9NYU2 1555 aa20.95■□□□□ 0.94
SSBP1-201ENST00000265304 LMTK3Q96Q04 1460 aa20.94■□□□□ 0.94
SSBP1-201ENST00000265304 MYO5BQ9ULV0 1848 aa20.94■□□□□ 0.94
SSBP1-201ENST00000265304 CCDC144AA2RUR9 1427 aa20.94■□□□□ 0.94
SSBP1-201ENST00000265304 ADGRB3O60242 1522 aa20.93■□□□□ 0.94
SSBP1-201ENST00000265304 SPATA31E1Q6ZUB1 1445 aa20.92■□□□□ 0.94
SSBP1-201ENST00000265304 SLIT1O75093 1534 aa20.89■□□□□ 0.94
SSBP1-201ENST00000265304 ARHGAP23Q9P227 1491 aa20.89■□□□□ 0.94
SSBP1-201ENST00000265304 PLPPR3Q6T4P5 718 aa20.89■□□□□ 0.93
SSBP1-201ENST00000265304 THEMISQ8N1K5 641 aaPredicted RBP20.89■□□□□ 0.93
SSBP1-201ENST00000265304 ZFYVE9O95405 1425 aa20.84■□□□□ 0.93
SSBP1-201ENST00000265304 TMEM2Q9UHN6 1383 aa20.84■□□□□ 0.93
SSBP1-201ENST00000265304 RPGRIP1LQ68CZ1 1315 aa20.83■□□□□ 0.93
SSBP1-201ENST00000265304 IFT172Q9UG01 1749 aa20.83■□□□□ 0.92
SSBP1-201ENST00000265304 PPLO60437 1756 aa20.81■□□□□ 0.92
SSBP1-201ENST00000265304 NEXMIFQ5QGS0 1516 aa20.8■□□□□ 0.92
SSBP1-201ENST00000265304 STAC3Q96MF2 364 aa20.8■□□□□ 0.92
SSBP1-201ENST00000265304 STRCQ7RTU9 1775 aa20.8■□□□□ 0.92
SSBP1-201ENST00000265304 MED14O60244 1454 aa20.78■□□□□ 0.92
SSBP1-201ENST00000265304 SIN3AQ96ST3 1273 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms