RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 ADGRL2O95490 1459 aa12.89□□□□□ -0.35
ERCC8-201ENST00000265038 ITGAEP38570 1179 aa12.89□□□□□ -0.35
ERCC8-201ENST00000265038 WASHC2CQ9Y4E1 1318 aa12.89□□□□□ -0.35
ERCC8-201ENST00000265038 ERBINQ96RT1 1412 aa12.88□□□□□ -0.35
ERCC8-201ENST00000265038 CROCC2H7BZ55 1655 aa12.88□□□□□ -0.35
ERCC8-201ENST00000265038 LMTK3Q96Q04 1460 aa12.87□□□□□ -0.35
ERCC8-201ENST00000265038 HSPA2P54652 639 aa12.86□□□□□ -0.35
ERCC8-201ENST00000265038 ROCK1Q13464 1354 aa12.86□□□□□ -0.35
ERCC8-201ENST00000265038 NPATQ14207 1427 aa12.84□□□□□ -0.35
ERCC8-201ENST00000265038 FBXO31Q5XUX0 539 aaPredicted RBP12.84□□□□□ -0.35
ERCC8-201ENST00000265038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.84□□□□□ -0.35
ERCC8-201ENST00000265038 KDM5DQ9BY66 1539 aa12.84□□□□□ -0.35
ERCC8-201ENST00000265038 ANKRD50Q9ULJ7 1429 aa12.84□□□□□ -0.35
ERCC8-201ENST00000265038 C3P01024 1663 aa12.83□□□□□ -0.35
ERCC8-201ENST00000265038 CLTCQ00610 1675 aaKnown RBP12.83□□□□□ -0.35
ERCC8-201ENST00000265038 EIF2AK4Q9P2K8 1649 aaKnown RBP12.83□□□□□ -0.35
ERCC8-201ENST00000265038 MROH1Q8NDA8 1641 aa12.83□□□□□ -0.36
ERCC8-201ENST00000265038 RNF17Q9BXT8 1623 aaKnown RBP12.83□□□□□ -0.36
ERCC8-201ENST00000265038 FAM135AQ9P2D6 1515 aa12.83□□□□□ -0.36
ERCC8-201ENST00000265038 UHRF1BP1Q6BDS2 1440 aa12.82□□□□□ -0.36
ERCC8-201ENST00000265038 MROH2AA6NES4 1674 aa12.82□□□□□ -0.36
ERCC8-201ENST00000265038 ABCC3O15438 1527 aa12.82□□□□□ -0.36
ERCC8-201ENST00000265038 PZPP20742 1482 aa12.8□□□□□ -0.36
ERCC8-201ENST00000265038 PRDM15P57071 1507 aaPredicted RBP12.79□□□□□ -0.36
ERCC8-201ENST00000265038 KANK1Q14678 1352 aa12.79□□□□□ -0.36
ERCC8-201ENST00000265038 TNRQ92752 1358 aa12.78□□□□□ -0.36
ERCC8-201ENST00000265038 ARHGAP31Q2M1Z3 1444 aa12.77□□□□□ -0.37
ERCC8-201ENST00000265038 DEPDC5O75140 1603 aa12.76□□□□□ -0.37
ERCC8-201ENST00000265038 PREX1Q8TCU6 1659 aa12.76□□□□□ -0.37
ERCC8-201ENST00000265038 VWDEQ8N2E2 1590 aa12.76□□□□□ -0.37
ERCC8-201ENST00000265038 LMTK2Q8IWU2 1503 aa12.75□□□□□ -0.37
ERCC8-201ENST00000265038 SETD1BQ9UPS6 1966 aaKnown RBP12.74□□□□□ -0.37
ERCC8-201ENST00000265038 ERVK-7P63135 1459 aa12.74□□□□□ -0.37
ERCC8-201ENST00000265038 NAIPQ13075 1403 aa12.74□□□□□ -0.37
ERCC8-201ENST00000265038 ZC3H13Q5T200 1668 aaKnown RBP12.73□□□□□ -0.37
ERCC8-201ENST00000265038 SPATA31D1Q6ZQQ2 1576 aa12.72□□□□□ -0.37
ERCC8-201ENST00000265038 NUP155O75694 1391 aa12.72□□□□□ -0.37
ERCC8-201ENST00000265038 A2ML1A8K2U0 1454 aa12.72□□□□□ -0.37
ERCC8-201ENST00000265038 HFM1A2PYH4 1435 aa12.71□□□□□ -0.37
ERCC8-201ENST00000265038 CAMSAP1Q5T5Y3 1602 aa12.71□□□□□ -0.37
ERCC8-201ENST00000265038 CEP152O94986 1710 aa12.71□□□□□ -0.37
ERCC8-201ENST00000265038 MYO3AQ8NEV4 1616 aa12.71□□□□□ -0.38
ERCC8-201ENST00000265038 NLRP1Q9C000 1473 aa12.7□□□□□ -0.38
ERCC8-201ENST00000265038 CEP170BQ9Y4F5 1589 aaPredicted RBP12.7□□□□□ -0.38
ERCC8-201ENST00000265038 NCKAP5LQ9HCH0 1330 aa12.7□□□□□ -0.38
ERCC8-201ENST00000265038 UNC13BO14795 1591 aa12.69□□□□□ -0.38
ERCC8-201ENST00000265038 NOS1P29475 1434 aa12.69□□□□□ -0.38
ERCC8-201ENST00000265038 IDI1Q13907 227 aa12.68□□□□□ -0.38
ERCC8-201ENST00000265038 THEMISQ8N1K5 641 aaPredicted RBP12.68□□□□□ -0.38
ERCC8-201ENST00000265038 DMRT2Q9Y5R5 561 aa12.68□□□□□ -0.38
ERCC8-201ENST00000265038 EFCAB6Q5THR3 1501 aa12.68□□□□□ -0.38
ERCC8-201ENST00000265038 PLA2R1Q13018 1463 aa12.67□□□□□ -0.38
ERCC8-201ENST00000265038 PKD2Q13563 968 aa12.67□□□□□ -0.38
ERCC8-201ENST00000265038 ZNF142P52746 1687 aaPredicted RBP12.66□□□□□ -0.38
ERCC8-201ENST00000265038 RPRD2Q5VT52 1461 aaKnown RBP12.66□□□□□ -0.38
ERCC8-201ENST00000265038 UGGT1Q9NYU2 1555 aa12.66□□□□□ -0.38
ERCC8-201ENST00000265038 TRIM52Q96A61 297 aa12.66□□□□□ -0.38
ERCC8-201ENST00000265038 SLC52A1Q9NWF4 448 aa12.65□□□□□ -0.38
ERCC8-201ENST00000265038 PTPRTO14522 1441 aa12.65□□□□□ -0.38
ERCC8-201ENST00000265038 STRCQ7RTU9 1775 aa12.65□□□□□ -0.39
ERCC8-201ENST00000265038 IQGAP3Q86VI3 1631 aa12.64□□□□□ -0.39
ERCC8-201ENST00000265038 ANKLE2Q86XL3 938 aa12.64□□□□□ -0.39
ERCC8-201ENST00000265038 TET3O43151 1660 aa12.63□□□□□ -0.39
ERCC8-201ENST00000265038 SYNMO15061 1565 aa12.63□□□□□ -0.39
ERCC8-201ENST00000265038 GCC2Q8IWJ2 1684 aa12.62□□□□□ -0.39
ERCC8-201ENST00000265038 STAG3Q9UJ98 1225 aa12.62□□□□□ -0.39
ERCC8-201ENST00000265038 SETD5Q9C0A6 1442 aa12.61□□□□□ -0.39
ERCC8-201ENST00000265038 LTKP29376 864 aa12.61□□□□□ -0.39
ERCC8-201ENST00000265038 SLC4A1APQ9BWU0 796 aaKnown RBP12.6□□□□□ -0.39
ERCC8-201ENST00000265038 TMEM2Q9UHN6 1383 aa12.59□□□□□ -0.39
ERCC8-201ENST00000265038 TXNDC2Q86VQ3 553 aa12.59□□□□□ -0.39
ERCC8-201ENST00000265038 CFAP65Q6ZU64 1925 aaKnown RBP12.59□□□□□ -0.39
ERCC8-201ENST00000265038 E9PCH4 1651 aa12.59□□□□□ -0.39
ERCC8-201ENST00000265038 ARHGAP23Q9P227 1491 aa12.58□□□□□ -0.4
ERCC8-201ENST00000265038 MPHOSPH9Q99550 1183 aa12.57□□□□□ -0.4
ERCC8-201ENST00000265038 PIK3C2BO00750 1634 aa12.57□□□□□ -0.4
ERCC8-201ENST00000265038 SLIT1O75093 1534 aa12.57□□□□□ -0.4
ERCC8-201ENST00000265038 RAB3GAP2Q9H2M9 1393 aa12.57□□□□□ -0.4
ERCC8-201ENST00000265038 NPHP4O75161 1426 aaPredicted RBP12.57□□□□□ -0.4
ERCC8-201ENST00000265038 MED14O60244 1454 aa12.57□□□□□ -0.4
ERCC8-201ENST00000265038 UBR1Q8IWV7 1749 aa12.57□□□□□ -0.4
ERCC8-201ENST00000265038 NEURL4Q96JN8 1562 aa12.56□□□□□ -0.4
ERCC8-201ENST00000265038 CHGAP10645 457 aaKnown RBP12.56□□□□□ -0.4
ERCC8-201ENST00000265038 EID1Q9Y6B2 187 aa12.56□□□□□ -0.4
ERCC8-201ENST00000265038 ZNF335Q9H4Z2 1342 aaPredicted RBP12.56□□□□□ -0.4
ERCC8-201ENST00000265038 FOXD1Q16676 465 aa12.55□□□□□ -0.4
ERCC8-201ENST00000265038 CERKQ8TCT0 537 aa12.55□□□□□ -0.4
ERCC8-201ENST00000265038 SCAF11Q99590 1463 aaKnown RBP12.55□□□□□ -0.4
ERCC8-201ENST00000265038 ADGRB3O60242 1522 aa12.54□□□□□ -0.4
ERCC8-201ENST00000265038 ACIN1Q9UKV3 1341 aaKnown RBP12.54□□□□□ -0.4
ERCC8-201ENST00000265038 HRCP23327 699 aa12.53□□□□□ -0.4
ERCC8-201ENST00000265038 LTBP4Q8N2S1 1624 aa12.52□□□□□ -0.41
ERCC8-201ENST00000265038 ZFYVE9O95405 1425 aa12.52□□□□□ -0.41
ERCC8-201ENST00000265038 RIMS2Q9UQ26 1411 aa12.51□□□□□ -0.41
ERCC8-201ENST00000265038 KDM5AP29375 1690 aaKnown RBP12.51□□□□□ -0.41
ERCC8-201ENST00000265038 TMEM131LA2VDJ0 1609 aa12.51□□□□□ -0.41
ERCC8-201ENST00000265038 HDGFP51858 240 aaKnown RBP12.5□□□□□ -0.41
ERCC8-201ENST00000265038 NUTM2DQ5VT03 806 aaPredicted RBP12.5□□□□□ -0.41
ERCC8-201ENST00000265038 TRPM2O94759 1503 aa12.5□□□□□ -0.41
ERCC8-201ENST00000265038 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms