RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 MYO3AQ8NEV4 1616 aa11.21□□□□□ -0.61
SMARCE1-201ENST00000264640 TRAPPC8Q9Y2L5 1435 aa11.21□□□□□ -0.61
SMARCE1-201ENST00000264640 MROH2AA6NES4 1674 aa11.2□□□□□ -0.62
SMARCE1-201ENST00000264640 NCKAP5LQ9HCH0 1330 aa11.2□□□□□ -0.62
SMARCE1-201ENST00000264640 ITSN2Q9NZM3 1697 aa11.2□□□□□ -0.62
SMARCE1-201ENST00000264640 LRRIQ1Q96JM4 1722 aa11.19□□□□□ -0.62
SMARCE1-201ENST00000264640 AFAP1Q8N556 730 aa11.19□□□□□ -0.62
SMARCE1-201ENST00000264640 CLTCQ00610 1675 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-201ENST00000264640 KIDINS220Q9ULH0 1771 aa11.18□□□□□ -0.62
SMARCE1-201ENST00000264640 ESF1Q9H501 851 aaKnown RBP11.18□□□□□ -0.62
SMARCE1-201ENST00000264640 AGLP35573 1532 aa11.18□□□□□ -0.62
SMARCE1-201ENST00000264640 HSPA1LP34931 641 aa11.17□□□□□ -0.62
SMARCE1-201ENST00000264640 EFCAB2Q5VUJ9 269 aa11.17□□□□□ -0.62
SMARCE1-201ENST00000264640 PIP4K2BP78356 416 aa11.16□□□□□ -0.62
SMARCE1-201ENST00000264640 CEP170BQ9Y4F5 1589 aaPredicted RBP11.16□□□□□ -0.62
SMARCE1-201ENST00000264640 POLR1AO95602 1720 aaPredicted RBP11.15□□□□□ -0.62
SMARCE1-201ENST00000264640 ABCC1P33527 1531 aa11.15□□□□□ -0.62
SMARCE1-201ENST00000264640 FARP1Q9Y4F1 1045 aaPredicted RBP11.15□□□□□ -0.62
SMARCE1-201ENST00000264640 PREX2Q70Z35 1606 aa11.15□□□□□ -0.62
SMARCE1-201ENST00000264640 MLH3Q9UHC1 1453 aa11.14□□□□□ -0.63
SMARCE1-201ENST00000264640 ATP1B4Q9UN42 357 aaPredicted RBP11.14□□□□□ -0.63
SMARCE1-201ENST00000264640 CNTLNQ9NXG0 1405 aa11.14□□□□□ -0.63
SMARCE1-201ENST00000264640 NPATQ14207 1427 aa11.13□□□□□ -0.63
SMARCE1-201ENST00000264640 TCOF1Q13428 1488 aaKnown RBP11.12□□□□□ -0.63
SMARCE1-201ENST00000264640 CDC42BPAQ5VT25 1732 aa11.12□□□□□ -0.63
SMARCE1-201ENST00000264640 PLA2R1Q13018 1463 aa11.12□□□□□ -0.63
SMARCE1-201ENST00000264640 CD44P16070 742 aaKnown RBP11.1□□□□□ -0.63
SMARCE1-201ENST00000264640 TROQ12816 1431 aaPredicted RBP11.09□□□□□ -0.63
SMARCE1-201ENST00000264640 ALKQ9UM73 1620 aa11.09□□□□□ -0.63
SMARCE1-201ENST00000264640 ZMYM3Q14202 1370 aa11.09□□□□□ -0.63
SMARCE1-201ENST00000264640 SAMD9LQ8IVG5 1584 aa11.08□□□□□ -0.64
SMARCE1-201ENST00000264640 NEURL4Q96JN8 1562 aa11.08□□□□□ -0.64
SMARCE1-201ENST00000264640 DNMT1P26358 1616 aaKnown RBP11.08□□□□□ -0.64
SMARCE1-201ENST00000264640 PKD2Q13563 968 aa11.07□□□□□ -0.64
SMARCE1-201ENST00000264640 CPS1P31327 1500 aa11.07□□□□□ -0.64
SMARCE1-201ENST00000264640 CLIP1P30622 1438 aa11.07□□□□□ -0.64
SMARCE1-201ENST00000264640 PTPRKQ15262 1439 aa11.07□□□□□ -0.64
SMARCE1-201ENST00000264640 SYCP2Q9BX26 1530 aa11.05□□□□□ -0.64
SMARCE1-201ENST00000264640 PLXNC1O60486 1568 aa11.05□□□□□ -0.64
SMARCE1-201ENST00000264640 TOM1O60784 492 aa11.05□□□□□ -0.64
SMARCE1-201ENST00000264640 STRCP1A6NGW2 1772 aa11.05□□□□□ -0.64
SMARCE1-201ENST00000264640 SHANK2Q9UPX8 1470 aa11.05□□□□□ -0.64
SMARCE1-201ENST00000264640 SETD1AO15047 1707 aaKnown RBP11.04□□□□□ -0.64
SMARCE1-201ENST00000264640 VWDEQ8N2E2 1590 aa11.04□□□□□ -0.64
SMARCE1-201ENST00000264640 INO80Q9ULG1 1556 aaPredicted RBP11.04□□□□□ -0.64
SMARCE1-201ENST00000264640 FMN1Q68DA7 1419 aa11.04□□□□□ -0.64
SMARCE1-201ENST00000264640 CLCN6P51797 869 aa11.04□□□□□ -0.64
SMARCE1-201ENST00000264640 LHX8Q68G74 356 aa11.04□□□□□ -0.64
SMARCE1-201ENST00000264640 EHMT2Q96KQ7 1210 aa11.04□□□□□ -0.64
SMARCE1-201ENST00000264640 CDK11AQ9UQ88 783 aaPredicted RBP11.04□□□□□ -0.64
SMARCE1-201ENST00000264640 ATP7AQ04656 1500 aa11.04□□□□□ -0.64
SMARCE1-201ENST00000264640 A2ML1A8K2U0 1454 aa11.03□□□□□ -0.64
SMARCE1-201ENST00000264640 ARHGAP35Q9NRY4 1499 aa11.02□□□□□ -0.65
SMARCE1-201ENST00000264640 POTEIP0CG38 1075 aa11.02□□□□□ -0.65
SMARCE1-201ENST00000264640 STAG3Q9UJ98 1225 aa11.02□□□□□ -0.65
SMARCE1-201ENST00000264640 LOC105371045A0A1W2PR82 267 aa11.01□□□□□ -0.65
SMARCE1-201ENST00000264640 HRCP23327 699 aa11.01□□□□□ -0.65
SMARCE1-201ENST00000264640 CREBZFQ9NS37 354 aa11.01□□□□□ -0.65
SMARCE1-201ENST00000264640 RNF17Q9BXT8 1623 aaKnown RBP11.01□□□□□ -0.65
SMARCE1-201ENST00000264640 ADGBQ8N7X0 1667 aa11.01□□□□□ -0.65
SMARCE1-201ENST00000264640 EEA1Q15075 1411 aa11□□□□□ -0.65
SMARCE1-201ENST00000264640 IQGAP1P46940 1657 aa10.99□□□□□ -0.65
SMARCE1-201ENST00000264640 RGS17Q9UGC6 210 aaPredicted RBP10.99□□□□□ -0.65
SMARCE1-201ENST00000264640 ZNF777Q9ULD5 760 aaPredicted RBP10.99□□□□□ -0.65
SMARCE1-201ENST00000264640 A2MP01023 1474 aa10.99□□□□□ -0.65
SMARCE1-201ENST00000264640 SPDYE4A6NLX3 237 aa10.98□□□□□ -0.65
SMARCE1-201ENST00000264640 GGT6Q6P531 493 aa10.98□□□□□ -0.65
SMARCE1-201ENST00000264640 PCGF6Q9BYE7 350 aa10.98□□□□□ -0.65
SMARCE1-201ENST00000264640 SPAG9O60271 1321 aaKnown RBP10.98□□□□□ -0.65
SMARCE1-201ENST00000264640 SYNMO15061 1565 aa10.97□□□□□ -0.65
SMARCE1-201ENST00000264640 XIRP1Q702N8 1843 aaKnown RBP10.97□□□□□ -0.65
SMARCE1-201ENST00000264640 ZNF579Q8NAF0 562 aaKnown RBP10.96□□□□□ -0.65
SMARCE1-201ENST00000264640 DEPDC5O75140 1603 aa10.95□□□□□ -0.66
SMARCE1-201ENST00000264640 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMARCE1-201ENST00000264640 HNRNPMP52272 730 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMARCE1-201ENST00000264640 TRIM26Q12899 539 aaPredicted RBP10.95□□□□□ -0.66
SMARCE1-201ENST00000264640 LRRC7Q96NW7 1537 aa10.94□□□□□ -0.66
SMARCE1-201ENST00000264640 CCDC18Q5T9S5 1454 aa10.93□□□□□ -0.66
SMARCE1-201ENST00000264640 NPHP4O75161 1426 aaPredicted RBP10.93□□□□□ -0.66
SMARCE1-201ENST00000264640 TNRQ92752 1358 aa10.93□□□□□ -0.66
SMARCE1-201ENST00000264640 FBXO31Q5XUX0 539 aaPredicted RBP10.93□□□□□ -0.66
SMARCE1-201ENST00000264640 ZC3H13Q5T200 1668 aaKnown RBP10.92□□□□□ -0.66
SMARCE1-201ENST00000264640 UGGT1Q9NYU2 1555 aa10.92□□□□□ -0.66
SMARCE1-201ENST00000264640 UBTFP17480 764 aaKnown RBP10.92□□□□□ -0.66
SMARCE1-201ENST00000264640 GPATCH8Q9UKJ3 1502 aaKnown RBP10.92□□□□□ -0.66
SMARCE1-201ENST00000264640 POTEAQ6S8J7 498 aa10.91□□□□□ -0.66
SMARCE1-201ENST00000264640 ZRANB1Q9UGI0 708 aa10.91□□□□□ -0.66
SMARCE1-201ENST00000264640 MED14O60244 1454 aa10.91□□□□□ -0.66
SMARCE1-201ENST00000264640 PZPP20742 1482 aa10.91□□□□□ -0.66
SMARCE1-201ENST00000264640 KDM5DQ9BY66 1539 aa10.9□□□□□ -0.66
SMARCE1-201ENST00000264640 ANKLE2Q86XL3 938 aa10.9□□□□□ -0.66
SMARCE1-201ENST00000264640 CASKIN1Q8WXD9 1431 aa10.89□□□□□ -0.67
SMARCE1-201ENST00000264640 CFAP65Q6ZU64 1925 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-201ENST00000264640 FAM135AQ9P2D6 1515 aa10.89□□□□□ -0.67
SMARCE1-201ENST00000264640 PLEKHH2Q8IVE3 1493 aa10.88□□□□□ -0.67
SMARCE1-201ENST00000264640 KIAA1107Q9UPP5 1409 aa10.87□□□□□ -0.67
SMARCE1-201ENST00000264640 ROBO1Q9Y6N7 1651 aa10.87□□□□□ -0.67
SMARCE1-201ENST00000264640 NLRP1Q9C000 1473 aa10.87□□□□□ -0.67
SMARCE1-201ENST00000264640 DCBLD2Q96PD2 775 aa10.86□□□□□ -0.67
SMARCE1-201ENST00000264640 UBR1Q8IWV7 1749 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms