RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 ITSN2Q9NZM3 1697 aa16.24■□□□□ 0.19
CHMP2B-201ENST00000263780 CRBNQ96SW2 442 aa16.24■□□□□ 0.19
CHMP2B-201ENST00000263780 TARBP1Q13395 1621 aaKnown RBP16.24■□□□□ 0.19
CHMP2B-201ENST00000263780 NUP153P49790 1475 aaKnown RBP16.23■□□□□ 0.19
CHMP2B-201ENST00000263780 ADAMTS12P58397 1594 aa16.22■□□□□ 0.19
CHMP2B-201ENST00000263780 BLMP54132 1417 aaPredicted RBP16.21■□□□□ 0.19
CHMP2B-201ENST00000263780 NUP155O75694 1391 aa16.21■□□□□ 0.19
CHMP2B-201ENST00000263780 FAM161AQ3B820 660 aa16.21■□□□□ 0.18
CHMP2B-201ENST00000263780 CDCA7LQ96GN5 454 aa16.21■□□□□ 0.18
CHMP2B-201ENST00000263780 PBRM1Q86U86 1689 aa16.2■□□□□ 0.18
CHMP2B-201ENST00000263780 RAPGEF6Q8TEU7 1601 aa16.2■□□□□ 0.18
CHMP2B-201ENST00000263780 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.19■□□□□ 0.18
CHMP2B-201ENST00000263780 KDM2AQ9Y2K7 1162 aa16.19■□□□□ 0.18
CHMP2B-201ENST00000263780 GPATCH8Q9UKJ3 1502 aaKnown RBP16.19■□□□□ 0.18
CHMP2B-201ENST00000263780 KDM2BQ8NHM5 1336 aa16.19■□□□□ 0.18
CHMP2B-201ENST00000263780 DCAF11Q8TEB1 546 aa16.19■□□□□ 0.18
CHMP2B-201ENST00000263780 BRPF3Q9ULD4 1205 aa16.19■□□□□ 0.18
CHMP2B-201ENST00000263780 CROCC2H7BZ55 1655 aa16.18■□□□□ 0.18
CHMP2B-201ENST00000263780 KDM5DQ9BY66 1539 aa16.18■□□□□ 0.18
CHMP2B-201ENST00000263780 PLIN1O60240 522 aa16.18■□□□□ 0.18
CHMP2B-201ENST00000263780 KIAA0586Q9BVV6 1533 aa16.18■□□□□ 0.18
CHMP2B-201ENST00000263780 KIAA0556O60303 1618 aa16.18■□□□□ 0.18
CHMP2B-201ENST00000263780 PER1O15534 1290 aaPredicted RBP16.18■□□□□ 0.18
CHMP2B-201ENST00000263780 FRAT1Q92837 279 aaPredicted RBP16.18■□□□□ 0.18
CHMP2B-201ENST00000263780 SHANK2Q9UPX8 1470 aa16.17■□□□□ 0.18
CHMP2B-201ENST00000263780 ZNF777Q9ULD5 760 aaPredicted RBP16.16■□□□□ 0.18
CHMP2B-201ENST00000263780 DISP1Q96F81 1524 aa16.15■□□□□ 0.18
CHMP2B-201ENST00000263780 PRG4Q92954 1404 aaPredicted RBP16.15■□□□□ 0.18
CHMP2B-201ENST00000263780 CEP170Q5SW79 1584 aa16.15■□□□□ 0.18
CHMP2B-201ENST00000263780 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.14■□□□□ 0.17
CHMP2B-201ENST00000263780 UBE2Q2Q8WVN8 375 aa16.14■□□□□ 0.17
CHMP2B-201ENST00000263780 ADCY10Q96PN6 1610 aa16.13■□□□□ 0.17
CHMP2B-201ENST00000263780 RSPH6AQ9H0K4 717 aa16.13■□□□□ 0.17
CHMP2B-201ENST00000263780 TSPY4P0CV99 314 aa16.12■□□□□ 0.17
CHMP2B-201ENST00000263780 TSPY10P0CW01 314 aa16.12■□□□□ 0.17
CHMP2B-201ENST00000263780 FAM43AQ8N2R8 423 aa16.12■□□□□ 0.17
CHMP2B-201ENST00000263780 PTPRGP23470 1445 aa16.12■□□□□ 0.17
CHMP2B-201ENST00000263780 GPRASP1Q5JY77 1395 aa16.11■□□□□ 0.17
CHMP2B-201ENST00000263780 C9orf84Q5VXU9 1444 aa16.11■□□□□ 0.17
CHMP2B-201ENST00000263780 C8orf34Q49A92 452 aa16.11■□□□□ 0.17
CHMP2B-201ENST00000263780 PRAG1Q86YV5 1406 aa16.1■□□□□ 0.17
CHMP2B-201ENST00000263780 COL17A1Q9UMD9 1497 aaPredicted RBP16.1■□□□□ 0.17
CHMP2B-201ENST00000263780 SLC4A3P48751 1232 aa16.1■□□□□ 0.17
CHMP2B-201ENST00000263780 CC2D1BQ5T0F9 858 aaKnown RBP16.09■□□□□ 0.17
CHMP2B-201ENST00000263780 EIF3AQ14152 1382 aaKnown RBP16.08■□□□□ 0.17
CHMP2B-201ENST00000263780 TMF1P82094 1093 aa16.08■□□□□ 0.16
CHMP2B-201ENST00000263780 C20orf194Q5TEA3 1177 aa16.07■□□□□ 0.16
CHMP2B-201ENST00000263780 PANK3Q9H999 370 aa16.07■□□□□ 0.16
CHMP2B-201ENST00000263780 LAMC1P11047 1609 aa16.07■□□□□ 0.16
CHMP2B-201ENST00000263780 TRPM1Q7Z4N2 1603 aa16.07■□□□□ 0.16
CHMP2B-201ENST00000263780 ZNF608Q9ULD9 1512 aaPredicted RBP16.07■□□□□ 0.16
CHMP2B-201ENST00000263780 GOLGA2Q08379 1002 aa16.06■□□□□ 0.16
CHMP2B-201ENST00000263780 WDR43Q15061 677 aaKnown RBP eCLIP16.06■□□□□ 0.16
CHMP2B-201ENST00000263780 SKAP1Q86WV1 359 aa16.06■□□□□ 0.16
CHMP2B-201ENST00000263780 FRAT2O75474 233 aaPredicted RBP16.06■□□□□ 0.16
CHMP2B-201ENST00000263780 DUSP27Q5VZP5 1158 aa16.06■□□□□ 0.16
CHMP2B-201ENST00000263780 CCDC144AA2RUR9 1427 aa16.06■□□□□ 0.16
CHMP2B-201ENST00000263780 EIF5BO60841 1220 aaKnown RBP16.05■□□□□ 0.16
CHMP2B-201ENST00000263780 EIF4G3O43432 1585 aaKnown RBP16.05■□□□□ 0.16
CHMP2B-201ENST00000263780 ERBINQ96RT1 1412 aa16.04■□□□□ 0.16
CHMP2B-201ENST00000263780 BECN1Q14457 450 aa16.04■□□□□ 0.16
CHMP2B-201ENST00000263780 ADAMTS8Q9UP79 889 aa16.04■□□□□ 0.16
CHMP2B-201ENST00000263780 PLEKHD1A6NEE1 506 aa16.03■□□□□ 0.16
CHMP2B-201ENST00000263780 TESK2Q96S53 571 aa16.03■□□□□ 0.16
CHMP2B-201ENST00000263780 L1TD1Q5T7N2 865 aaKnown RBP16.02■□□□□ 0.15
CHMP2B-201ENST00000263780 PRDM15P57071 1507 aaPredicted RBP16.02■□□□□ 0.15
CHMP2B-201ENST00000263780 ZNF521Q96K83 1311 aa16.01■□□□□ 0.15
CHMP2B-201ENST00000263780 DISP3Q9P2K9 1392 aa16.01■□□□□ 0.15
CHMP2B-201ENST00000263780 RSPH4AQ5TD94 716 aa16.01■□□□□ 0.15
CHMP2B-201ENST00000263780 NUP160Q12769 1436 aa16.01■□□□□ 0.15
CHMP2B-201ENST00000263780 NBPF1Q3BBV0 1214 aa16■□□□□ 0.15
CHMP2B-201ENST00000263780 EIF2AK4Q9P2K8 1649 aaKnown RBP16■□□□□ 0.15
CHMP2B-201ENST00000263780 RGS3P49796 1198 aa16■□□□□ 0.15
CHMP2B-201ENST00000263780 SLFN5Q08AF3 891 aa15.99■□□□□ 0.15
CHMP2B-201ENST00000263780 KNSTRNQ9Y448 316 aa15.99■□□□□ 0.15
CHMP2B-201ENST00000263780 CLASP1Q7Z460 1538 aa15.99■□□□□ 0.15
CHMP2B-201ENST00000263780 FAM135AQ9P2D6 1515 aa15.99■□□□□ 0.15
CHMP2B-201ENST00000263780 IFT140Q96RY7 1462 aa15.99■□□□□ 0.15
CHMP2B-201ENST00000263780 CDC42BPAQ5VT25 1732 aa15.99■□□□□ 0.15
CHMP2B-201ENST00000263780 ARHGEF5Q12774 1597 aa15.99■□□□□ 0.15
CHMP2B-201ENST00000263780 NGEFQ8N5V2 710 aa15.99■□□□□ 0.15
CHMP2B-201ENST00000263780 MAPK8IP3Q9UPT6 1336 aa15.99■□□□□ 0.15
CHMP2B-201ENST00000263780 CARMIL2Q6F5E8 1435 aa15.98■□□□□ 0.15
CHMP2B-201ENST00000263780 PLEKHH1Q9ULM0 1364 aa15.98■□□□□ 0.15
CHMP2B-201ENST00000263780 GRIN2AQ12879 1464 aa15.98■□□□□ 0.15
CHMP2B-201ENST00000263780 PLB1Q6P1J6 1458 aa15.98■□□□□ 0.15
CHMP2B-201ENST00000263780 PPP2R1AP30153 589 aa15.97■□□□□ 0.15
CHMP2B-201ENST00000263780 CDCA8Q53HL2 280 aa15.97■□□□□ 0.15
CHMP2B-201ENST00000263780 ABCC10Q5T3U5 1492 aa15.97■□□□□ 0.15
CHMP2B-201ENST00000263780 MRC2Q9UBG0 1479 aa15.96■□□□□ 0.15
CHMP2B-201ENST00000263780 TRMT2AQ8IZ69 625 aaKnown RBP15.96■□□□□ 0.15
CHMP2B-201ENST00000263780 NINLQ9Y2I6 1382 aa15.96■□□□□ 0.15
CHMP2B-201ENST00000263780 RGL3Q3MIN7 710 aa15.96■□□□□ 0.15
CHMP2B-201ENST00000263780 MAGI1Q96QZ7 1491 aaPredicted RBP15.96■□□□□ 0.14
CHMP2B-201ENST00000263780 CGNL1Q0VF96 1302 aa15.95■□□□□ 0.14
CHMP2B-201ENST00000263780 A2MP01023 1474 aa15.95■□□□□ 0.14
CHMP2B-201ENST00000263780 CCDC141Q6ZP82 1450 aa15.95■□□□□ 0.14
CHMP2B-201ENST00000263780 PIK3C2GO75747 1445 aa15.94■□□□□ 0.14
CHMP2B-201ENST00000263780 NKTRP30414 1462 aaKnown RBP15.93■□□□□ 0.14
CHMP2B-201ENST00000263780 E9PSI1 815 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms