RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 HMMRO75330 724 aa8.82□□□□□ -1
HERC2-201ENST00000261609 CRBNQ96SW2 442 aa8.82□□□□□ -1
HERC2-201ENST00000261609 CENPJQ9HC77 1338 aaPredicted RBP8.82□□□□□ -1
HERC2-201ENST00000261609 GOLGA6L19H0YKK7 550 aa8.82□□□□□ -1
HERC2-201ENST00000261609 PATL2C9JE40 543 aaKnown RBP8.82□□□□□ -1
HERC2-201ENST00000261609 FOXD4L6Q3SYB3 417 aaPredicted RBP8.82□□□□□ -1
HERC2-201ENST00000261609 FOXD4L3Q6VB84 417 aaPredicted RBP8.82□□□□□ -1
HERC2-201ENST00000261609 FRAT2O75474 233 aaPredicted RBP8.81□□□□□ -1
HERC2-201ENST00000261609 HOMER1Q86YM7 354 aa8.81□□□□□ -1
HERC2-201ENST00000261609 RTF1Q92541 710 aaKnown RBP8.81□□□□□ -1
HERC2-201ENST00000261609 IFT57Q9NWB7 429 aa8.81□□□□□ -1
HERC2-201ENST00000261609 HMGN5P82970 282 aaKnown RBP8.81□□□□□ -1
HERC2-201ENST00000261609 U2AF1L5P0DN76 240 aaPredicted RBP8.8□□□□□ -1
HERC2-201ENST00000261609 U2AF1Q01081 240 aaKnown RBP eCLIP8.8□□□□□ -16e-7■□□□□ 9.4
HERC2-201ENST00000261609 BCL11BQ9C0K0 894 aaPredicted RBP8.8□□□□□ -1
HERC2-201ENST00000261609 NOL8Q76FK4 1167 aaKnown RBP8.8□□□□□ -1
HERC2-201ENST00000261609 SMC4Q9NTJ3 1288 aa8.8□□□□□ -1
HERC2-201ENST00000261609 BECN2A8MW95 431 aa8.8□□□□□ -1
HERC2-201ENST00000261609 RRP1P56182 461 aaKnown RBP8.8□□□□□ -1
HERC2-201ENST00000261609 RDXP35241 583 aaKnown RBP8.8□□□□□ -1
HERC2-201ENST00000261609 KANK1Q14678 1352 aa8.8□□□□□ -1
HERC2-201ENST00000261609 ARGLU1Q9NWB6 273 aaPredicted RBP8.79□□□□□ -1
HERC2-201ENST00000261609 TRIM6-TRIM34B2RNG4 842 aa8.79□□□□□ -1
HERC2-201ENST00000261609 CCDC70Q6NSX1 233 aa8.79□□□□□ -1
HERC2-201ENST00000261609 ATP6V1DQ9Y5K8 247 aa8.79□□□□□ -1
HERC2-201ENST00000261609 KIF15Q9NS87 1388 aa8.79□□□□□ -1
HERC2-201ENST00000261609 RRP12Q5JTH9 1297 aaKnown RBP8.79□□□□□ -1
HERC2-201ENST00000261609 TSR1Q2NL82 804 aaKnown RBP8.79□□□□□ -1
HERC2-201ENST00000261609 HSP90B1P14625 803 aaKnown RBP8.79□□□□□ -1
HERC2-201ENST00000261609 MSH5O43196 834 aa8.79□□□□□ -1
HERC2-201ENST00000261609 TAF7LQ5H9L4 462 aa8.79□□□□□ -1
HERC2-201ENST00000261609 EIF3AQ14152 1382 aaKnown RBP8.79□□□□□ -1
HERC2-201ENST00000261609 CCDC173Q0VFZ6 552 aa8.79□□□□□ -1
HERC2-201ENST00000261609 MCTP1Q6DN14 999 aa8.78□□□□□ -1
HERC2-201ENST00000261609 UQCRHLA0A096LP55 91 aa8.78□□□□□ -1
HERC2-201ENST00000261609 UQCRHP07919 91 aa8.78□□□□□ -1
HERC2-201ENST00000261609 CHMP4AQ9BY43 222 aa8.78□□□□□ -1
HERC2-201ENST00000261609 NPHP1O15259 732 aa8.77□□□□□ -1
HERC2-201ENST00000261609 CLSTN1O94985 981 aa8.77□□□□□ -1
HERC2-201ENST00000261609 ESPNB1AK53 854 aa8.77□□□□□ -1.01
HERC2-201ENST00000261609 SF3A1Q15459 793 aaKnown RBP8.77□□□□□ -1.01
HERC2-201ENST00000261609 AK7Q96M32 723 aa8.77□□□□□ -1.01
HERC2-201ENST00000261609 KIF3AQ9Y496 699 aa8.77□□□□□ -1.01
HERC2-201ENST00000261609 NUCB2P80303 420 aa8.77□□□□□ -1.01
HERC2-201ENST00000261609 PKD2Q13563 968 aa8.77□□□□□ -1.01
HERC2-201ENST00000261609 HSP90B2PQ58FF3 399 aa8.77□□□□□ -1.01
HERC2-201ENST00000261609 MPHOSPH9Q99550 1183 aa8.77□□□□□ -1.01
HERC2-201ENST00000261609 CLUAP1Q96AJ1 413 aa8.76□□□□□ -1.01
HERC2-201ENST00000261609 PDCL3Q9H2J4 239 aa8.76□□□□□ -1.01
HERC2-201ENST00000261609 DEF6Q9H4E7 631 aa8.76□□□□□ -1.01
HERC2-201ENST00000261609 SRPK2P78362 688 aaKnown RBP8.76□□□□□ -1.01
HERC2-201ENST00000261609 ANKRD45Q5TZF3 282 aa8.76□□□□□ -1.01
HERC2-201ENST00000261609 HDAC5Q9UQL6 1122 aa8.76□□□□□ -1.01
HERC2-201ENST00000261609 FOXD1Q16676 465 aa8.76□□□□□ -1.01
HERC2-201ENST00000261609 HDGFL2Q7Z4V5 671 aaPredicted RBP8.76□□□□□ -1.01
HERC2-201ENST00000261609 MNS1Q8NEH6 495 aa8.76□□□□□ -1.01
HERC2-201ENST00000261609 PRDM10Q9NQV6 1147 aa8.76□□□□□ -1.01
HERC2-201ENST00000261609 TPD52L1Q16890 204 aaPredicted RBP8.75□□□□□ -1.01
HERC2-201ENST00000261609 KANK4Q5T7N3 995 aaPredicted RBP8.75□□□□□ -1.01
HERC2-201ENST00000261609 RNF214Q8ND24 703 aa8.75□□□□□ -1.01
HERC2-201ENST00000261609 H3BQV1 296 aa8.75□□□□□ -1.01
HERC2-201ENST00000261609 IFFO2Q5TF58 517 aa8.75□□□□□ -1.01
HERC2-201ENST00000261609 CHMP3Q9Y3E7 222 aa8.75□□□□□ -1.01
HERC2-201ENST00000261609 MYBBP1AQ9BQG0 1328 aaKnown RBP8.75□□□□□ -1.01
HERC2-201ENST00000261609 CCDC146Q8IYE0 955 aa8.75□□□□□ -1.01
HERC2-201ENST00000261609 STK31Q9BXU1 1019 aa8.75□□□□□ -1.01
HERC2-201ENST00000261609 HSP90AB3PQ58FF7 597 aa8.75□□□□□ -1.01
HERC2-201ENST00000261609 ACBD3Q9H3P7 528 aa8.74□□□□□ -1.01
HERC2-201ENST00000261609 LMOD3Q0VAK6 560 aa8.74□□□□□ -1.01
HERC2-201ENST00000261609 CGNL1Q0VF96 1302 aa8.74□□□□□ -1.01
HERC2-201ENST00000261609 CHMP4CQ96CF2 233 aa8.73□□□□□ -1.01
HERC2-201ENST00000261609 C22orf23Q9BZE7 217 aa8.73□□□□□ -1.01
HERC2-201ENST00000261609 LEKR1Q6ZMV7 388 aa8.73□□□□□ -1.01
HERC2-201ENST00000261609 BBXQ8WY36 941 aaPredicted RBP8.73□□□□□ -1.01
HERC2-201ENST00000261609 H0YHG0 523 aa8.73□□□□□ -1.01
HERC2-201ENST00000261609 BAZ1BQ9UIG0 1483 aaKnown RBP8.73□□□□□ -1.01
HERC2-201ENST00000261609 TPM1P09493 284 aa8.73□□□□□ -1.01
HERC2-201ENST00000261609 SOGA1O94964 1423 aa8.73□□□□□ -1.01
HERC2-201ENST00000261609 GRPEL1Q9HAV7 217 aa8.73□□□□□ -1.01
HERC2-201ENST00000261609 SKIDA1Q1XH10 827 aa8.72□□□□□ -1.01
HERC2-201ENST00000261609 ERICH4A6NGS2 130 aa8.72□□□□□ -1.01
HERC2-201ENST00000261609 CARMIL1Q5VZK9 1371 aa8.72□□□□□ -1.01
HERC2-201ENST00000261609 E9PSI1 815 aa8.72□□□□□ -1.01
HERC2-201ENST00000261609 TSPY26PQ9H489 355 aa8.71□□□□□ -1.01
HERC2-201ENST00000261609 CBX1P83916 185 aa8.71□□□□□ -1.01
HERC2-201ENST00000261609 REC8O95072 547 aa8.71□□□□□ -1.01
HERC2-201ENST00000261609 FMN1Q68DA7 1419 aa8.71□□□□□ -1.01
HERC2-201ENST00000261609 ZKSCAN2Q63HK3 967 aa8.71□□□□□ -1.01
HERC2-201ENST00000261609 CAVIN1Q6NZI2 390 aaKnown RBP8.71□□□□□ -1.01
HERC2-201ENST00000261609 ZHX1Q9UKY1 873 aaPredicted RBP8.71□□□□□ -1.01
HERC2-201ENST00000261609 LMOD2Q6P5Q4 547 aa8.71□□□□□ -1.01
HERC2-201ENST00000261609 LETM1O95202 739 aaPredicted RBP8.71□□□□□ -1.02
HERC2-201ENST00000261609 FBXW7Q969H0 707 aa8.71□□□□□ -1.02
HERC2-201ENST00000261609 GORABQ5T7V8 394 aa8.71□□□□□ -1.02
HERC2-201ENST00000261609 ISY1Q9ULR0 285 aaKnown RBP8.71□□□□□ -1.02
HERC2-201ENST00000261609 SPAG9O60271 1321 aaKnown RBP8.71□□□□□ -1.02
HERC2-201ENST00000261609 PLCD4Q9BRC7 762 aa8.7□□□□□ -1.02
HERC2-201ENST00000261609 PES1O00541 588 aaKnown RBP8.7□□□□□ -1.02
HERC2-201ENST00000261609 RASSF8Q8NHQ8 419 aa8.7□□□□□ -1.02
HERC2-201ENST00000261609 SASS6Q6UVJ0 657 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms