RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 MIA2Q96PC5 1412 aa22.56■■□□□ 1.2
NDFIP1-201ENST00000253814 MORC1Q86VD1 984 aa22.55■■□□□ 1.2
NDFIP1-201ENST00000253814 ERCC6Q03468 1493 aa22.55■■□□□ 1.2
NDFIP1-201ENST00000253814 EPRSP07814 1512 aaKnown RBP22.55■■□□□ 1.2
NDFIP1-201ENST00000253814 CFAP53Q96M91 514 aa22.55■■□□□ 1.2
NDFIP1-201ENST00000253814 ARID4BQ4LE39 1312 aaPredicted RBP22.55■■□□□ 1.2
NDFIP1-201ENST00000253814 BRPF3Q9ULD4 1205 aa22.54■■□□□ 1.2
NDFIP1-201ENST00000253814 COG6Q9Y2V7 657 aa22.54■■□□□ 1.2
NDFIP1-201ENST00000253814 KIAA1107Q9UPP5 1409 aa22.53■■□□□ 1.2
NDFIP1-201ENST00000253814 DNMBPQ6XZF7 1577 aa22.52■■□□□ 1.2
NDFIP1-201ENST00000253814 C20orf194Q5TEA3 1177 aa22.5■■□□□ 1.19
NDFIP1-201ENST00000253814 ANP32BQ92688 251 aaKnown RBP22.49■■□□□ 1.19
NDFIP1-201ENST00000253814 NAP1L5Q96NT1 182 aaPredicted RBP22.49■■□□□ 1.19
NDFIP1-201ENST00000253814 RPRD2Q5VT52 1461 aaKnown RBP22.49■■□□□ 1.19
NDFIP1-201ENST00000253814 ABCC5O15440 1437 aa22.49■■□□□ 1.19
NDFIP1-201ENST00000253814 CENPJQ9HC77 1338 aaPredicted RBP22.47■■□□□ 1.19
NDFIP1-201ENST00000253814 STAG3Q9UJ98 1225 aa22.47■■□□□ 1.19
NDFIP1-201ENST00000253814 CC2D2AQ9P2K1 1620 aa22.46■■□□□ 1.19
NDFIP1-201ENST00000253814 U2AF1L5P0DN76 240 aaPredicted RBP22.45■■□□□ 1.18
NDFIP1-201ENST00000253814 U2AF1Q01081 240 aaKnown RBP eCLIP22.45■■□□□ 1.18
NDFIP1-201ENST00000253814 FRAT2O75474 233 aaPredicted RBP22.44■■□□□ 1.18
NDFIP1-201ENST00000253814 TRIM44Q96DX7 344 aaPredicted RBP22.44■■□□□ 1.18
NDFIP1-201ENST00000253814 MFAP1P55081 439 aaKnown RBP22.43■■□□□ 1.18
NDFIP1-201ENST00000253814 MAPK8IP3Q9UPT6 1336 aa22.42■■□□□ 1.18
NDFIP1-201ENST00000253814 PANK1Q8TE04 598 aa22.41■■□□□ 1.18
NDFIP1-201ENST00000253814 CFAP43Q8NDM7 1665 aa22.41■■□□□ 1.18
NDFIP1-201ENST00000253814 NCLP19338 710 aaKnown RBP22.41■■□□□ 1.18
NDFIP1-201ENST00000253814 HECW1Q76N89 1606 aa22.41■■□□□ 1.18
NDFIP1-201ENST00000253814 BCAR3O75815 825 aa22.4■■□□□ 1.18
NDFIP1-201ENST00000253814 KIF3BO15066 747 aa22.4■■□□□ 1.18
NDFIP1-201ENST00000253814 NUTM2DQ5VT03 806 aaPredicted RBP22.39■■□□□ 1.18
NDFIP1-201ENST00000253814 ROCK1Q13464 1354 aa22.39■■□□□ 1.17
NDFIP1-201ENST00000253814 GRIN2BQ13224 1484 aa22.38■■□□□ 1.17
NDFIP1-201ENST00000253814 SNAPC4Q5SXM2 1469 aa22.38■■□□□ 1.17
NDFIP1-201ENST00000253814 TRAK1Q9UPV9 953 aa22.38■■□□□ 1.17
NDFIP1-201ENST00000253814 PPP2R1AP30153 589 aa22.37■■□□□ 1.17
NDFIP1-201ENST00000253814 EFCAB2Q5VUJ9 269 aa22.36■■□□□ 1.17
NDFIP1-201ENST00000253814 ITPRIPQ8IWB1 547 aa22.36■■□□□ 1.17
NDFIP1-201ENST00000253814 HSP90AB1P08238 724 aaKnown RBP22.36■■□□□ 1.17
NDFIP1-201ENST00000253814 GGT6Q6P531 493 aa22.35■■□□□ 1.17
NDFIP1-201ENST00000253814 STK26Q9P289 416 aa22.35■■□□□ 1.17
NDFIP1-201ENST00000253814 CUL7Q14999 1698 aa22.35■■□□□ 1.17
NDFIP1-201ENST00000253814 RSPH4AQ5TD94 716 aa22.35■■□□□ 1.17
NDFIP1-201ENST00000253814 RWDD1Q9H446 243 aaPredicted RBP22.35■■□□□ 1.17
NDFIP1-201ENST00000253814 HSCBQ8IWL3 235 aa22.35■■□□□ 1.17
NDFIP1-201ENST00000253814 E9PSI1 815 aa22.34■■□□□ 1.17
NDFIP1-201ENST00000253814 THOC2Q8NI27 1593 aaKnown RBP22.34■■□□□ 1.17
NDFIP1-201ENST00000253814 TROQ12816 1431 aaPredicted RBP22.34■■□□□ 1.17
NDFIP1-201ENST00000253814 C9orf84Q5VXU9 1444 aa22.34■■□□□ 1.17
NDFIP1-201ENST00000253814 MYH16Q9H6N6 1097 aa22.34■■□□□ 1.17
NDFIP1-201ENST00000253814 UGGT2Q9NYU1 1516 aa22.33■■□□□ 1.17
NDFIP1-201ENST00000253814 NPM1P06748 294 aaKnown RBP eCLIP22.33■■□□□ 1.17
NDFIP1-201ENST00000253814 GLIPR1L2Q4G1C9 344 aa22.32■■□□□ 1.16
NDFIP1-201ENST00000253814 L1TD1Q5T7N2 865 aaKnown RBP22.32■■□□□ 1.16
NDFIP1-201ENST00000253814 FOXD4L1Q9NU39 408 aa22.32■■□□□ 1.16
NDFIP1-201ENST00000253814 SMC4Q9NTJ3 1288 aa22.32■■□□□ 1.16
NDFIP1-201ENST00000253814 URB2Q14146 1524 aaKnown RBP22.32■■□□□ 1.16
NDFIP1-201ENST00000253814 SRPK2P78362 688 aaKnown RBP22.32■■□□□ 1.16
NDFIP1-201ENST00000253814 PMFBP1Q8TBY8 1022 aa22.32■■□□□ 1.16
NDFIP1-201ENST00000253814 TPRNQ4KMQ1 711 aa22.31■■□□□ 1.16
NDFIP1-201ENST00000253814 SPAG9O60271 1321 aaKnown RBP22.3■■□□□ 1.16
NDFIP1-201ENST00000253814 DHX29Q7Z478 1369 aaKnown RBP22.3■■□□□ 1.16
NDFIP1-201ENST00000253814 CGNL1Q0VF96 1302 aa22.29■■□□□ 1.16
NDFIP1-201ENST00000253814 PTPRGP23470 1445 aa22.29■■□□□ 1.16
NDFIP1-201ENST00000253814 KANK1Q14678 1352 aa22.28■■□□□ 1.16
NDFIP1-201ENST00000253814 IQGAP2Q13576 1575 aa22.27■■□□□ 1.16
NDFIP1-201ENST00000253814 POGKQ9P215 609 aa22.26■■□□□ 1.15
NDFIP1-201ENST00000253814 GOLGA6L22H0YM25 854 aa22.26■■□□□ 1.15
NDFIP1-201ENST00000253814 CAMSAP2Q08AD1 1489 aa22.26■■□□□ 1.15
NDFIP1-201ENST00000253814 PLB1Q6P1J6 1458 aa22.26■■□□□ 1.15
NDFIP1-201ENST00000253814 GOLGA6L3A6NEY3 463 aa22.25■■□□□ 1.15
NDFIP1-201ENST00000253814 APBB1O00213 710 aa22.25■■□□□ 1.15
NDFIP1-201ENST00000253814 EIF3AQ14152 1382 aaKnown RBP22.23■■□□□ 1.15
NDFIP1-201ENST00000253814 CFAP70Q5T0N1 1121 aa22.23■■□□□ 1.15
NDFIP1-201ENST00000253814 PNNQ9H307 717 aaKnown RBP22.23■■□□□ 1.15
NDFIP1-201ENST00000253814 PLPPR3Q6T4P5 718 aa22.21■■□□□ 1.15
NDFIP1-201ENST00000253814 WASHC2CQ9Y4E1 1318 aa22.19■■□□□ 1.14
NDFIP1-201ENST00000253814 ERBINQ96RT1 1412 aa22.19■■□□□ 1.14
NDFIP1-201ENST00000253814 ELL2O00472 640 aaPredicted RBP22.18■■□□□ 1.14
NDFIP1-201ENST00000253814 AFAP1Q8N556 730 aa22.18■■□□□ 1.14
NDFIP1-201ENST00000253814 CTTNBP2Q8WZ74 1663 aa22.18■■□□□ 1.14
NDFIP1-201ENST00000253814 ARHGEF11O15085 1522 aa22.18■■□□□ 1.14
NDFIP1-201ENST00000253814 DISP3Q9P2K9 1392 aa22.16■■□□□ 1.14
NDFIP1-201ENST00000253814 KDM6BO15054 1643 aa22.16■■□□□ 1.14
NDFIP1-201ENST00000253814 DUSP27Q5VZP5 1158 aa22.16■■□□□ 1.14
NDFIP1-201ENST00000253814 TCP11L2Q8N4U5 519 aa22.16■■□□□ 1.14
NDFIP1-201ENST00000253814 MAGI3Q5TCQ9 1506 aa22.15■■□□□ 1.14
NDFIP1-201ENST00000253814 SLFN5Q08AF3 891 aa22.14■■□□□ 1.14
NDFIP1-201ENST00000253814 ZKSCAN2Q63HK3 967 aa22.14■■□□□ 1.13
NDFIP1-201ENST00000253814 TMEM132EQ6IEE7 984 aa22.14■■□□□ 1.13
NDFIP1-201ENST00000253814 TEX14Q8IWB6 1497 aa22.14■■□□□ 1.13
NDFIP1-201ENST00000253814 TCOF1Q13428 1488 aaKnown RBP22.13■■□□□ 1.13
NDFIP1-201ENST00000253814 RNF123Q5XPI4 1314 aa22.13■■□□□ 1.13
NDFIP1-201ENST00000253814 SOX12O15370 315 aa22.12■■□□□ 1.13
NDFIP1-201ENST00000253814 PDZRN3Q9UPQ7 1066 aa22.12■■□□□ 1.13
NDFIP1-201ENST00000253814 KIAA0586Q9BVV6 1533 aa22.12■■□□□ 1.13
NDFIP1-201ENST00000253814 MTHFSP49914 203 aa22.11■■□□□ 1.13
NDFIP1-201ENST00000253814 ZBTB7CA1YPR0 619 aa22.11■■□□□ 1.13
NDFIP1-201ENST00000253814 IPO8O15397 1037 aaKnown RBP22.11■■□□□ 1.13
NDFIP1-201ENST00000253814 SLC12A5Q9H2X9 1139 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms